RNA–Protein interactions for RNA: ENST00000556353.1

PRPF39-209, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 687 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-209ENST00000556353 M0R2Z0 102 aa2.89□□□□□ -1.95
PRPF39-209ENST00000556353 UPK1BO75841 260 aa2.89□□□□□ -1.95
PRPF39-209ENST00000556353 MOSP00540 346 aa2.89□□□□□ -1.95
PRPF39-209ENST00000556353 BGLAPP02818 100 aa2.89□□□□□ -1.95
PRPF39-209ENST00000556353 CD2P06729 351 aa2.89□□□□□ -1.95
PRPF39-209ENST00000556353 PFN1P07737 140 aaKnown RBP2.89□□□□□ -1.95
PRPF39-209ENST00000556353 SCTP09683 121 aa2.89□□□□□ -1.95
PRPF39-209ENST00000556353 OR5AL1P0C617 328 aa2.89□□□□□ -1.95
PRPF39-209ENST00000556353 OR5AC1P0C628 307 aa2.89□□□□□ -1.95
PRPF39-209ENST00000556353 ZNF14P17017 642 aaPredicted RBP2.89□□□□□ -1.95
PRPF39-209ENST00000556353 S100A3P33764 101 aa2.89□□□□□ -1.95
PRPF39-209ENST00000556353 GLRXP35754 106 aa2.89□□□□□ -1.95
PRPF39-209ENST00000556353 TGFBR1P36897 503 aa2.89□□□□□ -1.95
PRPF39-209ENST00000556353 TFPI2P48307 235 aa2.89□□□□□ -1.95
PRPF39-209ENST00000556353 SNRPD2P62316 118 aaKnown RBP2.89□□□□□ -1.95
PRPF39-209ENST00000556353 HIST1H1AQ02539 215 aaPredicted RBP2.89□□□□□ -1.95
PRPF39-209ENST00000556353 EGFEM1PQ0D2K5 195 aa2.89□□□□□ -1.95
PRPF39-209ENST00000556353 RAB40BQ12829 278 aa2.89□□□□□ -1.95
PRPF39-209ENST00000556353 CEACAM16Q2WEN9 425 aa2.89□□□□□ -1.95
PRPF39-209ENST00000556353 ZNF404Q494X3 552 aa2.89□□□□□ -1.95
PRPF39-209ENST00000556353 SPRNQ5BIV9 151 aa2.89□□□□□ -1.95
PRPF39-209ENST00000556353 PAGE3Q5JUK9 113 aa2.89□□□□□ -1.95
PRPF39-209ENST00000556353 C10orf91Q5T1B1 145 aa2.89□□□□□ -1.95
PRPF39-209ENST00000556353 FAM27D1Q5T7N8 215 aa2.89□□□□□ -1.95
PRPF39-209ENST00000556353 ARL9Q6T311 187 aa2.89□□□□□ -1.95
PRPF39-209ENST00000556353 OR8I2Q8N0Y5 310 aa2.89□□□□□ -1.95
PRPF39-209ENST00000556353 OR4S1Q8NGB4 309 aa2.89□□□□□ -1.95
PRPF39-209ENST00000556353 OR52P1PQ8NH57 321 aa2.89□□□□□ -1.95
PRPF39-209ENST00000556353 MFSD8Q8NHS3 518 aa2.89□□□□□ -1.95
PRPF39-209ENST00000556353 RAB2BQ8WUD1 216 aa2.89□□□□□ -1.95
PRPF39-209ENST00000556353 MBD3L1Q8WWY6 194 aa2.89□□□□□ -1.95
PRPF39-209ENST00000556353 OR5P3Q8WZ94 311 aa2.89□□□□□ -1.95
PRPF39-209ENST00000556353 GALNT14Q96FL9 552 aa2.89□□□□□ -1.95
PRPF39-209ENST00000556353 TMEM101Q96IK0 257 aa2.89□□□□□ -1.95
PRPF39-209ENST00000556353 TSPAN32Q96QS1 320 aa2.89□□□□□ -1.95
PRPF39-209ENST00000556353 S100A13Q99584 98 aa2.89□□□□□ -1.95
PRPF39-209ENST00000556353 EMC6Q9BV81 110 aa2.89□□□□□ -1.95
PRPF39-209ENST00000556353 LPAR5Q9H1C0 372 aa2.89□□□□□ -1.95
PRPF39-209ENST00000556353 ZNF442Q9H7R0 627 aa2.89□□□□□ -1.95
PRPF39-209ENST00000556353 KLF12Q9Y4X4 402 aa2.89□□□□□ -1.95
PRPF39-209ENST00000556353 RFNGQ9Y644 331 aa2.89□□□□□ -1.95
PRPF39-209ENST00000556353 FRAS1Q86XX4 4008 aa2.89□□□□□ -1.95
PRPF39-209ENST00000556353 KIAA2026Q5HYC2 2103 aa2.89□□□□□ -1.95
PRPF39-209ENST00000556353 IGKV1D-43A0A0B4J1Z2 117 aa2.88□□□□□ -1.95
PRPF39-209ENST00000556353 LYRM9A8MSI8 78 aa2.88□□□□□ -1.95
PRPF39-209ENST00000556353 H3BMQ9 156 aa2.88□□□□□ -1.95
PRPF39-209ENST00000556353 J3QRK9 145 aa2.88□□□□□ -1.95
PRPF39-209ENST00000556353 NME4O00746 187 aa2.88□□□□□ -1.95
PRPF39-209ENST00000556353 PDCD5O14737 125 aa2.88□□□□□ -1.95
PRPF39-209ENST00000556353 HSD17B6O14756 317 aa2.88□□□□□ -1.95
PRPF39-209ENST00000556353 MRPS12O15235 138 aaKnown RBP2.88□□□□□ -1.95
PRPF39-209ENST00000556353 COL8A2P25067 703 aa2.88□□□□□ -1.95
PRPF39-209ENST00000556353 AQP1P29972 269 aa2.88□□□□□ -1.95
PRPF39-209ENST00000556353 BLVRBP30043 206 aaPredicted RBP2.88□□□□□ -1.95
PRPF39-209ENST00000556353 G6PCP35575 357 aa2.88□□□□□ -1.95
PRPF39-209ENST00000556353 GPR6P46095 362 aaPredicted RBP2.88□□□□□ -1.95
PRPF39-209ENST00000556353 CRISP3P54108 245 aa2.88□□□□□ -1.95
PRPF39-209ENST00000556353 PPP1CBP62140 327 aa2.88□□□□□ -1.95
PRPF39-209ENST00000556353 RPS25P62851 125 aaKnown RBP2.88□□□□□ -1.95
PRPF39-209ENST00000556353 SLC35A2P78381 396 aa2.88□□□□□ -1.95
PRPF39-209ENST00000556353 PEA15Q15121 130 aa2.88□□□□□ -1.95
PRPF39-209ENST00000556353 FAM74A1Q5RGS3 127 aa2.88□□□□□ -1.95
PRPF39-209ENST00000556353 OR10K2Q6IF99 312 aa2.88□□□□□ -1.95
PRPF39-209ENST00000556353 EPGNQ6UW88 154 aa2.88□□□□□ -1.95
PRPF39-209ENST00000556353 SSX8Q7RTT4 187 aa2.88□□□□□ -1.95
PRPF39-209ENST00000556353 C20orf196Q8IYI0 205 aa2.88□□□□□ -1.95
PRPF39-209ENST00000556353 ZNF664Q8N3J9 261 aa2.88□□□□□ -1.95
PRPF39-209ENST00000556353 PNKDQ8N490 385 aa2.88□□□□□ -1.95
PRPF39-209ENST00000556353 OR11H6Q8NGC7 330 aa2.88□□□□□ -1.95
PRPF39-209ENST00000556353 OR4K5Q8NGD3 323 aa2.88□□□□□ -1.95
PRPF39-209ENST00000556353 OR51A2Q8NGJ7 313 aa2.88□□□□□ -1.95
PRPF39-209ENST00000556353 OR1N2Q8NGR9 330 aa2.88□□□□□ -1.95
PRPF39-209ENST00000556353 OR2G3Q8NGZ4 309 aa2.88□□□□□ -1.95
PRPF39-209ENST00000556353 OR1L1Q8NH94 360 aa2.88□□□□□ -1.95
PRPF39-209ENST00000556353 CLDND2Q8NHS1 167 aa2.88□□□□□ -1.95
PRPF39-209ENST00000556353 RXFP4Q8TDU9 374 aa2.88□□□□□ -1.95
PRPF39-209ENST00000556353 ZMYND19Q96E35 227 aaPredicted RBP2.88□□□□□ -1.95
PRPF39-209ENST00000556353 MCHR1Q99705 422 aa2.88□□□□□ -1.95
PRPF39-209ENST00000556353 SPANXDQ9BXN6 97 aa2.88□□□□□ -1.95
PRPF39-209ENST00000556353 OR2J1Q9GZK6 312 aa2.88□□□□□ -1.95
PRPF39-209ENST00000556353 TMEM133Q9H2Q1 129 aa2.88□□□□□ -1.95
PRPF39-209ENST00000556353 FBXL15Q9H469 300 aa2.88□□□□□ -1.95
PRPF39-209ENST00000556353 BCL2L10Q9HD36 194 aa2.88□□□□□ -1.95
PRPF39-209ENST00000556353 TAS2R5Q9NYW4 299 aa2.88□□□□□ -1.95
PRPF39-209ENST00000556353 EPPK1P58107 5090 aaKnown RBP2.87□□□□□ -1.95
PRPF39-209ENST00000556353 TET2Q6N021 2002 aaPredicted RBP2.87□□□□□ -1.95
PRPF39-209ENST00000556353 HYDINQ4G0P3 5121 aa2.87□□□□□ -1.95
PRPF39-209ENST00000556353 IGLV3-9A0A075B6K5 115 aa2.87□□□□□ -1.95
PRPF39-209ENST00000556353 TRBV6-6A0A0A6YYG2 114 aa2.87□□□□□ -1.95
PRPF39-209ENST00000556353 IGHV7-81A0A0B4J1V7 117 aa2.87□□□□□ -1.95
PRPF39-209ENST00000556353 A0A0U1RQV1 116 aa2.87□□□□□ -1.95
PRPF39-209ENST00000556353 LOC102725191A0A1B0GVB3 256 aa2.87□□□□□ -1.95
PRPF39-209ENST00000556353 OR5B21A6NL26 309 aa2.87□□□□□ -1.95
PRPF39-209ENST00000556353 COLCA2A8K830 154 aa2.87□□□□□ -1.95
PRPF39-209ENST00000556353 H7C1C5 153 aa2.87□□□□□ -1.95
PRPF39-209ENST00000556353 FXYD1O00168 92 aa2.87□□□□□ -1.95
PRPF39-209ENST00000556353 EDF1O60869 148 aaKnown RBP2.87□□□□□ -1.95
PRPF39-209ENST00000556353 KRTAP5-8O75690 187 aa2.87□□□□□ -1.95
PRPF39-209ENST00000556353 IGHG2P01859 326 aa2.87□□□□□ -1.95
PRPF39-209ENST00000556353 APOC3P02656 99 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms