RNA–Protein interactions for RNA: ENST00000556343.1

ACTN1-218, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 274 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-218ENST00000556343 ATF4P18848 351 aaPredicted RBP7.05□□□□□ -1.28
ACTN1-218ENST00000556343 FHITP49789 147 aa7.05□□□□□ -1.28
ACTN1-218ENST00000556343 KRTAP10-3P60369 221 aa7.05□□□□□ -1.28
ACTN1-218ENST00000556343 FHL3Q13643 280 aa7.05□□□□□ -1.28
ACTN1-218ENST00000556343 GUK1Q16774 197 aa7.05□□□□□ -1.28
ACTN1-218ENST00000556343 TM4SF20Q53R12 229 aa7.05□□□□□ -1.28
ACTN1-218ENST00000556343 SAMD13Q5VXD3 122 aa7.05□□□□□ -1.28
ACTN1-218ENST00000556343 UNQ9165/PRO28630Q6UXU0 137 aa7.05□□□□□ -1.28
ACTN1-218ENST00000556343 OR9G4Q8NGQ1 327 aa7.05□□□□□ -1.28
ACTN1-218ENST00000556343 UHRF2Q96PU4 802 aa7.05□□□□□ -1.28
ACTN1-218ENST00000556343 NKX6-2Q9C056 277 aaPredicted RBP7.05□□□□□ -1.28
ACTN1-218ENST00000556343 SMPXQ9UHP9 88 aa7.05□□□□□ -1.28
ACTN1-218ENST00000556343 U3KQE9 123 aa7.05□□□□□ -1.28
ACTN1-218ENST00000556343 IGHV3OR16-8A0A075B7F1 116 aa7.04□□□□□ -1.28
ACTN1-218ENST00000556343 NMBP08949 121 aa7.04□□□□□ -1.28
ACTN1-218ENST00000556343 GCHFRP30047 84 aa7.04□□□□□ -1.28
ACTN1-218ENST00000556343 PAFAH1B2P68402 229 aa7.04□□□□□ -1.28
ACTN1-218ENST00000556343 PMS2P11Q13670 270 aa7.04□□□□□ -1.28
ACTN1-218ENST00000556343 ZNF726P1Q15940 193 aa7.04□□□□□ -1.28
ACTN1-218ENST00000556343 NDUFA5Q16718 116 aa7.04□□□□□ -1.28
ACTN1-218ENST00000556343 SPATA31B1PQ5VZV4 182 aa7.04□□□□□ -1.28
ACTN1-218ENST00000556343 C16orf54Q6UWD8 224 aa7.04□□□□□ -1.28
ACTN1-218ENST00000556343 DYNLRB2Q8TF09 96 aa7.04□□□□□ -1.28
ACTN1-218ENST00000556343 DLX4Q92988 240 aaPredicted RBP7.04□□□□□ -1.28
ACTN1-218ENST00000556343 DUX3Q96PT4 197 aa7.04□□□□□ -1.28
ACTN1-218ENST00000556343 TXNDC17Q9BRA2 123 aa7.04□□□□□ -1.28
ACTN1-218ENST00000556343 RHPN1-AS1Q9BWJ2 59 aa7.04□□□□□ -1.28
ACTN1-218ENST00000556343 SCRT1Q9BWW7 348 aa7.04□□□□□ -1.28
ACTN1-218ENST00000556343 SLC25A2Q9BXI2 301 aa7.04□□□□□ -1.28
ACTN1-218ENST00000556343 MANBALQ9NQG1 85 aa7.04□□□□□ -1.28
ACTN1-218ENST00000556343 ATRQ13535 2644 aa7.04□□□□□ -1.28
ACTN1-218ENST00000556343 TRAV5A0A0B4J249 113 aa7.03□□□□□ -1.28
ACTN1-218ENST00000556343 A0A1B0GV50 99 aa7.03□□□□□ -1.28
ACTN1-218ENST00000556343 C2orf70A6NJV1 201 aa7.03□□□□□ -1.28
ACTN1-218ENST00000556343 ADARB2-AS1A8MUL3 147 aa7.03□□□□□ -1.28
ACTN1-218ENST00000556343 CHEK1O14757 476 aa7.03□□□□□ -1.28
ACTN1-218ENST00000556343 HMGB3O15347 200 aaKnown RBP7.03□□□□□ -1.28
ACTN1-218ENST00000556343 NBEAP1P0C6P0 100 aa7.03□□□□□ -1.28
ACTN1-218ENST00000556343 ARL14EPLP0DKL9 152 aa7.03□□□□□ -1.28
ACTN1-218ENST00000556343 FOLR2P14207 255 aa7.03□□□□□ -1.28
ACTN1-218ENST00000556343 CBLN1P23435 193 aa7.03□□□□□ -1.28
ACTN1-218ENST00000556343 FGF8P55075 233 aaPredicted RBP7.03□□□□□ -1.28
ACTN1-218ENST00000556343 RIPPLY3P57055 190 aa7.03□□□□□ -1.28
ACTN1-218ENST00000556343 RPL11P62913 178 aaKnown RBP7.03□□□□□ -1.28
ACTN1-218ENST00000556343 UBE2L3P68036 154 aaKnown RBP7.03□□□□□ -1.28
ACTN1-218ENST00000556343 SIGLEC15Q6ZMC9 328 aa7.03□□□□□ -1.28
ACTN1-218ENST00000556343 LURAP1LQ8IV03 231 aa7.03□□□□□ -1.28
ACTN1-218ENST00000556343 LYPD6BQ8NI32 183 aa7.03□□□□□ -1.28
ACTN1-218ENST00000556343 SUN5Q8TC36 379 aa7.03□□□□□ -1.28
ACTN1-218ENST00000556343 MCRIP2Q9BUT9 160 aaKnown RBP7.03□□□□□ -1.28
ACTN1-218ENST00000556343 CLEC5AQ9NY25 188 aa7.03□□□□□ -1.28
ACTN1-218ENST00000556343 SIGLEC8Q9NYZ4 499 aa7.03□□□□□ -1.28
ACTN1-218ENST00000556343 IGHV3-49A0A0A0MS15 119 aa7.02□□□□□ -1.29
ACTN1-218ENST00000556343 IGHV3-66A0A0C4DH42 116 aa7.02□□□□□ -1.29
ACTN1-218ENST00000556343 TMEM213A2RRL7 107 aa7.02□□□□□ -1.29
ACTN1-218ENST00000556343 DNASE2O00115 360 aaPredicted RBP7.02□□□□□ -1.29
ACTN1-218ENST00000556343 OR10J4P0C629 311 aa7.02□□□□□ -1.29
ACTN1-218ENST00000556343 ID1P41134 155 aa7.02□□□□□ -1.29
ACTN1-218ENST00000556343 PSG9Q00887 426 aa7.02□□□□□ -1.29
ACTN1-218ENST00000556343 PDE6HQ13956 83 aa7.02□□□□□ -1.29
ACTN1-218ENST00000556343 PEA15Q15121 130 aa7.02□□□□□ -1.29
ACTN1-218ENST00000556343 LEMD1Q68G75 181 aa7.02□□□□□ -1.29
ACTN1-218ENST00000556343 RBPMS2Q6ZRY4 209 aaKnown RBP7.02□□□□□ -1.29
ACTN1-218ENST00000556343 LYPD1Q8N2G4 141 aa7.02□□□□□ -1.29
ACTN1-218ENST00000556343 PCNPQ8WW12 178 aaKnown RBP7.02□□□□□ -1.29
ACTN1-218ENST00000556343 FAM167A-AS1Q96KT0 104 aa7.02□□□□□ -1.29
ACTN1-218ENST00000556343 EIF5A2Q9GZV4 153 aaKnown RBP7.02□□□□□ -1.29
ACTN1-218ENST00000556343 SMDT1Q9H4I9 107 aa7.02□□□□□ -1.29
ACTN1-218ENST00000556343 MED9Q9NWA0 146 aa7.02□□□□□ -1.29
ACTN1-218ENST00000556343 GNG13Q9P2W3 67 aa7.02□□□□□ -1.29
ACTN1-218ENST00000556343 ARL2-SNX15V9GYD0 113 aa7.02□□□□□ -1.29
ACTN1-218ENST00000556343 IGHV3OR16-13A0A075B7E8 117 aa7.01□□□□□ -1.29
ACTN1-218ENST00000556343 A0A087X0K7 114 aa7.01□□□□□ -1.29
ACTN1-218ENST00000556343 IGHV3-74A0A0B4J1X5 117 aa7.01□□□□□ -1.29
ACTN1-218ENST00000556343 TRAV25A0A0B4J276 109 aa7.01□□□□□ -1.29
ACTN1-218ENST00000556343 A0A1W2PRE2 83 aa7.01□□□□□ -1.29
ACTN1-218ENST00000556343 RAB19A4D1S5 217 aa7.01□□□□□ -1.29
ACTN1-218ENST00000556343 RBFOX3A6NFN3 312 aa7.01□□□□□ -1.29
ACTN1-218ENST00000556343 F6UZH7 168 aa7.01□□□□□ -1.29
ACTN1-218ENST00000556343 APOHP02749 345 aaPredicted RBP7.01□□□□□ -1.29
ACTN1-218ENST00000556343 CSN3P07498 182 aa7.01□□□□□ -1.29
ACTN1-218ENST00000556343 GP9P14770 177 aa7.01□□□□□ -1.29
ACTN1-218ENST00000556343 INSL3P51460 131 aa7.01□□□□□ -1.29
ACTN1-218ENST00000556343 MORN5Q5VZ52 161 aa7.01□□□□□ -1.29
ACTN1-218ENST00000556343 CST9LP1Q5W188 147 aa7.01□□□□□ -1.29
ACTN1-218ENST00000556343 HIST2H2BDQ6DRA6 164 aa7.01□□□□□ -1.29
ACTN1-218ENST00000556343 SSX7Q7RTT5 188 aa7.01□□□□□ -1.29
ACTN1-218ENST00000556343 TCF24Q7RTU0 167 aa7.01□□□□□ -1.29
ACTN1-218ENST00000556343 OR2K2Q8NGT1 345 aa7.01□□□□□ -1.29
ACTN1-218ENST00000556343 BLNKQ8WV28 456 aa7.01□□□□□ -1.29
ACTN1-218ENST00000556343 GLMPQ8WWB7 406 aa7.01□□□□□ -1.29
ACTN1-218ENST00000556343 FXYD5Q96DB9 178 aa7.01□□□□□ -1.29
ACTN1-218ENST00000556343 ZNF414Q96IQ9 312 aa7.01□□□□□ -1.29
ACTN1-218ENST00000556343 SLC50A1Q9BRV3 221 aa7.01□□□□□ -1.29
ACTN1-218ENST00000556343 GPR61Q9BZJ8 451 aa7.01□□□□□ -1.29
ACTN1-218ENST00000556343 AAMDCQ9H7C9 122 aa7.01□□□□□ -1.29
ACTN1-218ENST00000556343 VAX2Q9UIW0 290 aa7.01□□□□□ -1.29
ACTN1-218ENST00000556343 LINC00862A6NCI5 91 aa7□□□□□ -1.29
ACTN1-218ENST00000556343 ZNF253O75346 499 aa7□□□□□ -1.29
ACTN1-218ENST00000556343 SAP30O75446 220 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms