RNA–Protein interactions for RNA: ENST00000556305.1

CDKN3-210, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 3

Gene CDKN3, Length 712 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-210ENST00000556305 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.45□□□□□ -2.184e-9■■■■■ 29.4
CDKN3-210ENST00000556305 hCG_1818297A0A087WSY0 165 aa1.45□□□□□ -2.18
CDKN3-210ENST00000556305 TMEM212A6NML5 194 aa1.45□□□□□ -2.18
CDKN3-210ENST00000556305 A8MT66 165 aa1.45□□□□□ -2.18
CDKN3-210ENST00000556305 CLPSP04118 112 aa1.45□□□□□ -2.18
CDKN3-210ENST00000556305 C8GP07360 202 aa1.45□□□□□ -2.18
CDKN3-210ENST00000556305 G6PCP35575 357 aa1.45□□□□□ -2.18
CDKN3-210ENST00000556305 DEFA1P59665 94 aa1.45□□□□□ -2.18
CDKN3-210ENST00000556305 ZNF846Q147U1 533 aa1.45□□□□□ -2.18
CDKN3-210ENST00000556305 SIGLECL1Q8N7X8 197 aa1.45□□□□□ -2.18
CDKN3-210ENST00000556305 OR51A2Q8NGJ7 313 aa1.45□□□□□ -2.18
CDKN3-210ENST00000556305 TRABDQ9H4I3 376 aa1.45□□□□□ -2.18
CDKN3-210ENST00000556305 TP73-AS1Q9UF72 201 aa1.45□□□□□ -2.18
CDKN3-210ENST00000556305 ARL2BPQ9Y2Y0 163 aa1.45□□□□□ -2.18
CDKN3-210ENST00000556305 MYH11P35749 1972 aa1.45□□□□□ -2.18
CDKN3-210ENST00000556305 DOCK5Q9H7D0 1870 aa1.44□□□□□ -2.18
CDKN3-210ENST00000556305 RICTORQ6R327 1708 aa1.44□□□□□ -2.18
CDKN3-210ENST00000556305 TMEM210A6NLX4 147 aa1.44□□□□□ -2.18
CDKN3-210ENST00000556305 FADS1O60427 444 aa1.44□□□□□ -2.18
CDKN3-210ENST00000556305 HAND1O96004 215 aa1.44□□□□□ -2.18
CDKN3-210ENST00000556305 CDC42P60953 191 aa1.44□□□□□ -2.18
CDKN3-210ENST00000556305 Q6ZQT0 140 aa1.44□□□□□ -2.18
CDKN3-210ENST00000556305 TVP23BQ9NYZ1 205 aa1.44□□□□□ -2.18
CDKN3-210ENST00000556305 PRDM15P57071 1507 aaPredicted RBP1.44□□□□□ -2.18
CDKN3-210ENST00000556305 NEBP20929 6669 aa1.44□□□□□ -2.18
CDKN3-210ENST00000556305 DEPDC5O75140 1603 aa1.44□□□□□ -2.18
CDKN3-210ENST00000556305 DMXL2Q8TDJ6 3036 aa1.43□□□□□ -2.18
CDKN3-210ENST00000556305 HMCN1Q96RW7 5635 aa1.43□□□□□ -2.18
CDKN3-210ENST00000556305 APCP25054 2843 aa1.43□□□□□ -2.18
CDKN3-210ENST00000556305 ATMQ13315 3056 aa1.43□□□□□ -2.18
CDKN3-210ENST00000556305 BUB1B-PAK6H3BSN5 160 aa1.43□□□□□ -2.18
CDKN3-210ENST00000556305 OR7C1O76099 320 aaPredicted RBP1.43□□□□□ -2.18
CDKN3-210ENST00000556305 BAALC-AS2P0C853 105 aa1.43□□□□□ -2.18
CDKN3-210ENST00000556305 SPI1P17947 270 aa1.43□□□□□ -2.18
CDKN3-210ENST00000556305 TMED2Q15363 201 aa1.43□□□□□ -2.18
CDKN3-210ENST00000556305 C12orf74Q32Q52 190 aa1.43□□□□□ -2.18
CDKN3-210ENST00000556305 C10orf55Q5SWW7 151 aa1.43□□□□□ -2.18
CDKN3-210ENST00000556305 LYRM7Q5U5X0 104 aa1.43□□□□□ -2.18
CDKN3-210ENST00000556305 GNPDA2Q8TDQ7 276 aa1.43□□□□□ -2.18
CDKN3-210ENST00000556305 CHMP6Q96FZ7 201 aa1.43□□□□□ -2.18
CDKN3-210ENST00000556305 PRAP1Q96NZ9 151 aa1.43□□□□□ -2.18
CDKN3-210ENST00000556305 SIGMAR1Q99720 223 aa1.43□□□□□ -2.18
CDKN3-210ENST00000556305 SLC50A1Q9BRV3 221 aa1.43□□□□□ -2.18
CDKN3-210ENST00000556305 TLNRD1Q9H1K6 362 aa1.43□□□□□ -2.18
CDKN3-210ENST00000556305 UQCC1Q9NVA1 299 aa1.43□□□□□ -2.18
CDKN3-210ENST00000556305 C14orf105Q9NVL8 296 aa1.43□□□□□ -2.18
CDKN3-210ENST00000556305 TAS2R4Q9NYW5 299 aa1.43□□□□□ -2.18
CDKN3-210ENST00000556305 SLIT1O75093 1534 aa1.43□□□□□ -2.18
CDKN3-210ENST00000556305 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP1.43□□□□□ -2.18
CDKN3-210ENST00000556305 PCDH15Q96QU1 1955 aa1.43□□□□□ -2.18
CDKN3-210ENST00000556305 PKD1L3Q7Z443 1732 aa1.43□□□□□ -2.18
CDKN3-210ENST00000556305 FMN2Q9NZ56 1722 aa1.43□□□□□ -2.18
CDKN3-210ENST00000556305 A2ML1A8K2U0 1454 aa1.43□□□□□ -2.18
CDKN3-210ENST00000556305 CSPG4Q6UVK1 2322 aa1.43□□□□□ -2.18
CDKN3-210ENST00000556305 CCDC88CQ9P219 2028 aa1.42□□□□□ -2.18
CDKN3-210ENST00000556305 PIK3C2GO75747 1445 aa1.42□□□□□ -2.18
CDKN3-210ENST00000556305 LAMA5O15230 3695 aa1.42□□□□□ -2.18
CDKN3-210ENST00000556305 EFCAB5A4FU69 1503 aa1.42□□□□□ -2.18
CDKN3-210ENST00000556305 A0A087X0T9 212 aa1.42□□□□□ -2.18
CDKN3-210ENST00000556305 C7orf71A4D174 169 aa1.42□□□□□ -2.18
CDKN3-210ENST00000556305 ZNF682O95780 498 aa1.42□□□□□ -2.18
CDKN3-210ENST00000556305 CTXN2P0C2S0 81 aa1.42□□□□□ -2.18
CDKN3-210ENST00000556305 LYNX1P0DP58 116 aa1.42□□□□□ -2.18
CDKN3-210ENST00000556305 CRYGAP11844 174 aa1.42□□□□□ -2.18
CDKN3-210ENST00000556305 FKBP2P26885 142 aaKnown RBP1.42□□□□□ -2.18
CDKN3-210ENST00000556305 BRS3P32247 399 aa1.42□□□□□ -2.18
CDKN3-210ENST00000556305 SURF2Q15527 256 aaPredicted RBP1.42□□□□□ -2.18
CDKN3-210ENST00000556305 LIN52Q52LA3 116 aa1.42□□□□□ -2.18
CDKN3-210ENST00000556305 Q6Q795 121 aa1.42□□□□□ -2.18
CDKN3-210ENST00000556305 Q8N2B8 174 aa1.42□□□□□ -2.18
CDKN3-210ENST00000556305 FAM172AQ8WUF8 416 aa1.42□□□□□ -2.18
CDKN3-210ENST00000556305 AQP3Q92482 292 aa1.42□□□□□ -2.18
CDKN3-210ENST00000556305 REG4Q9BYZ8 158 aa1.42□□□□□ -2.18
CDKN3-210ENST00000556305 CRCT1Q9UGL9 99 aa1.42□□□□□ -2.18
CDKN3-210ENST00000556305 FREM1Q5H8C1 2179 aa1.42□□□□□ -2.18
CDKN3-210ENST00000556305 PZPP20742 1482 aa1.42□□□□□ -2.18
CDKN3-210ENST00000556305 MLH3Q9UHC1 1453 aa1.42□□□□□ -2.18
CDKN3-210ENST00000556305 ADGRB1O14514 1584 aa1.42□□□□□ -2.18
CDKN3-210ENST00000556305 UGGT1Q9NYU2 1555 aa1.42□□□□□ -2.18
CDKN3-210ENST00000556305 CSMD2Q7Z408 3487 aa1.42□□□□□ -2.18
CDKN3-210ENST00000556305 NEXMIFQ5QGS0 1516 aa1.41□□□□□ -2.18
CDKN3-210ENST00000556305 DCHS2Q6V1P9 2916 aa1.41□□□□□ -2.18
CDKN3-210ENST00000556305 OR2J2O76002 312 aa1.41□□□□□ -2.18
CDKN3-210ENST00000556305 PROSCO94903 275 aa1.41□□□□□ -2.18
CDKN3-210ENST00000556305 IFNA6P05013 189 aa1.41□□□□□ -2.18
CDKN3-210ENST00000556305 CTSDP07339 412 aaPredicted RBP1.41□□□□□ -2.18
CDKN3-210ENST00000556305 ASAH2BP0C7U1 165 aa1.41□□□□□ -2.18
CDKN3-210ENST00000556305 SMIM17P0DL12 118 aa1.41□□□□□ -2.18
CDKN3-210ENST00000556305 RHOBP62745 196 aa1.41□□□□□ -2.18
CDKN3-210ENST00000556305 ITFG2Q969R8 447 aa1.41□□□□□ -2.18
CDKN3-210ENST00000556305 GPR146Q96CH1 333 aa1.41□□□□□ -2.18
CDKN3-210ENST00000556305 RNF122Q9H9V4 155 aa1.41□□□□□ -2.18
CDKN3-210ENST00000556305 IDI2-AS1Q9NZ38 188 aa1.41□□□□□ -2.18
CDKN3-210ENST00000556305 EPDR1Q9UM22 224 aa1.41□□□□□ -2.18
CDKN3-210ENST00000556305 SLC35A3Q9Y2D2 325 aa1.41□□□□□ -2.18
CDKN3-210ENST00000556305 SDK1Q7Z5N4 2213 aa1.41□□□□□ -2.18
CDKN3-210ENST00000556305 FAT4Q6V0I7 4981 aa1.41□□□□□ -2.18
CDKN3-210ENST00000556305 ROBO3Q96MS0 1386 aa1.41□□□□□ -2.18
CDKN3-210ENST00000556305 NEO1Q92859 1461 aa1.41□□□□□ -2.18
CDKN3-210ENST00000556305 KIDINS220Q9ULH0 1771 aa1.41□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms