RNA–Protein interactions for RNA: ENST00000556256.1

SCFD1-218, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-218ENST00000556256 CST8O60676 142 aa0.45□□□□□ -2.34
SCFD1-218ENST00000556256 KLF7O75840 302 aaPredicted RBP0.45□□□□□ -2.34
SCFD1-218ENST00000556256 NDUFC2O95298 119 aa0.45□□□□□ -2.34
SCFD1-218ENST00000556256 DNAL4O96015 105 aa0.45□□□□□ -2.34
SCFD1-218ENST00000556256 PRB4P10163 310 aaPredicted RBP0.45□□□□□ -2.34
SCFD1-218ENST00000556256 NFYBP25208 207 aa0.45□□□□□ -2.34
SCFD1-218ENST00000556256 INSL3P51460 131 aa0.45□□□□□ -2.34
SCFD1-218ENST00000556256 GNG5P63218 68 aa0.45□□□□□ -2.34
SCFD1-218ENST00000556256 HACD4Q5VWC8 232 aa0.45□□□□□ -2.34
SCFD1-218ENST00000556256 SBSPONQ8IVN8 264 aa0.45□□□□□ -2.34
SCFD1-218ENST00000556256 OR5D14Q8NGL3 314 aa0.45□□□□□ -2.34
SCFD1-218ENST00000556256 SH3BGRL3Q9H299 93 aa0.45□□□□□ -2.34
SCFD1-218ENST00000556256 POPDC3Q9HBV1 291 aa0.45□□□□□ -2.34
SCFD1-218ENST00000556256 TMEM14CQ9P0S9 112 aa0.45□□□□□ -2.34
SCFD1-218ENST00000556256 ASB4Q9Y574 426 aa0.45□□□□□ -2.34
SCFD1-218ENST00000556256 E9PCH4 1651 aa0.45□□□□□ -2.34
SCFD1-218ENST00000556256 PEAK1Q9H792 1746 aa0.44□□□□□ -2.34
SCFD1-218ENST00000556256 CECR2Q9BXF3 1484 aa0.44□□□□□ -2.34
SCFD1-218ENST00000556256 CEP164Q9UPV0 1460 aa0.44□□□□□ -2.34
SCFD1-218ENST00000556256 C17orf112F2Z3M2 114 aa0.44□□□□□ -2.34
SCFD1-218ENST00000556256 AIPO00170 330 aa0.44□□□□□ -2.34
SCFD1-218ENST00000556256 BANF1O75531 89 aa0.44□□□□□ -2.34
SCFD1-218ENST00000556256 ERC2-IT1O76042 136 aa0.44□□□□□ -2.34
SCFD1-218ENST00000556256 CD2P06729 351 aa0.44□□□□□ -2.34
SCFD1-218ENST00000556256 OR10J4P0C629 311 aa0.44□□□□□ -2.34
SCFD1-218ENST00000556256 CDK6Q00534 326 aa0.44□□□□□ -2.34
SCFD1-218ENST00000556256 SCGB2B2Q4G0G5 96 aa0.44□□□□□ -2.34
SCFD1-218ENST00000556256 PLPP5Q8NEB5 264 aa0.44□□□□□ -2.34
SCFD1-218ENST00000556256 OR5D16Q8NGK9 328 aa0.44□□□□□ -2.34
SCFD1-218ENST00000556256 POP5Q969H6 163 aaKnown RBP0.44□□□□□ -2.34
SCFD1-218ENST00000556256 RAB37Q96AX2 223 aa0.44□□□□□ -2.34
SCFD1-218ENST00000556256 GPX7Q96SL4 187 aaPredicted RBP0.44□□□□□ -2.34
SCFD1-218ENST00000556256 FBN2P35556 2912 aa0.44□□□□□ -2.34
SCFD1-218ENST00000556256 EIF3AQ14152 1382 aaKnown RBP0.44□□□□□ -2.34
SCFD1-218ENST00000556256 SCN8AQ9UQD0 1980 aa0.43□□□□□ -2.34
SCFD1-218ENST00000556256 MYH7BA7E2Y1 1941 aa0.43□□□□□ -2.34
SCFD1-218ENST00000556256 G3V2T6 193 aa0.43□□□□□ -2.34
SCFD1-218ENST00000556256 H7C1C5 153 aa0.43□□□□□ -2.34
SCFD1-218ENST00000556256 ATG12O94817 140 aa0.43□□□□□ -2.34
SCFD1-218ENST00000556256 CXCL8P10145 99 aa0.43□□□□□ -2.34
SCFD1-218ENST00000556256 PHBP35232 272 aa0.43□□□□□ -2.34
SCFD1-218ENST00000556256 RAB5CP51148 216 aa0.43□□□□□ -2.34
SCFD1-218ENST00000556256 LCN6P62502 163 aa0.43□□□□□ -2.34
SCFD1-218ENST00000556256 AKR1C8PQ5T2L2 129 aa0.43□□□□□ -2.34
SCFD1-218ENST00000556256 GKN2Q86XP6 184 aa0.43□□□□□ -2.34
SCFD1-218ENST00000556256 PPTC7Q8NI37 304 aa0.43□□□□□ -2.34
SCFD1-218ENST00000556256 ZC2HC1AQ96GY0 325 aa0.43□□□□□ -2.34
SCFD1-218ENST00000556256 CEP19Q96LK0 163 aa0.43□□□□□ -2.34
SCFD1-218ENST00000556256 PAIP2Q9BPZ3 127 aaKnown RBP0.43□□□□□ -2.34
SCFD1-218ENST00000556256 OR2J1Q9GZK6 312 aa0.43□□□□□ -2.34
SCFD1-218ENST00000556256 PBOV1Q9GZY1 135 aa0.43□□□□□ -2.34
SCFD1-218ENST00000556256 PSTPIP2Q9H939 334 aa0.43□□□□□ -2.34
SCFD1-218ENST00000556256 LYRM2Q9NU23 88 aaPredicted RBP0.43□□□□□ -2.34
SCFD1-218ENST00000556256 TRAV27A0A087WT01 109 aa0.42□□□□□ -2.34
SCFD1-218ENST00000556256 A0A1W2PPM0 123 aa0.42□□□□□ -2.34
SCFD1-218ENST00000556256 M0R233 179 aa0.42□□□□□ -2.34
SCFD1-218ENST00000556256 IFNA1P01562 189 aa0.42□□□□□ -2.34
SCFD1-218ENST00000556256 TRGC2P03986 189 aa0.42□□□□□ -2.34
SCFD1-218ENST00000556256 CXCL1P09341 107 aa0.42□□□□□ -2.34
SCFD1-218ENST00000556256 COX7CP15954 63 aa0.42□□□□□ -2.34
SCFD1-218ENST00000556256 ARPP19P56211 112 aa0.42□□□□□ -2.34
SCFD1-218ENST00000556256 HAGHLQ6PII5 290 aaPredicted RBP0.42□□□□□ -2.34
SCFD1-218ENST00000556256 LYG2Q86SG7 212 aa0.42□□□□□ -2.34
SCFD1-218ENST00000556256 OR5AS1Q8N127 324 aa0.42□□□□□ -2.34
SCFD1-218ENST00000556256 MUCL1Q96DR8 90 aa0.42□□□□□ -2.34
SCFD1-218ENST00000556256 ZHX1-C8orf76Q96EF9 292 aa0.42□□□□□ -2.34
SCFD1-218ENST00000556256 HYLS1Q96M11 299 aa0.42□□□□□ -2.34
SCFD1-218ENST00000556256 GINS3Q9BRX5 216 aa0.42□□□□□ -2.34
SCFD1-218ENST00000556256 GGACTQ9BVM4 153 aa0.42□□□□□ -2.34
SCFD1-218ENST00000556256 TNFSF18Q9UNG2 199 aa0.42□□□□□ -2.34
SCFD1-218ENST00000556256 CNTRLQ7Z7A1 2325 aa0.42□□□□□ -2.34
SCFD1-218ENST00000556256 IGLV3-32A0A0A0MS00 114 aa0.41□□□□□ -2.34
SCFD1-218ENST00000556256 TRAV5A0A0B4J249 113 aa0.41□□□□□ -2.34
SCFD1-218ENST00000556256 RIIAD1A6NNX1 92 aa0.41□□□□□ -2.34
SCFD1-218ENST00000556256 F8W1H4 67 aa0.41□□□□□ -2.34
SCFD1-218ENST00000556256 MFSD11O43934 449 aa0.41□□□□□ -2.34
SCFD1-218ENST00000556256 RPL19P84098 196 aaKnown RBP0.41□□□□□ -2.34
SCFD1-218ENST00000556256 TMEM14EPQ6UXP3 125 aa0.41□□□□□ -2.34
SCFD1-218ENST00000556256 PHF5AQ7RTV0 110 aaKnown RBP0.41□□□□□ -2.34
SCFD1-218ENST00000556256 ARPINQ7Z6K5 226 aa0.41□□□□□ -2.34
SCFD1-218ENST00000556256 NUP35Q8NFH5 326 aa0.41□□□□□ -2.34
SCFD1-218ENST00000556256 CHCHD1Q96BP2 118 aaKnown RBP0.41□□□□□ -2.34
SCFD1-218ENST00000556256 CACYBPQ9HB71 228 aaKnown RBP0.41□□□□□ -2.34
SCFD1-218ENST00000556256 SS18L2Q9UHA2 77 aa0.41□□□□□ -2.34
SCFD1-218ENST00000556256 SSR3Q9UNL2 185 aa0.41□□□□□ -2.34
SCFD1-218ENST00000556256 TRPM1Q7Z4N2 1603 aa0.41□□□□□ -2.34
SCFD1-218ENST00000556256 PLXNA4Q9HCM2 1894 aa0.41□□□□□ -2.34
SCFD1-218ENST00000556256 MDN1Q9NU22 5596 aa0.41□□□□□ -2.34
SCFD1-218ENST00000556256 UHRF1BP1Q6BDS2 1440 aa0.4□□□□□ -2.34
SCFD1-218ENST00000556256 NISCHQ9Y2I1 1504 aa0.4□□□□□ -2.35
SCFD1-218ENST00000556256 H3BRM9 83 aa0.4□□□□□ -2.35
SCFD1-218ENST00000556256 IFNA14P01570 189 aa0.4□□□□□ -2.35
SCFD1-218ENST00000556256 CSN2P05814 226 aa0.4□□□□□ -2.35
SCFD1-218ENST00000556256 OGNP20774 298 aaKnown RBP0.4□□□□□ -2.35
SCFD1-218ENST00000556256 TMBIM6P55061 237 aa0.4□□□□□ -2.35
SCFD1-218ENST00000556256 C1orf140Q5VVS0 124 aa0.4□□□□□ -2.35
SCFD1-218ENST00000556256 LINC00575Q6W349 94 aa0.4□□□□□ -2.35
SCFD1-218ENST00000556256 TMED4Q7Z7H5 227 aa0.4□□□□□ -2.35
SCFD1-218ENST00000556256 TEN1Q86WV5 123 aa0.4□□□□□ -2.35
SCFD1-218ENST00000556256 OR10AG1Q8NH19 301 aa0.4□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms