RNA–Protein interactions for RNA: ENST00000556096.6

VPS33B-205, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 1,731 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-205ENST00000556096 PGPEP1LA6NFU8 196 aa11.43□□□□□ -0.58
VPS33B-205ENST00000556096 PEX7O00628 323 aa11.43□□□□□ -0.58
VPS33B-205ENST00000556096 PFN1P07737 140 aaKnown RBP11.43□□□□□ -0.58
VPS33B-205ENST00000556096 GPR183P32249 361 aa11.43□□□□□ -0.58
VPS33B-205ENST00000556096 GNG4P50150 75 aa11.43□□□□□ -0.58
VPS33B-205ENST00000556096 Q6YL49 198 aa11.43□□□□□ -0.58
VPS33B-205ENST00000556096 ZNF414Q96IQ9 312 aa11.43□□□□□ -0.58
VPS33B-205ENST00000556096 PRDM13Q9H4Q3 707 aa11.43□□□□□ -0.58
VPS33B-205ENST00000556096 ZNF586Q9NXT0 402 aa11.43□□□□□ -0.58
VPS33B-205ENST00000556096 MLXQ9UH92 298 aa11.43□□□□□ -0.58
VPS33B-205ENST00000556096 LINC00527Q9UJ94 153 aa11.43□□□□□ -0.58
VPS33B-205ENST00000556096 EPDR1Q9UM22 224 aa11.43□□□□□ -0.58
VPS33B-205ENST00000556096 URGCP-MRPS24S4R325 110 aa11.43□□□□□ -0.58
VPS33B-205ENST00000556096 MRPS12O15235 138 aaKnown RBP11.42□□□□□ -0.58
VPS33B-205ENST00000556096 CD5LO43866 347 aa11.42□□□□□ -0.58
VPS33B-205ENST00000556096 IGLC2P0DOY2 106 aa11.42□□□□□ -0.58
VPS33B-205ENST00000556096 CENPWQ5EE01 88 aa11.42□□□□□ -0.58
VPS33B-205ENST00000556096 OR4F17Q8NGA8 305 aa11.42□□□□□ -0.58
VPS33B-205ENST00000556096 SFRP2Q96HF1 295 aa11.42□□□□□ -0.58
VPS33B-205ENST00000556096 OR5B12Q96R08 314 aa11.42□□□□□ -0.58
VPS33B-205ENST00000556096 Q9H3A6 140 aa11.42□□□□□ -0.58
VPS33B-205ENST00000556096 CDC42EP3Q9UKI2 254 aa11.42□□□□□ -0.58
VPS33B-205ENST00000556096 TRBV24-1A0A075B6N3 115 aa11.41□□□□□ -0.58
VPS33B-205ENST00000556096 BMPR1BO00238 502 aa11.41□□□□□ -0.58
VPS33B-205ENST00000556096 TGOLN2O43493 480 aa11.41□□□□□ -0.58
VPS33B-205ENST00000556096 TRGV3P03979 118 aa11.41□□□□□ -0.58
VPS33B-205ENST00000556096 CXCL1P09341 107 aa11.41□□□□□ -0.58
VPS33B-205ENST00000556096 FOSL1P15407 271 aa11.41□□□□□ -0.58
VPS33B-205ENST00000556096 CNN1P51911 297 aaKnown RBP11.41□□□□□ -0.58
VPS33B-205ENST00000556096 FLI1Q01543 452 aaPredicted RBP11.41□□□□□ -0.58
VPS33B-205ENST00000556096 CLEC19AQ6UXS0 136 aa11.41□□□□□ -0.58
VPS33B-205ENST00000556096 LYPD1Q8N2G4 141 aa11.41□□□□□ -0.58
VPS33B-205ENST00000556096 C5orf17Q8NAS9 161 aa11.41□□□□□ -0.58
VPS33B-205ENST00000556096 USMG5Q96IX5 58 aa11.41□□□□□ -0.58
VPS33B-205ENST00000556096 IGF2BP2-AS1Q96M15 143 aa11.41□□□□□ -0.58
VPS33B-205ENST00000556096 OTORQ9NRC9 128 aa11.41□□□□□ -0.58
VPS33B-205ENST00000556096 AURKAIP1Q9NWT8 199 aaPredicted RBP11.41□□□□□ -0.58
VPS33B-205ENST00000556096 RABAC1Q9UI14 185 aa11.41□□□□□ -0.58
VPS33B-205ENST00000556096 MXRA5Q9NR99 2828 aa11.41□□□□□ -0.58
VPS33B-205ENST00000556096 TRBV19A0A075B6N1 114 aa11.4□□□□□ -0.58
VPS33B-205ENST00000556096 C1orf196B1AJZ1 125 aa11.4□□□□□ -0.58
VPS33B-205ENST00000556096 K7EN84 100 aa11.4□□□□□ -0.58
VPS33B-205ENST00000556096 SLC25A5P05141 298 aaKnown RBP11.4□□□□□ -0.58
VPS33B-205ENST00000556096 SNRPCP09234 159 aaKnown RBP11.4□□□□□ -0.58
VPS33B-205ENST00000556096 S100PP25815 95 aa11.4□□□□□ -0.58
VPS33B-205ENST00000556096 SRP14P37108 136 aaKnown RBP11.4□□□□□ -0.58
VPS33B-205ENST00000556096 GALR1P47211 349 aa11.4□□□□□ -0.58
VPS33B-205ENST00000556096 TEX38Q6PEX7 206 aa11.4□□□□□ -0.58
VPS33B-205ENST00000556096 TOMM20LQ6UXN7 152 aa11.4□□□□□ -0.58
VPS33B-205ENST00000556096 Q6ZS46 218 aa11.4□□□□□ -0.58
VPS33B-205ENST00000556096 C1QL4Q86Z23 238 aa11.4□□□□□ -0.58
VPS33B-205ENST00000556096 IMMP2LQ96T52 175 aa11.4□□□□□ -0.58
VPS33B-205ENST00000556096 PYGO2Q9BRQ0 406 aa11.4□□□□□ -0.58
VPS33B-205ENST00000556096 SONP18583 2426 aaKnown RBP11.4□□□□□ -0.58
VPS33B-205ENST00000556096 TGIF2-C20orf24A0A0A6YYL0 155 aa11.4□□□□□ -0.58
VPS33B-205ENST00000556096 IGLV1-40P01703 118 aa11.4□□□□□ -0.58
VPS33B-205ENST00000556096 S100A9P06702 114 aaKnown RBP11.4□□□□□ -0.58
VPS33B-205ENST00000556096 RELQ04864 619 aaPredicted RBP11.4□□□□□ -0.58
VPS33B-205ENST00000556096 TEX29Q8N6K0 151 aa11.4□□□□□ -0.58
VPS33B-205ENST00000556096 NOL4LQ96MY1 436 aaPredicted RBP11.4□□□□□ -0.58
VPS33B-205ENST00000556096 ZFAND3Q9H8U3 227 aa11.4□□□□□ -0.58
VPS33B-205ENST00000556096 VPREB3Q9UKI3 123 aa11.4□□□□□ -0.58
VPS33B-205ENST00000556096 KLF12Q9Y4X4 402 aa11.4□□□□□ -0.58
VPS33B-205ENST00000556096 INAFM1C9JVW0 142 aa11.39□□□□□ -0.59
VPS33B-205ENST00000556096 GCGP01275 180 aa11.39□□□□□ -0.59
VPS33B-205ENST00000556096 IGLV2-8P01709 118 aa11.39□□□□□ -0.59
VPS33B-205ENST00000556096 RPL7P18124 248 aaKnown RBP11.39□□□□□ -0.59
VPS33B-205ENST00000556096 RAB9AP51151 201 aa11.39□□□□□ -0.59
VPS33B-205ENST00000556096 RAB5BP61020 215 aa11.39□□□□□ -0.59
VPS33B-205ENST00000556096 CFHR3Q02985 330 aa11.39□□□□□ -0.59
VPS33B-205ENST00000556096 PDE6HQ13956 83 aa11.39□□□□□ -0.59
VPS33B-205ENST00000556096 TMEM183BQ1AE95 376 aa11.39□□□□□ -0.59
VPS33B-205ENST00000556096 OR10G8Q8NGN5 311 aa11.39□□□□□ -0.59
VPS33B-205ENST00000556096 FAM210BQ96KR6 192 aa11.39□□□□□ -0.59
VPS33B-205ENST00000556096 ATG101Q9BSB4 218 aa11.39□□□□□ -0.59
VPS33B-205ENST00000556096 RPS10P46783 165 aaKnown RBP11.38□□□□□ -0.59
VPS33B-205ENST00000556096 TPPP2P59282 170 aa11.38□□□□□ -0.59
VPS33B-205ENST00000556096 LINC00479Q96M42 142 aa11.38□□□□□ -0.59
VPS33B-205ENST00000556096 H3BTX0 84 aa11.38□□□□□ -0.59
VPS33B-205ENST00000556096 GGCTO75223 188 aaKnown RBP11.38□□□□□ -0.59
VPS33B-205ENST00000556096 TCRAP04437 139 aa11.38□□□□□ -0.59
VPS33B-205ENST00000556096 HNF1AP20823 631 aa11.38□□□□□ -0.59
VPS33B-205ENST00000556096 GNG5P63218 68 aa11.38□□□□□ -0.59
VPS33B-205ENST00000556096 KCNIP4Q6PIL6 250 aa11.38□□□□□ -0.59
VPS33B-205ENST00000556096 SMIM12Q96EX1 92 aa11.38□□□□□ -0.59
VPS33B-205ENST00000556096 GNB4Q9HAV0 340 aa11.38□□□□□ -0.59
VPS33B-205ENST00000556096 A0A0G2JLM5 398 aa11.37□□□□□ -0.59
VPS33B-205ENST00000556096 FOXL1Q12952 345 aa11.37□□□□□ -0.59
VPS33B-205ENST00000556096 SIGLEC15Q6ZMC9 328 aa11.37□□□□□ -0.59
VPS33B-205ENST00000556096 BAGE2Q86Y30 109 aa11.37□□□□□ -0.59
VPS33B-205ENST00000556096 FMC1Q96HJ9 113 aa11.37□□□□□ -0.59
VPS33B-205ENST00000556096 OSTCQ9NRP0 149 aa11.37□□□□□ -0.59
VPS33B-205ENST00000556096 MTORP42345 2549 aa11.36□□□□□ -0.59
VPS33B-205ENST00000556096 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.36□□□□□ -0.59
VPS33B-205ENST00000556096 IGHV3-35A0A0C4DH35 117 aa11.36□□□□□ -0.59
VPS33B-205ENST00000556096 TMEM89A2RUT3 159 aa11.36□□□□□ -0.59
VPS33B-205ENST00000556096 ISLRO14498 428 aa11.36□□□□□ -0.59
VPS33B-205ENST00000556096 PF4V1P10720 104 aa11.36□□□□□ -0.59
VPS33B-205ENST00000556096 RIPPLY3P57055 190 aa11.36□□□□□ -0.59
VPS33B-205ENST00000556096 UBE2G1P62253 170 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms