RNA–Protein interactions for RNA: ENST00000555535.1

SRP54-207, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-207ENST00000555535 A0A087WUJ7 227 aa-0.01□□□□□ -2.41
SRP54-207ENST00000555535 TRGV10A0A0A0MS01 117 aa-0.01□□□□□ -2.41
SRP54-207ENST00000555535 ZNF727A8MUV8 499 aa-0.01□□□□□ -2.41
SRP54-207ENST00000555535 J3QRK9 145 aa-0.01□□□□□ -2.41
SRP54-207ENST00000555535 K7EIL1 84 aa-0.01□□□□□ -2.41
SRP54-207ENST00000555535 TMEM256-PLSCR3K7ERE1 68 aa-0.01□□□□□ -2.41
SRP54-207ENST00000555535 KPNA3O00505 521 aaPredicted RBP-0.01□□□□□ -2.41
SRP54-207ENST00000555535 HMGB3O15347 200 aaKnown RBP-0.01□□□□□ -2.41
SRP54-207ENST00000555535 SERPINA6P08185 405 aa-0.01□□□□□ -2.41
SRP54-207ENST00000555535 CXCL8P10145 99 aa-0.01□□□□□ -2.41
SRP54-207ENST00000555535 COX7CP15954 63 aa-0.01□□□□□ -2.41
SRP54-207ENST00000555535 ERP29P30040 261 aaKnown RBP-0.01□□□□□ -2.41
SRP54-207ENST00000555535 OMPP47874 163 aa-0.01□□□□□ -2.41
SRP54-207ENST00000555535 ROMO1P60602 79 aa-0.01□□□□□ -2.41
SRP54-207ENST00000555535 AESQ08117 197 aa-0.01□□□□□ -2.41
SRP54-207ENST00000555535 PXT1Q8NFP0 134 aa-0.01□□□□□ -2.41
SRP54-207ENST00000555535 OR10AC1Q8NH08 325 aa-0.01□□□□□ -2.41
SRP54-207ENST00000555535 OR4K15Q8NH41 348 aa-0.01□□□□□ -2.41
SRP54-207ENST00000555535 POP5Q969H6 163 aaKnown RBP-0.01□□□□□ -2.41
SRP54-207ENST00000555535 BORCS7Q96B45 105 aa-0.01□□□□□ -2.41
SRP54-207ENST00000555535 PPP1R14BQ96C90 147 aa-0.01□□□□□ -2.41
SRP54-207ENST00000555535 MUCL1Q96DR8 90 aa-0.01□□□□□ -2.41
SRP54-207ENST00000555535 C2orf50Q96LR7 162 aa-0.01□□□□□ -2.41
SRP54-207ENST00000555535 LIMD2Q9BT23 127 aa-0.01□□□□□ -2.41
SRP54-207ENST00000555535 C20orf27Q9GZN8 174 aa-0.01□□□□□ -2.41
SRP54-207ENST00000555535 NOSIPQ9Y314 301 aaKnown RBP-0.01□□□□□ -2.41
SRP54-207ENST00000555535 CCDC144AA2RUR9 1427 aa-0.02□□□□□ -2.41
SRP54-207ENST00000555535 BCL9O00512 1426 aa-0.02□□□□□ -2.41
SRP54-207ENST00000555535 RTL1A6NKG5 1358 aa-0.02□□□□□ -2.41
SRP54-207ENST00000555535 C9orf170A2RU37 121 aa-0.02□□□□□ -2.41
SRP54-207ENST00000555535 SMIM23A6NLE4 172 aa-0.02□□□□□ -2.41
SRP54-207ENST00000555535 A8MWV9 139 aa-0.02□□□□□ -2.41
SRP54-207ENST00000555535 TAX1BP3O14907 124 aa-0.02□□□□□ -2.41
SRP54-207ENST00000555535 BANF1O75531 89 aa-0.02□□□□□ -2.41
SRP54-207ENST00000555535 ATP5G3P48201 142 aa-0.02□□□□□ -2.41
SRP54-207ENST00000555535 FXYD4P59646 89 aa-0.02□□□□□ -2.41
SRP54-207ENST00000555535 AP3S2P59780 193 aa-0.02□□□□□ -2.41
SRP54-207ENST00000555535 MAGOHP61326 146 aaKnown RBP-0.02□□□□□ -2.41
SRP54-207ENST00000555535 UBE2BP63146 152 aa-0.02□□□□□ -2.41
SRP54-207ENST00000555535 H3F3AP84243 136 aa-0.02□□□□□ -2.41
SRP54-207ENST00000555535 MYL5Q02045 173 aa-0.02□□□□□ -2.41
SRP54-207ENST00000555535 IMPG1Q17R60 797 aa-0.02□□□□□ -2.41
SRP54-207ENST00000555535 TMEM14EPQ6UXP3 125 aa-0.02□□□□□ -2.41
SRP54-207ENST00000555535 ZNF431Q8TF32 576 aaPredicted RBP-0.02□□□□□ -2.41
SRP54-207ENST00000555535 ZNF714Q96N38 554 aa-0.02□□□□□ -2.41
SRP54-207ENST00000555535 SIGMAR1Q99720 223 aa-0.02□□□□□ -2.41
SRP54-207ENST00000555535 NABP2Q9BQ15 211 aa-0.02□□□□□ -2.41
SRP54-207ENST00000555535 LINC00467Q9BRT7 94 aa-0.02□□□□□ -2.41
SRP54-207ENST00000555535 NPCDR1Q9BY65 106 aa-0.02□□□□□ -2.41
SRP54-207ENST00000555535 TMEM126AQ9H061 195 aa-0.02□□□□□ -2.41
SRP54-207ENST00000555535 CTNNBIP1Q9NSA3 81 aaPredicted RBP-0.02□□□□□ -2.41
SRP54-207ENST00000555535 JPT1Q9UK76 154 aa-0.02□□□□□ -2.41
SRP54-207ENST00000555535 FAM32AQ9Y421 112 aaKnown RBP-0.02□□□□□ -2.41
SRP54-207ENST00000555535 MEGF8Q7Z7M0 2845 aa-0.02□□□□□ -2.41
SRP54-207ENST00000555535 NCOA1Q15788 1441 aa-0.03□□□□□ -2.41
SRP54-207ENST00000555535 ANKRD31Q8N7Z5 1873 aa-0.03□□□□□ -2.41
SRP54-207ENST00000555535 A0A096LPI6 279 aa-0.03□□□□□ -2.41
SRP54-207ENST00000555535 K7ERJ3 54 aa-0.03□□□□□ -2.41
SRP54-207ENST00000555535 RPP14O95059 124 aaKnown RBP-0.03□□□□□ -2.41
SRP54-207ENST00000555535 LY6G6CO95867 125 aa-0.03□□□□□ -2.41
SRP54-207ENST00000555535 FOXA3P55318 350 aaPredicted RBP-0.03□□□□□ -2.41
SRP54-207ENST00000555535 DSCR4P56555 118 aaPredicted RBP-0.03□□□□□ -2.41
SRP54-207ENST00000555535 RANP62826 216 aaKnown RBP-0.03□□□□□ -2.41
SRP54-207ENST00000555535 EIF3IQ13347 325 aaKnown RBP-0.03□□□□□ -2.41
SRP54-207ENST00000555535 TAF1AQ15573 450 aaPredicted RBP-0.03□□□□□ -2.41
SRP54-207ENST00000555535 IAH1Q2TAA2 248 aaPredicted RBP-0.03□□□□□ -2.41
SRP54-207ENST00000555535 OCIAD2Q56VL3 154 aa-0.03□□□□□ -2.41
SRP54-207ENST00000555535 EIF5AL1Q6IS14 154 aaKnown RBP-0.03□□□□□ -2.41
SRP54-207ENST00000555535 C22orf39Q6P5X5 142 aa-0.03□□□□□ -2.41
SRP54-207ENST00000555535 Q6ZQY7 126 aa-0.03□□□□□ -2.41
SRP54-207ENST00000555535 S100A7AQ86SG5 101 aa-0.03□□□□□ -2.41
SRP54-207ENST00000555535 IFT20Q8IY31 132 aa-0.03□□□□□ -2.41
SRP54-207ENST00000555535 C12orf45Q8N5I9 185 aaPredicted RBP-0.03□□□□□ -2.41
SRP54-207ENST00000555535 PLAC4Q8WY50 150 aa-0.03□□□□□ -2.41
SRP54-207ENST00000555535 CHCHD1Q96BP2 118 aaKnown RBP-0.03□□□□□ -2.41
SRP54-207ENST00000555535 YPEL2Q96QA6 119 aa-0.03□□□□□ -2.41
SRP54-207ENST00000555535 KIFC1Q9BW19 673 aa-0.03□□□□□ -2.41
SRP54-207ENST00000555535 TMEM133Q9H2Q1 129 aa-0.03□□□□□ -2.41
SRP54-207ENST00000555535 ENY2Q9NPA8 101 aa-0.03□□□□□ -2.41
SRP54-207ENST00000555535 ARL5AQ9Y689 179 aa-0.03□□□□□ -2.41
SRP54-207ENST00000555535 MYH1P12882 1939 aa-0.03□□□□□ -2.41
SRP54-207ENST00000555535 CEP164Q9UPV0 1460 aa-0.03□□□□□ -2.41
SRP54-207ENST00000555535 ZFYVE9O95405 1425 aa-0.04□□□□□ -2.42
SRP54-207ENST00000555535 ERBINQ96RT1 1412 aa-0.04□□□□□ -2.42
SRP54-207ENST00000555535 MAP3K5Q99683 1374 aa-0.04□□□□□ -2.42
SRP54-207ENST00000555535 TPRP12270 2363 aaKnown RBP-0.04□□□□□ -2.42
SRP54-207ENST00000555535 TRAV4A0A0B4J268 109 aa-0.04□□□□□ -2.42
SRP54-207ENST00000555535 E7EUB6 86 aa-0.04□□□□□ -2.42
SRP54-207ENST00000555535 C17orf112F2Z3M2 114 aa-0.04□□□□□ -2.42
SRP54-207ENST00000555535 GPR31O00270 319 aa-0.04□□□□□ -2.42
SRP54-207ENST00000555535 TCRBP04435 133 aa-0.04□□□□□ -2.42
SRP54-207ENST00000555535 CXCL1P09341 107 aa-0.04□□□□□ -2.42
SRP54-207ENST00000555535 DYNLT3P51808 116 aa-0.04□□□□□ -2.42
SRP54-207ENST00000555535 CEBPGP53567 150 aa-0.04□□□□□ -2.42
SRP54-207ENST00000555535 FXYD6P3P58550 94 aa-0.04□□□□□ -2.42
SRP54-207ENST00000555535 RPL37AP61513 92 aaKnown RBP-0.04□□□□□ -2.42
SRP54-207ENST00000555535 LSM6P62312 80 aaKnown RBP-0.04□□□□□ -2.42
SRP54-207ENST00000555535 EDDM3AQ14507 147 aa-0.04□□□□□ -2.42
SRP54-207ENST00000555535 RRN3P1Q2M238 152 aa-0.04□□□□□ -2.42
SRP54-207ENST00000555535 CASC2Q6XLA1 102 aa-0.04□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms