RNA–Protein interactions for RNA: ENST00000554879.5

PCNX1-209, Transcript of pecanex 1, humanhuman

TSL 1 (best)

Gene PCNX1, Length 4,431 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-209ENST00000554879 LYZP61626 148 aa13.4□□□□□ -0.27
PCNX1-209ENST00000554879 IGFBP2P18065 325 aa13.39□□□□□ -0.27
PCNX1-209ENST00000554879 FA2HQ7L5A8 372 aa13.39□□□□□ -0.27
PCNX1-209ENST00000554879 LHFPL4Q7Z7J7 247 aa13.39□□□□□ -0.27
PCNX1-209ENST00000554879 SSBP4Q9BWG4 385 aaPredicted RBP13.39□□□□□ -0.27
PCNX1-209ENST00000554879 A0A1W2PS18 150 aa13.39□□□□□ -0.27
PCNX1-209ENST00000554879 PSG5Q15238 335 aa13.39□□□□□ -0.27
PCNX1-209ENST00000554879 LY6EQ16553 131 aa13.39□□□□□ -0.27
PCNX1-209ENST00000554879 HAPLN4Q86UW8 402 aa13.39□□□□□ -0.27
PCNX1-209ENST00000554879 IL36BQ9NZH7 164 aa13.39□□□□□ -0.27
PCNX1-209ENST00000554879 NBEAQ8NFP9 2946 aa13.39□□□□□ -0.27
PCNX1-209ENST00000554879 IGLC7A0M8Q6 106 aa13.39□□□□□ -0.27
PCNX1-209ENST00000554879 PAX1P15863 534 aa13.39□□□□□ -0.27
PCNX1-209ENST00000554879 BLNKQ8WV28 456 aa13.39□□□□□ -0.27
PCNX1-209ENST00000554879 RNASE7Q9H1E1 156 aaKnown RBP13.39□□□□□ -0.27
PCNX1-209ENST00000554879 LAMA5O15230 3695 aa13.39□□□□□ -0.27
PCNX1-209ENST00000554879 IGHV1-3A0A0C4DH29 117 aa13.38□□□□□ -0.27
PCNX1-209ENST00000554879 TMEM14EPQ6UXP3 125 aa13.38□□□□□ -0.27
PCNX1-209ENST00000554879 VMO1Q7Z5L0 202 aa13.38□□□□□ -0.27
PCNX1-209ENST00000554879 SONP18583 2426 aaKnown RBP13.38□□□□□ -0.27
PCNX1-209ENST00000554879 SRRM4A7MD48 611 aaKnown RBP13.38□□□□□ -0.27
PCNX1-209ENST00000554879 PROP1O75360 226 aa13.38□□□□□ -0.27
PCNX1-209ENST00000554879 MT-ND6P03923 174 aa13.38□□□□□ -0.27
PCNX1-209ENST00000554879 TYMSP04818 313 aa13.38□□□□□ -0.27
PCNX1-209ENST00000554879 OR4A5Q8NH83 315 aa13.38□□□□□ -0.27
PCNX1-209ENST00000554879 ANAPC13Q9BS18 74 aa13.38□□□□□ -0.27
PCNX1-209ENST00000554879 C1RLQ9NZP8 487 aa13.38□□□□□ -0.27
PCNX1-209ENST00000554879 TOMM40O96008 361 aa13.38□□□□□ -0.27
PCNX1-209ENST00000554879 MLANAQ16655 118 aa13.38□□□□□ -0.27
PCNX1-209ENST00000554879 ANXA2RQ3ZCQ2 193 aa13.38□□□□□ -0.27
PCNX1-209ENST00000554879 FAM71F2Q6NXP2 309 aa13.38□□□□□ -0.27
PCNX1-209ENST00000554879 A0A0G2JLM5 398 aa13.38□□□□□ -0.27
PCNX1-209ENST00000554879 BUB1B-PAK6H3BSN5 160 aa13.38□□□□□ -0.27
PCNX1-209ENST00000554879 RCHY1Q96PM5 261 aa13.38□□□□□ -0.27
PCNX1-209ENST00000554879 KAAG1Q9UBP8 84 aa13.38□□□□□ -0.27
PCNX1-209ENST00000554879 MOSP00540 346 aa13.37□□□□□ -0.27
PCNX1-209ENST00000554879 C15orf62A8K5M9 175 aa13.37□□□□□ -0.27
PCNX1-209ENST00000554879 CNTFRP26992 372 aa13.37□□□□□ -0.27
PCNX1-209ENST00000554879 PPP1R27Q86WC6 154 aa13.37□□□□□ -0.27
PCNX1-209ENST00000554879 NRGNQ92686 78 aa13.37□□□□□ -0.27
PCNX1-209ENST00000554879 IGHV3-35A0A0C4DH35 117 aa13.37□□□□□ -0.27
PCNX1-209ENST00000554879 HLA-DQA1P01909 254 aa13.37□□□□□ -0.27
PCNX1-209ENST00000554879 NBEAP1P0C6P0 100 aa13.37□□□□□ -0.27
PCNX1-209ENST00000554879 FAM106CPP0CH98 169 aa13.37□□□□□ -0.27
PCNX1-209ENST00000554879 COL8A1P27658 744 aa13.37□□□□□ -0.27
PCNX1-209ENST00000554879 ZNF726P1Q15940 193 aa13.37□□□□□ -0.27
PCNX1-209ENST00000554879 PSMG3Q9BT73 122 aaPredicted RBP13.37□□□□□ -0.27
PCNX1-209ENST00000554879 ARL14EPLP0DKL9 152 aa13.36□□□□□ -0.27
PCNX1-209ENST00000554879 MBD3L1Q8WWY6 194 aa13.36□□□□□ -0.27
PCNX1-209ENST00000554879 NOTCH3Q9UM47 2321 aa13.36□□□□□ -0.27
PCNX1-209ENST00000554879 A0A1B0GWB2 263 aa13.36□□□□□ -0.27
PCNX1-209ENST00000554879 PRCDQ00LT1 54 aa13.36□□□□□ -0.27
PCNX1-209ENST00000554879 PRSS3P2Q8NHM4 247 aa13.36□□□□□ -0.27
PCNX1-209ENST00000554879 C7orf69Q9H7B7 122 aa13.36□□□□□ -0.27
PCNX1-209ENST00000554879 ADGRG4Q8IZF6 3080 aa13.36□□□□□ -0.27
PCNX1-209ENST00000554879 MPDU1O75352 247 aa13.36□□□□□ -0.27
PCNX1-209ENST00000554879 ST20Q9HBF5 79 aa13.36□□□□□ -0.27
PCNX1-209ENST00000554879 UBE2L3P68036 154 aaKnown RBP13.36□□□□□ -0.27
PCNX1-209ENST00000554879 TMEM97Q5BJF2 176 aa13.36□□□□□ -0.27
PCNX1-209ENST00000554879 SFTA2Q6UW10 78 aa13.36□□□□□ -0.27
PCNX1-209ENST00000554879 BOD1L2Q8IYS8 172 aa13.36□□□□□ -0.27
PCNX1-209ENST00000554879 MAPK1IP1LQ8NDC0 245 aa13.36□□□□□ -0.27
PCNX1-209ENST00000554879 SGK494Q96LW2 274 aa13.36□□□□□ -0.27
PCNX1-209ENST00000554879 SH2D7A6NKC9 451 aaPredicted RBP13.35□□□□□ -0.27
PCNX1-209ENST00000554879 HLA-DRB1P01911 266 aa13.35□□□□□ -0.27
PCNX1-209ENST00000554879 ZNF114Q8NC26 417 aa13.35□□□□□ -0.27
PCNX1-209ENST00000554879 FASNP49327 2511 aaKnown RBP13.35□□□□□ -0.27
PCNX1-209ENST00000554879 CD5LO43866 347 aa13.35□□□□□ -0.27
PCNX1-209ENST00000554879 CRYBB3P26998 211 aa13.35□□□□□ -0.27
PCNX1-209ENST00000554879 TPSG1Q9NRR2 321 aa13.35□□□□□ -0.27
PCNX1-209ENST00000554879 FOXA2Q9Y261 457 aaPredicted RBP13.35□□□□□ -0.27
PCNX1-209ENST00000554879 TAX1BP3O14907 124 aa13.34□□□□□ -0.27
PCNX1-209ENST00000554879 FOXL1Q12952 345 aa13.34□□□□□ -0.27
PCNX1-209ENST00000554879 IBA57Q5T440 356 aaKnown RBP13.34□□□□□ -0.27
PCNX1-209ENST00000554879 BRD3OSQ6XYD6 125 aa13.34□□□□□ -0.27
PCNX1-209ENST00000554879 SRSF12Q8WXF0 261 aaKnown RBP13.34□□□□□ -0.27
PCNX1-209ENST00000554879 TRAV1-1A0A0B4J248 108 aa13.34□□□□□ -0.27
PCNX1-209ENST00000554879 H3BVH4 76 aa13.34□□□□□ -0.27
PCNX1-209ENST00000554879 BVES-AS1Q5T3Y7 98 aa13.34□□□□□ -0.27
PCNX1-209ENST00000554879 C1orf229Q6ZS94 237 aaPredicted RBP13.34□□□□□ -0.27
PCNX1-209ENST00000554879 TSKUQ8WUA8 353 aa13.34□□□□□ -0.27
PCNX1-209ENST00000554879 PYGO2Q9BRQ0 406 aa13.34□□□□□ -0.27
PCNX1-209ENST00000554879 GAGE12HA6NDE8 117 aa13.33□□□□□ -0.27
PCNX1-209ENST00000554879 BRWD1-AS2P59051 145 aa13.33□□□□□ -0.27
PCNX1-209ENST00000554879 SP5Q6BEB4 398 aaPredicted RBP13.33□□□□□ -0.27
PCNX1-209ENST00000554879 SMIM20Q8N5G0 67 aa13.33□□□□□ -0.27
PCNX1-209ENST00000554879 TRAV40A0A0B4J280 105 aa13.33□□□□□ -0.28
PCNX1-209ENST00000554879 TEX48A0A1B0GUV7 120 aa13.33□□□□□ -0.28
PCNX1-209ENST00000554879 FAM181BA6NEQ2 426 aa13.33□□□□□ -0.28
PCNX1-209ENST00000554879 FRMD6-AS1P0C7T7 363 aa13.33□□□□□ -0.28
PCNX1-209ENST00000554879 TREML4Q6UXN2 200 aa13.33□□□□□ -0.28
PCNX1-209ENST00000554879 ZNF257Q9Y2Q1 563 aa13.33□□□□□ -0.28
PCNX1-209ENST00000554879 MAP1AP78559 2803 aaPredicted RBP13.33□□□□□ -0.28
PCNX1-209ENST00000554879 AMY1AP04745 511 aa13.33□□□□□ -0.28
PCNX1-209ENST00000554879 ZNF833PQ6ZTB9 187 aa13.33□□□□□ -0.28
PCNX1-209ENST00000554879 IGHV3-23P01764 117 aa13.33□□□□□ -0.28
PCNX1-209ENST00000554879 C10orf113Q5VZT2 155 aa13.33□□□□□ -0.28
PCNX1-209ENST00000554879 OR52E5Q8NH55 327 aa13.33□□□□□ -0.28
PCNX1-209ENST00000554879 B5MCH6 92 aa13.32□□□□□ -0.28
PCNX1-209ENST00000554879 H3BTX0 84 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms