RNA–Protein interactions for RNA: ENST00000554514.1

ARHGEF40-203, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 2,928 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-203ENST00000554514 SH2D7A6NKC9 451 aaPredicted RBP12.44□□□□□ -0.42
ARHGEF40-203ENST00000554514 I3L2K1 104 aa12.44□□□□□ -0.42
ARHGEF40-203ENST00000554514 FMC1Q96HJ9 113 aa12.44□□□□□ -0.42
ARHGEF40-203ENST00000554514 CHRDL1Q9BU40 450 aa12.44□□□□□ -0.42
ARHGEF40-203ENST00000554514 TOMM40O96008 361 aa12.44□□□□□ -0.42
ARHGEF40-203ENST00000554514 LIPFP07098 398 aa12.44□□□□□ -0.42
ARHGEF40-203ENST00000554514 IGKV1-17P01599 117 aa12.43□□□□□ -0.42
ARHGEF40-203ENST00000554514 COL8A1P27658 744 aa12.43□□□□□ -0.42
ARHGEF40-203ENST00000554514 WIPF2Q8TF74 440 aaPredicted RBP12.43□□□□□ -0.42
ARHGEF40-203ENST00000554514 ALKBH7Q9BT30 221 aaPredicted RBP12.43□□□□□ -0.42
ARHGEF40-203ENST00000554514 MLST8Q9BVC4 326 aa12.43□□□□□ -0.42
ARHGEF40-203ENST00000554514 KLF12Q9Y4X4 402 aa12.43□□□□□ -0.42
ARHGEF40-203ENST00000554514 AKAP6Q13023 2319 aa12.43□□□□□ -0.42
ARHGEF40-203ENST00000554514 LTAP01374 205 aa12.43□□□□□ -0.42
ARHGEF40-203ENST00000554514 HTR1DP28221 377 aa12.43□□□□□ -0.42
ARHGEF40-203ENST00000554514 CA7P43166 264 aa12.43□□□□□ -0.42
ARHGEF40-203ENST00000554514 Q56UQ5 140 aa12.43□□□□□ -0.42
ARHGEF40-203ENST00000554514 PVRIGQ6DKI7 326 aa12.43□□□□□ -0.42
ARHGEF40-203ENST00000554514 HRNRQ86YZ3 2850 aaPredicted RBP12.43□□□□□ -0.42
ARHGEF40-203ENST00000554514 IGHV3-23P01764 117 aa12.42□□□□□ -0.42
ARHGEF40-203ENST00000554514 HBBP68871 147 aa12.42□□□□□ -0.42
ARHGEF40-203ENST00000554514 OR4B1Q8NGF8 309 aa12.42□□□□□ -0.42
ARHGEF40-203ENST00000554514 TIMM8BQ9Y5J9 83 aaPredicted RBP12.42□□□□□ -0.42
ARHGEF40-203ENST00000554514 A8MWL6 223 aa12.42□□□□□ -0.42
ARHGEF40-203ENST00000554514 IL4P05112 153 aa12.42□□□□□ -0.42
ARHGEF40-203ENST00000554514 BCL6BQ8N143 479 aaPredicted RBP12.42□□□□□ -0.42
ARHGEF40-203ENST00000554514 CLEC5AQ9NY25 188 aa12.42□□□□□ -0.42
ARHGEF40-203ENST00000554514 Q86TA4 180 aa12.41□□□□□ -0.42
ARHGEF40-203ENST00000554514 TPPP3Q9BW30 176 aa12.41□□□□□ -0.42
ARHGEF40-203ENST00000554514 K7EIM0 57 aa12.41□□□□□ -0.42
ARHGEF40-203ENST00000554514 ZNF25P17030 456 aaPredicted RBP12.41□□□□□ -0.42
ARHGEF40-203ENST00000554514 FCGR2BP31994 310 aaPredicted RBP12.41□□□□□ -0.42
ARHGEF40-203ENST00000554514 SAPCD1Q5SSQ6 148 aa12.41□□□□□ -0.42
ARHGEF40-203ENST00000554514 RASL11AQ6T310 242 aa12.41□□□□□ -0.42
ARHGEF40-203ENST00000554514 OTORQ9NRC9 128 aa12.41□□□□□ -0.42
ARHGEF40-203ENST00000554514 CACNA1BQ00975 2339 aa12.41□□□□□ -0.42
ARHGEF40-203ENST00000554514 NCBP2LA6PVI3 153 aaKnown RBP12.41□□□□□ -0.42
ARHGEF40-203ENST00000554514 LY6LH3BQJ8 138 aa12.41□□□□□ -0.42
ARHGEF40-203ENST00000554514 NBR2O15453 112 aa12.41□□□□□ -0.42
ARHGEF40-203ENST00000554514 TXN2Q99757 166 aa12.41□□□□□ -0.42
ARHGEF40-203ENST00000554514 DPM3Q9P2X0 92 aa12.41□□□□□ -0.42
ARHGEF40-203ENST00000554514 PLP1P60201 277 aa12.4□□□□□ -0.42
ARHGEF40-203ENST00000554514 A0A1B0GXF2 115 aa12.4□□□□□ -0.42
ARHGEF40-203ENST00000554514 FAM181BA6NEQ2 426 aa12.4□□□□□ -0.42
ARHGEF40-203ENST00000554514 TFPI2P48307 235 aa12.4□□□□□ -0.42
ARHGEF40-203ENST00000554514 EBLN2Q6P2I7 272 aa12.4□□□□□ -0.42
ARHGEF40-203ENST00000554514 MRPL27Q9P0M9 148 aaKnown RBP12.4□□□□□ -0.42
ARHGEF40-203ENST00000554514 C19orf71A6NCJ1 209 aa12.39□□□□□ -0.43
ARHGEF40-203ENST00000554514 M0R3E3 92 aa12.39□□□□□ -0.43
ARHGEF40-203ENST00000554514 CHEK1O14757 476 aa12.39□□□□□ -0.43
ARHGEF40-203ENST00000554514 RAB1BQ9H0U4 201 aa12.39□□□□□ -0.43
ARHGEF40-203ENST00000554514 IGHV3OR16-8A0A075B7F1 116 aa12.39□□□□□ -0.43
ARHGEF40-203ENST00000554514 ZNF138P52744 262 aa12.39□□□□□ -0.43
ARHGEF40-203ENST00000554514 OR4F17Q8NGA8 305 aa12.39□□□□□ -0.43
ARHGEF40-203ENST00000554514 TIMD4Q96H15 378 aa12.39□□□□□ -0.43
ARHGEF40-203ENST00000554514 PRSS22Q9GZN4 317 aa12.39□□□□□ -0.43
ARHGEF40-203ENST00000554514 RAXQ9Y2V3 346 aa12.39□□□□□ -0.43
ARHGEF40-203ENST00000554514 GNG7O60262 68 aa12.38□□□□□ -0.43
ARHGEF40-203ENST00000554514 RPLP1P05386 114 aaKnown RBP12.38□□□□□ -0.43
ARHGEF40-203ENST00000554514 Q6ZN92 141 aa12.38□□□□□ -0.43
ARHGEF40-203ENST00000554514 ATP5L2Q7Z4Y8 100 aa12.38□□□□□ -0.43
ARHGEF40-203ENST00000554514 BPIFA4PQ86YQ2 179 aa12.38□□□□□ -0.43
ARHGEF40-203ENST00000554514 RNF125Q96EQ8 232 aa12.38□□□□□ -0.43
ARHGEF40-203ENST00000554514 CSN3P07498 182 aa12.38□□□□□ -0.43
ARHGEF40-203ENST00000554514 RBPMS2Q6ZRY4 209 aaKnown RBP12.38□□□□□ -0.43
ARHGEF40-203ENST00000554514 LOC105371242A0A075B767 164 aa12.38□□□□□ -0.43
ARHGEF40-203ENST00000554514 IGHV3-35A0A0C4DH35 117 aa12.38□□□□□ -0.43
ARHGEF40-203ENST00000554514 IGLV2-11P01706 119 aa12.38□□□□□ -0.43
ARHGEF40-203ENST00000554514 HLA-DRB1P01911 266 aa12.38□□□□□ -0.43
ARHGEF40-203ENST00000554514 ZC2HC1AQ96GY0 325 aa12.38□□□□□ -0.43
ARHGEF40-203ENST00000554514 URB1-AS1Q96HZ7 61 aa12.38□□□□□ -0.43
ARHGEF40-203ENST00000554514 H0Y8G0 127 aa12.37□□□□□ -0.43
ARHGEF40-203ENST00000554514 OR2J3O76001 311 aa12.37□□□□□ -0.43
ARHGEF40-203ENST00000554514 CTRLP40313 264 aa12.37□□□□□ -0.43
ARHGEF40-203ENST00000554514 ZNF491Q8N8L2 437 aa12.37□□□□□ -0.43
ARHGEF40-203ENST00000554514 SHANK2-AS3Q9BTD1 123 aa12.37□□□□□ -0.43
ARHGEF40-203ENST00000554514 TRBV19A0A075B6N1 114 aa12.37□□□□□ -0.43
ARHGEF40-203ENST00000554514 ADORA2A-AS1P86434 159 aa12.37□□□□□ -0.43
ARHGEF40-203ENST00000554514 KLF5Q13887 457 aaPredicted RBP12.37□□□□□ -0.43
ARHGEF40-203ENST00000554514 SMIM12Q96EX1 92 aa12.37□□□□□ -0.43
ARHGEF40-203ENST00000554514 ZNF492Q9P255 531 aa12.37□□□□□ -0.43
ARHGEF40-203ENST00000554514 TMSB15BA0A087X1C1 80 aa12.36□□□□□ -0.43
ARHGEF40-203ENST00000554514 LINC00173Q6ZV60 143 aa12.36□□□□□ -0.43
ARHGEF40-203ENST00000554514 SPATA12Q7Z6I5 190 aa12.36□□□□□ -0.43
ARHGEF40-203ENST00000554514 CFHR4Q92496 578 aa12.36□□□□□ -0.43
ARHGEF40-203ENST00000554514 DYNAPQ8N1N2 210 aa12.36□□□□□ -0.43
ARHGEF40-203ENST00000554514 LY6G5BQ8NDX9 201 aa12.36□□□□□ -0.43
ARHGEF40-203ENST00000554514 TMEM14CQ9P0S9 112 aa12.36□□□□□ -0.43
ARHGEF40-203ENST00000554514 H3BRN7 92 aa12.35□□□□□ -0.43
ARHGEF40-203ENST00000554514 M0QZK8 103 aa12.35□□□□□ -0.43
ARHGEF40-203ENST00000554514 IGLC2P0DOY2 106 aa12.35□□□□□ -0.43
ARHGEF40-203ENST00000554514 IGLC3P0DOY3 106 aa12.35□□□□□ -0.43
ARHGEF40-203ENST00000554514 CEACAM3P40198 252 aa12.35□□□□□ -0.43
ARHGEF40-203ENST00000554514 HNRNPA3P51991 378 aaKnown RBP12.35□□□□□ -0.43
ARHGEF40-203ENST00000554514 NDUFS7O75251 213 aa12.35□□□□□ -0.43
ARHGEF40-203ENST00000554514 NDPQ00604 133 aa12.35□□□□□ -0.43
ARHGEF40-203ENST00000554514 MCRIP2Q9BUT9 160 aaKnown RBP12.35□□□□□ -0.43
ARHGEF40-203ENST00000554514 UQCR10Q9UDW1 63 aa12.35□□□□□ -0.43
ARHGEF40-203ENST00000554514 SPTBN4Q9H254 2564 aa12.35□□□□□ -0.43
ARHGEF40-203ENST00000554514 MUC21A0A0G2JKD1 596 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms