RNA–Protein interactions for RNA: ENST00000554233.1

IFT43-207, Transcript of intraflagellar transport 43, humanhuman

TSL 3

Gene IFT43, Length 635 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-207ENST00000554233 AMTP48728 403 aa3.42□□□□□ -1.86
IFT43-207ENST00000554233 CCR6P51684 374 aa3.42□□□□□ -1.86
IFT43-207ENST00000554233 RAB25P57735 213 aa3.42□□□□□ -1.86
IFT43-207ENST00000554233 ERHP84090 104 aaKnown RBP3.42□□□□□ -1.86
IFT43-207ENST00000554233 DEFA5Q01523 94 aa3.42□□□□□ -1.86
IFT43-207ENST00000554233 EWSR1Q01844 656 aaKnown RBP eCLIP3.42□□□□□ -1.86
IFT43-207ENST00000554233 SCGB2B2Q4G0G5 96 aa3.42□□□□□ -1.86
IFT43-207ENST00000554233 C2orf83Q53S99 150 aa3.42□□□□□ -1.86
IFT43-207ENST00000554233 CLEC19AQ6UXS0 136 aa3.42□□□□□ -1.86
IFT43-207ENST00000554233 UNQ9165/PRO28630Q6UXU0 137 aa3.42□□□□□ -1.86
IFT43-207ENST00000554233 SGPP2Q8IWX5 399 aa3.42□□□□□ -1.86
IFT43-207ENST00000554233 TOMM5Q8N4H5 51 aa3.42□□□□□ -1.86
IFT43-207ENST00000554233 MAPKAPK5-AS1Q8N8E1 139 aa3.42□□□□□ -1.86
IFT43-207ENST00000554233 OR4X1Q8NH49 305 aa3.42□□□□□ -1.86
IFT43-207ENST00000554233 C7orf50Q9BRJ6 194 aaKnown RBP3.42□□□□□ -1.86
IFT43-207ENST00000554233 DAZ1Q9NQZ3 744 aaKnown RBP3.42□□□□□ -1.86
IFT43-207ENST00000554233 C21orf62Q9NYP8 219 aa3.42□□□□□ -1.86
IFT43-207ENST00000554233 C14orf166Q9Y224 244 aaKnown RBP3.42□□□□□ -1.86
IFT43-207ENST00000554233 KCNIP3Q9Y2W7 256 aa3.42□□□□□ -1.86
IFT43-207ENST00000554233 TRAV2A0A0B4J234 112 aa3.41□□□□□ -1.86
IFT43-207ENST00000554233 IZUMO1RA6ND01 250 aa3.41□□□□□ -1.86
IFT43-207ENST00000554233 NDUFB6O95139 128 aa3.41□□□□□ -1.86
IFT43-207ENST00000554233 TMEM50AO95807 157 aa3.41□□□□□ -1.86
IFT43-207ENST00000554233 IGKV1-17P01599 117 aa3.41□□□□□ -1.86
IFT43-207ENST00000554233 SULT1A3P0DMM9 295 aa3.41□□□□□ -1.86
IFT43-207ENST00000554233 SULT1A4P0DMN0 295 aa3.41□□□□□ -1.86
IFT43-207ENST00000554233 P2RY1P47900 373 aa3.41□□□□□ -1.86
IFT43-207ENST00000554233 FHITP49789 147 aa3.41□□□□□ -1.86
IFT43-207ENST00000554233 AKR1C2P52895 323 aa3.41□□□□□ -1.86
IFT43-207ENST00000554233 SUB1P53999 127 aaKnown RBP eCLIP3.41□□□□□ -1.86
IFT43-207ENST00000554233 TNFRSF9Q07011 255 aa3.41□□□□□ -1.86
IFT43-207ENST00000554233 IZUMO4Q1ZYL8 232 aa3.41□□□□□ -1.86
IFT43-207ENST00000554233 SP6Q3SY56 376 aa3.41□□□□□ -1.86
IFT43-207ENST00000554233 PYDC2Q56P42 97 aa3.41□□□□□ -1.86
IFT43-207ENST00000554233 PLET1Q6UQ28 207 aa3.41□□□□□ -1.86
IFT43-207ENST00000554233 TMEM61Q8N0U2 210 aa3.41□□□□□ -1.86
IFT43-207ENST00000554233 LGI3Q8N145 548 aa3.41□□□□□ -1.86
IFT43-207ENST00000554233 SLC35G3Q8N808 338 aa3.41□□□□□ -1.86
IFT43-207ENST00000554233 RNASEH2CQ8TDP1 164 aaKnown RBP3.41□□□□□ -1.86
IFT43-207ENST00000554233 GPR146Q96CH1 333 aa3.41□□□□□ -1.86
IFT43-207ENST00000554233 FNDC4Q9H6D8 234 aaPredicted RBP3.41□□□□□ -1.86
IFT43-207ENST00000554233 VSIRQ9H7M9 311 aa3.41□□□□□ -1.86
IFT43-207ENST00000554233 PLEKHA3Q9HB20 300 aa3.41□□□□□ -1.86
IFT43-207ENST00000554233 MBD2Q9UBB5 411 aa3.41□□□□□ -1.86
IFT43-207ENST00000554233 MLXQ9UH92 298 aa3.41□□□□□ -1.86
IFT43-207ENST00000554233 UFC1Q9Y3C8 167 aa3.41□□□□□ -1.86
IFT43-207ENST00000554233 U3KQ87 197 aa3.41□□□□□ -1.86
IFT43-207ENST00000554233 SACSQ9NZJ4 4579 aa3.41□□□□□ -1.86
IFT43-207ENST00000554233 TRAV30A0A087WSZ9 112 aa3.4□□□□□ -1.87
IFT43-207ENST00000554233 OR2T8A6NH00 312 aa3.4□□□□□ -1.87
IFT43-207ENST00000554233 PLA2G10O15496 165 aa3.4□□□□□ -1.87
IFT43-207ENST00000554233 NUPL2O15504 423 aaKnown RBP3.4□□□□□ -1.87
IFT43-207ENST00000554233 SFT2D2O95562 160 aa3.4□□□□□ -1.87
IFT43-207ENST00000554233 MT-CO2P00403 227 aa3.4□□□□□ -1.87
IFT43-207ENST00000554233 FRMD6-AS1P0C7T7 363 aa3.4□□□□□ -1.87
IFT43-207ENST00000554233 SLC25A4P12235 298 aa3.4□□□□□ -1.87
IFT43-207ENST00000554233 IL7P13232 177 aa3.4□□□□□ -1.87
IFT43-207ENST00000554233 CRYBB3P26998 211 aa3.4□□□□□ -1.87
IFT43-207ENST00000554233 GPR183P32249 361 aa3.4□□□□□ -1.87
IFT43-207ENST00000554233 RPL13AP40429 203 aaKnown RBP3.4□□□□□ -1.87
IFT43-207ENST00000554233 YPEL3P61236 119 aaPredicted RBP3.4□□□□□ -1.87
IFT43-207ENST00000554233 SRSF9Q13242 221 aaKnown RBP eCLIP3.4□□□□□ -1.87
IFT43-207ENST00000554233 SMCO1Q147U7 214 aa3.4□□□□□ -1.87
IFT43-207ENST00000554233 TRIM16LQ309B1 348 aa3.4□□□□□ -1.87
IFT43-207ENST00000554233 DEFB121Q5J5C9 76 aa3.4□□□□□ -1.87
IFT43-207ENST00000554233 ZNF57Q68EA5 555 aaPredicted RBP3.4□□□□□ -1.87
IFT43-207ENST00000554233 LYZL2Q7Z4W2 148 aa3.4□□□□□ -1.87
IFT43-207ENST00000554233 SBSPONQ8IVN8 264 aa3.4□□□□□ -1.87
IFT43-207ENST00000554233 NEXN-AS1Q8NBZ9 246 aa3.4□□□□□ -1.87
IFT43-207ENST00000554233 CACNG8Q8WXS5 425 aa3.4□□□□□ -1.87
IFT43-207ENST00000554233 URB1-AS1Q96HZ7 61 aa3.4□□□□□ -1.87
IFT43-207ENST00000554233 CCDC32Q9BV29 185 aa3.4□□□□□ -1.87
IFT43-207ENST00000554233 MRPL36Q9P0J6 103 aaKnown RBP3.4□□□□□ -1.87
IFT43-207ENST00000554233 CACNG5Q9UF02 275 aa3.4□□□□□ -1.87
IFT43-207ENST00000554233 SMPXQ9UHP9 88 aa3.4□□□□□ -1.87
IFT43-207ENST00000554233 U3KQK5 164 aa3.4□□□□□ -1.87
IFT43-207ENST00000554233 DNAH1Q9P2D7 4330 aa3.39□□□□□ -1.87
IFT43-207ENST00000554233 A0A087WZ39 114 aa3.39□□□□□ -1.87
IFT43-207ENST00000554233 IGHV7-4-1A0A0J9YVY3 117 aa3.39□□□□□ -1.87
IFT43-207ENST00000554233 C9orf170A2RU37 121 aa3.39□□□□□ -1.87
IFT43-207ENST00000554233 RBMY1BA6NDE4 496 aaKnown RBP3.39□□□□□ -1.87
IFT43-207ENST00000554233 RBMY1EA6NEQ0 496 aaKnown RBP3.39□□□□□ -1.87
IFT43-207ENST00000554233 CCDC160A6NGH7 325 aa3.39□□□□□ -1.87
IFT43-207ENST00000554233 FAM74A7A6NL05 159 aa3.39□□□□□ -1.87
IFT43-207ENST00000554233 IFITM10A6NMD0 228 aa3.39□□□□□ -1.87
IFT43-207ENST00000554233 CDK2AP2O75956 126 aa3.39□□□□□ -1.87
IFT43-207ENST00000554233 IFNA17P01571 189 aa3.39□□□□□ -1.87
IFT43-207ENST00000554233 IGHV3-23P01764 117 aa3.39□□□□□ -1.87
IFT43-207ENST00000554233 RBMY1DP0C7P1 496 aaKnown RBP3.39□□□□□ -1.87
IFT43-207ENST00000554233 IGLC1P0CG04 106 aa3.39□□□□□ -1.87
IFT43-207ENST00000554233 AKR1C4P17516 323 aa3.39□□□□□ -1.87
IFT43-207ENST00000554233 GPX4P36969 197 aaPredicted RBP3.39□□□□□ -1.87
IFT43-207ENST00000554233 SNCAP37840 140 aa3.39□□□□□ -1.87
IFT43-207ENST00000554233 DHRS2Q13268 280 aa3.39□□□□□ -1.87
IFT43-207ENST00000554233 PPP1R1AQ13522 171 aa3.39□□□□□ -1.87
IFT43-207ENST00000554233 PLECQ15149 4684 aaKnown RBP3.39□□□□□ -1.87
IFT43-207ENST00000554233 FAM74A3Q4VXF1 159 aa3.39□□□□□ -1.87
IFT43-207ENST00000554233 PRSS54Q6PEW0 395 aa3.39□□□□□ -1.87
IFT43-207ENST00000554233 UQCC3Q6UW78 93 aa3.39□□□□□ -1.87
IFT43-207ENST00000554233 TOMM20LQ6UXN7 152 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms