RNA–Protein interactions for RNA: ENST00000553622.5

CHD8-204, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 3

Gene CHD8, Length 633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-204ENST00000553622 DPPA3Q6W0C5 159 aa7.44□□□□□ -1.22
CHD8-204ENST00000553622 ZNF767PQ75MW2 155 aa7.44□□□□□ -1.22
CHD8-204ENST00000553622 SSX7Q7RTT5 188 aa7.44□□□□□ -1.22
CHD8-204ENST00000553622 SFT2D1Q8WV19 159 aa7.44□□□□□ -1.22
CHD8-204ENST00000553622 RHPN1-AS1Q9BWJ2 59 aa7.44□□□□□ -1.22
CHD8-204ENST00000553622 SLC25A2Q9BXI2 301 aa7.44□□□□□ -1.22
CHD8-204ENST00000553622 MAP1LC3BQ9GZQ8 125 aa7.44□□□□□ -1.22
CHD8-204ENST00000553622 TMEM231Q9H6L2 316 aa7.44□□□□□ -1.22
CHD8-204ENST00000553622 SMPXQ9UHP9 88 aa7.44□□□□□ -1.22
CHD8-204ENST00000553622 IGKV3-7A0A075B6H7 116 aa7.43□□□□□ -1.22
CHD8-204ENST00000553622 ZNF785A8K8V0 405 aa7.43□□□□□ -1.22
CHD8-204ENST00000553622 SEC14L6B5MCN3 397 aa7.43□□□□□ -1.22
CHD8-204ENST00000553622 SNRPCP09234 159 aaKnown RBP7.43□□□□□ -1.22
CHD8-204ENST00000553622 OR10J4P0C629 311 aa7.43□□□□□ -1.22
CHD8-204ENST00000553622 ARL14EPLP0DKL9 152 aa7.43□□□□□ -1.22
CHD8-204ENST00000553622 C8orf88P0DMB2 117 aa7.43□□□□□ -1.22
CHD8-204ENST00000553622 ATF4P18848 351 aaPredicted RBP7.43□□□□□ -1.22
CHD8-204ENST00000553622 CD33P20138 364 aa7.43□□□□□ -1.22
CHD8-204ENST00000553622 CBLN1P23435 193 aa7.43□□□□□ -1.22
CHD8-204ENST00000553622 BLOC1S1P78537 153 aa7.43□□□□□ -1.22
CHD8-204ENST00000553622 ZNF726P1Q15940 193 aa7.43□□□□□ -1.22
CHD8-204ENST00000553622 PAXXQ9BUH6 204 aa7.43□□□□□ -1.22
CHD8-204ENST00000553622 RNF24Q9Y225 148 aa7.43□□□□□ -1.22
CHD8-204ENST00000553622 TEX46H3BTG2 121 aa7.42□□□□□ -1.22
CHD8-204ENST00000553622 H3BTX0 84 aa7.42□□□□□ -1.22
CHD8-204ENST00000553622 CHEK1O14757 476 aa7.42□□□□□ -1.22
CHD8-204ENST00000553622 BUB3O43684 328 aa7.42□□□□□ -1.22
CHD8-204ENST00000553622 SAP30O75446 220 aa7.42□□□□□ -1.22
CHD8-204ENST00000553622 CXorf1O96002 111 aa7.42□□□□□ -1.22
CHD8-204ENST00000553622 CSN3P07498 182 aa7.42□□□□□ -1.22
CHD8-204ENST00000553622 PYYP10082 97 aa7.42□□□□□ -1.22
CHD8-204ENST00000553622 RPL7P18124 248 aaKnown RBP7.42□□□□□ -1.22
CHD8-204ENST00000553622 GALR1P47211 349 aa7.42□□□□□ -1.22
CHD8-204ENST00000553622 UBE2L3P68036 154 aaKnown RBP7.42□□□□□ -1.22
CHD8-204ENST00000553622 IL34Q6ZMJ4 242 aa7.42□□□□□ -1.22
CHD8-204ENST00000553622 TCF24Q7RTU0 167 aa7.42□□□□□ -1.22
CHD8-204ENST00000553622 BPIFA4PQ86YQ2 179 aa7.42□□□□□ -1.22
CHD8-204ENST00000553622 LINC00482Q8N8I6 264 aa7.42□□□□□ -1.22
CHD8-204ENST00000553622 LRRC20Q8TCA0 184 aa7.42□□□□□ -1.22
CHD8-204ENST00000553622 BLNKQ8WV28 456 aa7.42□□□□□ -1.22
CHD8-204ENST00000553622 MARC2Q969Z3 335 aa7.42□□□□□ -1.22
CHD8-204ENST00000553622 HRH4Q9H3N8 390 aa7.42□□□□□ -1.22
CHD8-204ENST00000553622 U3KQE9 123 aa7.42□□□□□ -1.22
CHD8-204ENST00000553622 SORL1Q92673 2214 aa7.42□□□□□ -1.22
CHD8-204ENST00000553622 HBE1P02100 147 aa7.41□□□□□ -1.22
CHD8-204ENST00000553622 STAG3L2P0CL84 134 aa7.41□□□□□ -1.22
CHD8-204ENST00000553622 STAG3L3P0CL85 134 aa7.41□□□□□ -1.22
CHD8-204ENST00000553622 GCHFRP30047 84 aa7.41□□□□□ -1.22
CHD8-204ENST00000553622 C1orf194Q5T5A4 169 aa7.41□□□□□ -1.22
CHD8-204ENST00000553622 C16orf54Q6UWD8 224 aa7.41□□□□□ -1.22
CHD8-204ENST00000553622 SIGLEC15Q6ZMC9 328 aa7.41□□□□□ -1.22
CHD8-204ENST00000553622 PQLC2Q6ZP29 291 aa7.41□□□□□ -1.22
CHD8-204ENST00000553622 GBGT1Q8N5D6 347 aa7.41□□□□□ -1.22
CHD8-204ENST00000553622 STXBP6Q8NFX7 210 aa7.41□□□□□ -1.22
CHD8-204ENST00000553622 GLMPQ8WWB7 406 aa7.41□□□□□ -1.22
CHD8-204ENST00000553622 SAT2Q96F10 170 aaPredicted RBP7.41□□□□□ -1.22
CHD8-204ENST00000553622 FAM167A-AS1Q96KT0 104 aa7.41□□□□□ -1.22
CHD8-204ENST00000553622 OR51M1Q9H341 326 aa7.41□□□□□ -1.22
CHD8-204ENST00000553622 TMPRSS5Q9H3S3 457 aa7.41□□□□□ -1.22
CHD8-204ENST00000553622 MLXQ9UH92 298 aa7.41□□□□□ -1.22
CHD8-204ENST00000553622 HELTA6NFD8 242 aa7.4□□□□□ -1.22
CHD8-204ENST00000553622 TFPI2P48307 235 aa7.4□□□□□ -1.22
CHD8-204ENST00000553622 UBE2G2P60604 165 aa7.4□□□□□ -1.22
CHD8-204ENST00000553622 ADAMTSL5Q6ZMM2 481 aa7.4□□□□□ -1.22
CHD8-204ENST00000553622 RBPMS2Q6ZRY4 209 aaKnown RBP7.4□□□□□ -1.22
CHD8-204ENST00000553622 WFDC3Q8IUB2 231 aa7.4□□□□□ -1.22
CHD8-204ENST00000553622 SPATA3Q8NHX4 192 aa7.4□□□□□ -1.22
CHD8-204ENST00000553622 MBD3L1Q8WWY6 194 aa7.4□□□□□ -1.22
CHD8-204ENST00000553622 GPR82Q96P67 336 aa7.4□□□□□ -1.22
CHD8-204ENST00000553622 NOTCH3Q9UM47 2321 aa7.4□□□□□ -1.23
CHD8-204ENST00000553622 DNASE2O00115 360 aaPredicted RBP7.39□□□□□ -1.23
CHD8-204ENST00000553622 NMBP08949 121 aa7.39□□□□□ -1.23
CHD8-204ENST00000553622 GP9P14770 177 aa7.39□□□□□ -1.23
CHD8-204ENST00000553622 CCL20P78556 96 aa7.39□□□□□ -1.23
CHD8-204ENST00000553622 GUCA2BQ16661 112 aa7.39□□□□□ -1.23
CHD8-204ENST00000553622 FXYD5Q96DB9 178 aa7.39□□□□□ -1.23
CHD8-204ENST00000553622 ZNF503Q96F45 646 aa7.39□□□□□ -1.23
CHD8-204ENST00000553622 TMEM167BQ9NRX6 74 aa7.39□□□□□ -1.23
CHD8-204ENST00000553622 TMEM14CQ9P0S9 112 aa7.39□□□□□ -1.23
CHD8-204ENST00000553622 GNG13Q9P2W3 67 aa7.39□□□□□ -1.23
CHD8-204ENST00000553622 H3BQ15 152 aa7.38□□□□□ -1.23
CHD8-204ENST00000553622 RGS13O14921 159 aa7.38□□□□□ -1.23
CHD8-204ENST00000553622 NBEAP1P0C6P0 100 aa7.38□□□□□ -1.23
CHD8-204ENST00000553622 HIST1H1EP10412 219 aaKnown RBP7.38□□□□□ -1.23
CHD8-204ENST00000553622 HAGHQ16775 308 aa7.38□□□□□ -1.23
CHD8-204ENST00000553622 DEFB114Q30KQ6 69 aa7.38□□□□□ -1.23
CHD8-204ENST00000553622 CD300EQ496F6 205 aaPredicted RBP7.38□□□□□ -1.23
CHD8-204ENST00000553622 CST9LP1Q5W188 147 aa7.38□□□□□ -1.23
CHD8-204ENST00000553622 C17orf77Q96MU5 243 aa7.38□□□□□ -1.23
CHD8-204ENST00000553622 ZNF586Q9NXT0 402 aa7.38□□□□□ -1.23
CHD8-204ENST00000553622 SMAD5-AS1Q9Y6J3 95 aa7.38□□□□□ -1.23
CHD8-204ENST00000553622 TRAV1-1A0A0B4J248 108 aa7.37□□□□□ -1.23
CHD8-204ENST00000553622 MRPS12O15235 138 aaKnown RBP7.37□□□□□ -1.23
CHD8-204ENST00000553622 IFNA1P01562 189 aa7.37□□□□□ -1.23
CHD8-204ENST00000553622 IGLC2P0DOY2 106 aa7.37□□□□□ -1.23
CHD8-204ENST00000553622 IGLL1P15814 213 aa7.37□□□□□ -1.23
CHD8-204ENST00000553622 PSMB3P49720 205 aa7.37□□□□□ -1.23
CHD8-204ENST00000553622 RANP62826 216 aaKnown RBP7.37□□□□□ -1.23
CHD8-204ENST00000553622 PAFAH1B2P68402 229 aa7.37□□□□□ -1.23
CHD8-204ENST00000553622 CLLU1Q5K131 121 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 107.5 ms