RNA–Protein interactions for RNA: ENST00000546744.5

PTCH1-212, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 4,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-212ENST00000546744 ABHD17AQ96GS6 310 aa10.5□□□□□ -0.73
PTCH1-212ENST00000546744 DNAJC30Q96LL9 226 aa10.5□□□□□ -0.73
PTCH1-212ENST00000546744 DPH3P1Q9H4G8 78 aa10.5□□□□□ -0.73
PTCH1-212ENST00000546744 CCL25O15444 150 aa10.49□□□□□ -0.73
PTCH1-212ENST00000546744 KLK10O43240 276 aa10.49□□□□□ -0.73
PTCH1-212ENST00000546744 STPG1Q5TH74 334 aa10.49□□□□□ -0.73
PTCH1-212ENST00000546744 SCRT1Q9BWW7 348 aa10.49□□□□□ -0.73
PTCH1-212ENST00000546744 TICRRQ7Z2Z1 1910 aa10.49□□□□□ -0.73
PTCH1-212ENST00000546744 Q6P435 159 aa10.49□□□□□ -0.73
PTCH1-212ENST00000546744 RTTNQ86VV8 2226 aa10.49□□□□□ -0.73
PTCH1-212ENST00000546744 DUSP14O95147 198 aaKnown RBP10.49□□□□□ -0.73
PTCH1-212ENST00000546744 RRN3P1Q2M238 152 aa10.49□□□□□ -0.73
PTCH1-212ENST00000546744 FAM104BQ5XKR9 115 aa10.49□□□□□ -0.73
PTCH1-212ENST00000546744 SPACA3Q8IXA5 215 aa10.49□□□□□ -0.73
PTCH1-212ENST00000546744 PRSS46E5RG02 174 aa10.48□□□□□ -0.73
PTCH1-212ENST00000546744 H3BMM0 161 aa10.48□□□□□ -0.73
PTCH1-212ENST00000546744 C1orf210Q8IVY1 113 aa10.48□□□□□ -0.73
PTCH1-212ENST00000546744 TMEM75Q8N9X5 138 aa10.48□□□□□ -0.73
PTCH1-212ENST00000546744 TMEM158Q8WZ71 300 aa10.48□□□□□ -0.73
PTCH1-212ENST00000546744 UBE2WQ96B02 151 aa10.48□□□□□ -0.73
PTCH1-212ENST00000546744 C9JAW5 83 aa10.48□□□□□ -0.73
PTCH1-212ENST00000546744 TRIP6Q15654 476 aaKnown RBP10.48□□□□□ -0.73
PTCH1-212ENST00000546744 SPAG8Q99932 426 aaPredicted RBP10.48□□□□□ -0.73
PTCH1-212ENST00000546744 TMEM133Q9H2Q1 129 aa10.48□□□□□ -0.73
PTCH1-212ENST00000546744 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.48□□□□□ -0.73
PTCH1-212ENST00000546744 SFTA2Q6UW10 78 aa10.48□□□□□ -0.73
PTCH1-212ENST00000546744 DCTN5Q9BTE1 182 aa10.48□□□□□ -0.73
PTCH1-212ENST00000546744 FAM90A27PA6NNH2 459 aa10.47□□□□□ -0.73
PTCH1-212ENST00000546744 SLC25A20O43772 301 aa10.47□□□□□ -0.73
PTCH1-212ENST00000546744 RFPL3SP0C7P2 107 aa10.47□□□□□ -0.73
PTCH1-212ENST00000546744 POU2AF1Q16633 256 aa10.47□□□□□ -0.73
PTCH1-212ENST00000546744 FAM216BQ8N7L0 139 aa10.47□□□□□ -0.73
PTCH1-212ENST00000546744 MKI67P46013 3256 aaKnown RBP10.47□□□□□ -0.73
PTCH1-212ENST00000546744 ARHGEF17Q96PE2 2063 aaPredicted RBP10.47□□□□□ -0.73
PTCH1-212ENST00000546744 ZNF688P0C7X2 276 aa10.47□□□□□ -0.73
PTCH1-212ENST00000546744 BMPERQ8N8U9 685 aa10.47□□□□□ -0.73
PTCH1-212ENST00000546744 TRGV11A0A075B6L2 103 aa10.47□□□□□ -0.73
PTCH1-212ENST00000546744 OOSP1A8MZH6 123 aa10.47□□□□□ -0.73
PTCH1-212ENST00000546744 FOXH1O75593 365 aa10.47□□□□□ -0.73
PTCH1-212ENST00000546744 FCN3O75636 299 aa10.47□□□□□ -0.73
PTCH1-212ENST00000546744 RNASE2P10153 161 aaKnown RBP10.47□□□□□ -0.73
PTCH1-212ENST00000546744 DOCK9Q9BZ29 2069 aa10.46□□□□□ -0.73
PTCH1-212ENST00000546744 K7EMI3 77 aa10.46□□□□□ -0.73
PTCH1-212ENST00000546744 ZNF138P52744 262 aa10.46□□□□□ -0.73
PTCH1-212ENST00000546744 C9orf139Q6ZV77 190 aa10.46□□□□□ -0.73
PTCH1-212ENST00000546744 LHFPL4Q7Z7J7 247 aa10.46□□□□□ -0.73
PTCH1-212ENST00000546744 DMRTC2Q8IXT2 367 aaPredicted RBP10.46□□□□□ -0.73
PTCH1-212ENST00000546744 TMEM86BQ8N661 226 aa10.46□□□□□ -0.73
PTCH1-212ENST00000546744 Q8N8P6 123 aa10.46□□□□□ -0.74
PTCH1-212ENST00000546744 CITED1Q99966 193 aa10.46□□□□□ -0.74
PTCH1-212ENST00000546744 A0A1B0GUS0 222 aa10.46□□□□□ -0.74
PTCH1-212ENST00000546744 CSRP1P21291 193 aaKnown RBP10.46□□□□□ -0.74
PTCH1-212ENST00000546744 C1QTNF4Q9BXJ3 329 aa10.46□□□□□ -0.74
PTCH1-212ENST00000546744 KIF26AQ9ULI4 1882 aaPredicted RBP10.46□□□□□ -0.74
PTCH1-212ENST00000546744 C17orf100A8MU93 164 aa10.45□□□□□ -0.74
PTCH1-212ENST00000546744 NKX2-8O15522 239 aa10.45□□□□□ -0.74
PTCH1-212ENST00000546744 EFNA2O43921 213 aa10.45□□□□□ -0.74
PTCH1-212ENST00000546744 LINC01545Q5VT33 79 aa10.45□□□□□ -0.74
PTCH1-212ENST00000546744 CDCP2Q5VXM1 449 aa10.45□□□□□ -0.74
PTCH1-212ENST00000546744 COLCA1Q6ZS62 124 aa10.45□□□□□ -0.74
PTCH1-212ENST00000546744 TTC28Q96AY4 2481 aa10.45□□□□□ -0.74
PTCH1-212ENST00000546744 PMS2P5A8MQ11 134 aa10.45□□□□□ -0.74
PTCH1-212ENST00000546744 CEACAM8P31997 349 aaPredicted RBP10.45□□□□□ -0.74
PTCH1-212ENST00000546744 CEND1Q8N111 149 aa10.45□□□□□ -0.74
PTCH1-212ENST00000546744 NPIPB5A8MRT5 1133 aa10.45□□□□□ -0.74
PTCH1-212ENST00000546744 SH2D1AO60880 128 aa10.45□□□□□ -0.74
PTCH1-212ENST00000546744 CD28P10747 220 aa10.45□□□□□ -0.74
PTCH1-212ENST00000546744 IGHV1-2P23083 117 aa10.45□□□□□ -0.74
PTCH1-212ENST00000546744 LMO1P25800 156 aa10.45□□□□□ -0.74
PTCH1-212ENST00000546744 APOBEC3AP31941 199 aaPredicted RBP10.45□□□□□ -0.74
PTCH1-212ENST00000546744 TMEM141Q96I45 108 aa10.45□□□□□ -0.74
PTCH1-212ENST00000546744 LINC00477Q96M19 166 aa10.45□□□□□ -0.74
PTCH1-212ENST00000546744 MYOD1P15172 320 aa10.44□□□□□ -0.74
PTCH1-212ENST00000546744 CLEC2AQ6UVW9 174 aa10.44□□□□□ -0.74
PTCH1-212ENST00000546744 MYMXA0A1B0GTQ4 84 aa10.44□□□□□ -0.74
PTCH1-212ENST00000546744 PSPNO60542 156 aa10.44□□□□□ -0.74
PTCH1-212ENST00000546744 EVI2AP22794 236 aa10.44□□□□□ -0.74
PTCH1-212ENST00000546744 VWC2Q2TAL6 325 aa10.44□□□□□ -0.74
PTCH1-212ENST00000546744 ZCCHC24Q8N2G6 241 aaKnown RBP10.44□□□□□ -0.74
PTCH1-212ENST00000546744 TMEM14BQ9NUH8 114 aa10.44□□□□□ -0.74
PTCH1-212ENST00000546744 ACYP1P07311 99 aa10.44□□□□□ -0.74
PTCH1-212ENST00000546744 RSPO4Q2I0M5 234 aaPredicted RBP10.44□□□□□ -0.74
PTCH1-212ENST00000546744 RNASE8Q8TDE3 154 aaKnown RBP10.44□□□□□ -0.74
PTCH1-212ENST00000546744 SIGLEC8Q9NYZ4 499 aa10.44□□□□□ -0.74
PTCH1-212ENST00000546744 TRGV3P03979 118 aa10.44□□□□□ -0.74
PTCH1-212ENST00000546744 HLA-DMBP28068 263 aa10.44□□□□□ -0.74
PTCH1-212ENST00000546744 LINC00473A8K010 186 aa10.43□□□□□ -0.74
PTCH1-212ENST00000546744 AMN1Q8IY45 258 aa10.43□□□□□ -0.74
PTCH1-212ENST00000546744 EDA2RQ9HAV5 297 aa10.43□□□□□ -0.74
PTCH1-212ENST00000546744 NCR2O95944 276 aa10.43□□□□□ -0.74
PTCH1-212ENST00000546744 CLPSP04118 112 aa10.43□□□□□ -0.74
PTCH1-212ENST00000546744 NEU4Q8WWR8 484 aaPredicted RBP10.43□□□□□ -0.74
PTCH1-212ENST00000546744 RASL10AQ92737 203 aa10.43□□□□□ -0.74
PTCH1-212ENST00000546744 PLXNA2O75051 1894 aa10.43□□□□□ -0.74
PTCH1-212ENST00000546744 IGKV1D-33P01593 117 aa10.43□□□□□ -0.74
PTCH1-212ENST00000546744 IGKV1-33P01594 117 aa10.43□□□□□ -0.74
PTCH1-212ENST00000546744 CRPP02741 224 aa10.43□□□□□ -0.74
PTCH1-212ENST00000546744 ARMS2P0C7Q2 107 aa10.43□□□□□ -0.74
PTCH1-212ENST00000546744 CDPF1Q6NVV7 123 aa10.43□□□□□ -0.74
PTCH1-212ENST00000546744 Q8NFD4 153 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 168.4 ms