RNA–Protein interactions for RNA: ENST00000546534.1

SCAF11-208, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 705 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-208ENST00000546534 UBR4Q5T4S7 5183 aa8.77□□□□□ -1.01
SCAF11-208ENST00000546534 SMIM31A0A1B0GVY4 71 aa8.76□□□□□ -1.01
SCAF11-208ENST00000546534 ZNF701M0R085 212 aaPredicted RBP8.76□□□□□ -1.01
SCAF11-208ENST00000546534 CD3DP04234 171 aa8.76□□□□□ -1.01
SCAF11-208ENST00000546534 OR5AC1P0C628 307 aa8.76□□□□□ -1.01
SCAF11-208ENST00000546534 M6PRP20645 277 aa8.76□□□□□ -1.01
SCAF11-208ENST00000546534 GALR1P47211 349 aa8.76□□□□□ -1.01
SCAF11-208ENST00000546534 TAS2R60P59551 318 aa8.76□□□□□ -1.01
SCAF11-208ENST00000546534 RNASE12Q5GAN4 147 aaKnown RBP8.76□□□□□ -1.01
SCAF11-208ENST00000546534 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.76□□□□□ -1.01
SCAF11-208ENST00000546534 MARCH1Q8TCQ1 289 aa8.76□□□□□ -1.01
SCAF11-208ENST00000546534 C16orf74Q96GX8 76 aa8.76□□□□□ -1.01
SCAF11-208ENST00000546534 COMMD3Q9UBI1 195 aa8.76□□□□□ -1.01
SCAF11-208ENST00000546534 SRRM2Q9UQ35 2752 aaKnown RBP8.76□□□□□ -1.01
SCAF11-208ENST00000546534 TEX13DA0A0J9YY54 714 aaPredicted RBP8.75□□□□□ -1.01
SCAF11-208ENST00000546534 BOLA2-SMG1P6H3BVE0 249 aa8.75□□□□□ -1.01
SCAF11-208ENST00000546534 HOXA5P20719 270 aa8.75□□□□□ -1.01
SCAF11-208ENST00000546534 NEDD8Q15843 81 aa8.75□□□□□ -1.01
SCAF11-208ENST00000546534 RNF182Q8N6D2 247 aa8.75□□□□□ -1.01
SCAF11-208ENST00000546534 OR4D10Q8NGI6 311 aa8.75□□□□□ -1.01
SCAF11-208ENST00000546534 OR10J6PQ8NGY7 276 aa8.75□□□□□ -1.01
SCAF11-208ENST00000546534 TERB2Q8NHR7 220 aa8.75□□□□□ -1.01
SCAF11-208ENST00000546534 SLC25A22Q9H936 323 aa8.75□□□□□ -1.01
SCAF11-208ENST00000546534 U3KQ87 197 aa8.75□□□□□ -1.01
SCAF11-208ENST00000546534 TRAV8-2A0A0B4J237 113 aa8.74□□□□□ -1.01
SCAF11-208ENST00000546534 APOA1P02647 267 aa8.74□□□□□ -1.01
SCAF11-208ENST00000546534 FABP1P07148 127 aa8.74□□□□□ -1.01
SCAF11-208ENST00000546534 ERVFC1-1P60608 527 aa8.74□□□□□ -1.01
SCAF11-208ENST00000546534 ICAM4Q14773 271 aa8.74□□□□□ -1.01
SCAF11-208ENST00000546534 SCGB2B2Q4G0G5 96 aa8.74□□□□□ -1.01
SCAF11-208ENST00000546534 TMEM268Q5VZI3 342 aa8.74□□□□□ -1.01
SCAF11-208ENST00000546534 TMEM144Q7Z5S9 345 aa8.74□□□□□ -1.01
SCAF11-208ENST00000546534 LGI3Q8N145 548 aa8.74□□□□□ -1.01
SCAF11-208ENST00000546534 TMEM256Q8N2U0 113 aa8.74□□□□□ -1.01
SCAF11-208ENST00000546534 RNASE8Q8TDE3 154 aaKnown RBP8.74□□□□□ -1.01
SCAF11-208ENST00000546534 DTD1Q8TEA8 209 aa8.74□□□□□ -1.01
SCAF11-208ENST00000546534 SLC35E1Q96K37 410 aa8.74□□□□□ -1.01
SCAF11-208ENST00000546534 ZNF98A6NK75 572 aa8.73□□□□□ -1.01
SCAF11-208ENST00000546534 GABARAPH6UMI1 98 aa8.73□□□□□ -1.01
SCAF11-208ENST00000546534 GABARAPO95166 117 aa8.73□□□□□ -1.01
SCAF11-208ENST00000546534 IFNA5P01569 189 aa8.73□□□□□ -1.01
SCAF11-208ENST00000546534 SULT1A3P0DMM9 295 aa8.73□□□□□ -1.01
SCAF11-208ENST00000546534 SULT1A4P0DMN0 295 aa8.73□□□□□ -1.01
SCAF11-208ENST00000546534 ZNF182P17025 639 aaPredicted RBP8.73□□□□□ -1.01
SCAF11-208ENST00000546534 GPX4P36969 197 aaPredicted RBP8.73□□□□□ -1.01
SCAF11-208ENST00000546534 LSM3P62310 102 aaKnown RBP8.73□□□□□ -1.01
SCAF11-208ENST00000546534 SUMO1P63165 101 aaKnown RBP8.73□□□□□ -1.01
SCAF11-208ENST00000546534 KIR3DS1Q14943 382 aa8.73□□□□□ -1.01
SCAF11-208ENST00000546534 ZNF493Q6ZR52 646 aa8.73□□□□□ -1.01
SCAF11-208ENST00000546534 LINC00612Q8N6U2 182 aa8.73□□□□□ -1.01
SCAF11-208ENST00000546534 TRGV9Q99603 122 aa8.73□□□□□ -1.01
SCAF11-208ENST00000546534 RTBDNQ9BSG5 229 aaPredicted RBP8.73□□□□□ -1.01
SCAF11-208ENST00000546534 NAA60Q9H7X0 242 aa8.73□□□□□ -1.01
SCAF11-208ENST00000546534 TNFRSF18Q9Y5U5 241 aa8.73□□□□□ -1.01
SCAF11-208ENST00000546534 IGKV1OR2-108A0A075B7D4 117 aa8.72□□□□□ -1.01
SCAF11-208ENST00000546534 H3BNG1 76 aa8.72□□□□□ -1.01
SCAF11-208ENST00000546534 TNFAIP8O95379 198 aa8.72□□□□□ -1.01
SCAF11-208ENST00000546534 DNAH10OSP0CZ25 163 aa8.72□□□□□ -1.01
SCAF11-208ENST00000546534 TBPP20226 339 aa8.72□□□□□ -1.01
SCAF11-208ENST00000546534 RHOBP62745 196 aa8.72□□□□□ -1.01
SCAF11-208ENST00000546534 HAMPP81172 84 aa8.72□□□□□ -1.01
SCAF11-208ENST00000546534 ZNF738Q8NE65 137 aa8.72□□□□□ -1.01
SCAF11-208ENST00000546534 OR52I2Q8NH67 350 aa8.72□□□□□ -1.01
SCAF11-208ENST00000546534 TMEM263Q8WUH6 116 aaKnown RBP8.72□□□□□ -1.01
SCAF11-208ENST00000546534 RBKSQ9H477 322 aa8.72□□□□□ -1.01
SCAF11-208ENST00000546534 HSPB7Q9UBY9 170 aa8.72□□□□□ -1.01
SCAF11-208ENST00000546534 CACFD1Q9UGQ2 172 aa8.72□□□□□ -1.01
SCAF11-208ENST00000546534 VPS13BQ7Z7G8 4022 aa8.72□□□□□ -1.01
SCAF11-208ENST00000546534 GAGE12BA1L429 117 aa8.71□□□□□ -1.02
SCAF11-208ENST00000546534 HPGDSO60760 199 aa8.71□□□□□ -1.02
SCAF11-208ENST00000546534 ADAP1O75689 374 aa8.71□□□□□ -1.02
SCAF11-208ENST00000546534 GAGE7O76087 117 aa8.71□□□□□ -1.02
SCAF11-208ENST00000546534 GAGE12FP0CL80 117 aa8.71□□□□□ -1.02
SCAF11-208ENST00000546534 GAGE12GP0CL81 117 aa8.71□□□□□ -1.02
SCAF11-208ENST00000546534 GAGE12IP0CL82 117 aa8.71□□□□□ -1.02
SCAF11-208ENST00000546534 PRB4P10163 310 aaPredicted RBP8.71□□□□□ -1.02
SCAF11-208ENST00000546534 HIST1H1AQ02539 215 aaPredicted RBP8.71□□□□□ -1.02
SCAF11-208ENST00000546534 FGL1Q08830 312 aa8.71□□□□□ -1.02
SCAF11-208ENST00000546534 Q6ZSN1 163 aa8.71□□□□□ -1.02
SCAF11-208ENST00000546534 OR8A1Q8NGG7 326 aa8.71□□□□□ -1.02
SCAF11-208ENST00000546534 OR4D5Q8NGN0 318 aa8.71□□□□□ -1.02
SCAF11-208ENST00000546534 OR1B1Q8NGR6 318 aa8.71□□□□□ -1.02
SCAF11-208ENST00000546534 PPP1R14DQ9NXH3 145 aa8.71□□□□□ -1.02
SCAF11-208ENST00000546534 MTFP1Q9UDX5 166 aa8.71□□□□□ -1.02
SCAF11-208ENST00000546534 SLC45A2Q9UMX9 530 aa8.71□□□□□ -1.02
SCAF11-208ENST00000546534 C14orf166Q9Y224 244 aaKnown RBP8.71□□□□□ -1.02
SCAF11-208ENST00000546534 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.71□□□□□ -1.02
SCAF11-208ENST00000546534 TMEM56-RWDD3S4R434 201 aa8.71□□□□□ -1.02
SCAF11-208ENST00000546534 A0A087WTM6 91 aa8.7□□□□□ -1.02
SCAF11-208ENST00000546534 A0A096LPF7 62 aa8.7□□□□□ -1.02
SCAF11-208ENST00000546534 CRYM-AS1A6NIL9 109 aa8.7□□□□□ -1.02
SCAF11-208ENST00000546534 SIVA1O15304 175 aa8.7□□□□□ -1.02
SCAF11-208ENST00000546534 RAB3DO95716 219 aa8.7□□□□□ -1.02
SCAF11-208ENST00000546534 ATP5IP56385 69 aaPredicted RBP8.7□□□□□ -1.02
SCAF11-208ENST00000546534 GGNBP1Q5YKI7 109 aa8.7□□□□□ -1.02
SCAF11-208ENST00000546534 THAP8Q8NA92 274 aa8.7□□□□□ -1.02
SCAF11-208ENST00000546534 GPR82Q96P67 336 aa8.7□□□□□ -1.02
SCAF11-208ENST00000546534 CFDP00746 253 aaPredicted RBP8.69□□□□□ -1.02
SCAF11-208ENST00000546534 ORM2P19652 201 aa8.69□□□□□ -1.02
SCAF11-208ENST00000546534 GATA2P23769 480 aaPredicted RBP8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms