RNA–Protein interactions for RNA: ENST00000546386.1

CCDC38-202, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-202ENST00000546386 Q9H3A6 140 aa9.3□□□□□ -0.92
CCDC38-202ENST00000546386 ELOA3CA0A087WX78 387 aaPredicted RBP9.3□□□□□ -0.92
CCDC38-202ENST00000546386 A0A096LNT2 108 aa9.3□□□□□ -0.92
CCDC38-202ENST00000546386 ZNF320A2RRD8 509 aa9.3□□□□□ -0.92
CCDC38-202ENST00000546386 GP9P14770 177 aa9.3□□□□□ -0.92
CCDC38-202ENST00000546386 SRD5A1P18405 259 aa9.3□□□□□ -0.92
CCDC38-202ENST00000546386 ATP5IP56385 69 aaPredicted RBP9.3□□□□□ -0.92
CCDC38-202ENST00000546386 TPPP2P59282 170 aa9.3□□□□□ -0.92
CCDC38-202ENST00000546386 GOLT1AQ6ZVE7 132 aa9.3□□□□□ -0.92
CCDC38-202ENST00000546386 TCF24Q7RTU0 167 aa9.3□□□□□ -0.92
CCDC38-202ENST00000546386 RNF182Q8N6D2 247 aa9.3□□□□□ -0.92
CCDC38-202ENST00000546386 C11orf44Q8N8P7 122 aa9.3□□□□□ -0.92
CCDC38-202ENST00000546386 LINC01356Q8N9X3 169 aa9.3□□□□□ -0.92
CCDC38-202ENST00000546386 TRAV41A0A0B4J266 112 aa9.29□□□□□ -0.92
CCDC38-202ENST00000546386 ZNF98A6NK75 572 aa9.29□□□□□ -0.92
CCDC38-202ENST00000546386 FABP9Q0Z7S8 132 aa9.29□□□□□ -0.92
CCDC38-202ENST00000546386 PNRC1Q12796 327 aaPredicted RBP9.29□□□□□ -0.92
CCDC38-202ENST00000546386 LINC00322Q6ZN03 302 aaPredicted RBP9.29□□□□□ -0.92
CCDC38-202ENST00000546386 MUC21A0A0G2JKD1 596 aa9.29□□□□□ -0.92
CCDC38-202ENST00000546386 MUC21A0A140T8X8 626 aa9.29□□□□□ -0.92
CCDC38-202ENST00000546386 A6NJY4 79 aa9.29□□□□□ -0.92
CCDC38-202ENST00000546386 NPIPB5A8MRT5 1133 aa9.29□□□□□ -0.92
CCDC38-202ENST00000546386 ZNF705DP0CH99 300 aaPredicted RBP9.29□□□□□ -0.92
CCDC38-202ENST00000546386 ZNF705BP0CI00 300 aaPredicted RBP9.29□□□□□ -0.92
CCDC38-202ENST00000546386 MUC21Q5SSG8 566 aa9.29□□□□□ -0.92
CCDC38-202ENST00000546386 TEX38Q6PEX7 206 aa9.29□□□□□ -0.92
CCDC38-202ENST00000546386 OR8I2Q8N0Y5 310 aa9.29□□□□□ -0.92
CCDC38-202ENST00000546386 MOB4Q9Y3A3 225 aa9.29□□□□□ -0.92
CCDC38-202ENST00000546386 OOSP1A8MZH6 123 aa9.28□□□□□ -0.92
CCDC38-202ENST00000546386 J3QKU1 62 aa9.28□□□□□ -0.92
CCDC38-202ENST00000546386 IGHV4-31P0DP07 118 aa9.28□□□□□ -0.92
CCDC38-202ENST00000546386 GZMBP10144 247 aa9.28□□□□□ -0.92
CCDC38-202ENST00000546386 SRSF2Q01130 221 aaKnown RBP9.28□□□□□ -0.92
CCDC38-202ENST00000546386 PVRIGQ6DKI7 326 aa9.28□□□□□ -0.92
CCDC38-202ENST00000546386 UNQ9165/PRO28630Q6UXU0 137 aa9.28□□□□□ -0.92
CCDC38-202ENST00000546386 PRNTQ86SH4 94 aa9.28□□□□□ -0.92
CCDC38-202ENST00000546386 BAGE2Q86Y30 109 aa9.28□□□□□ -0.92
CCDC38-202ENST00000546386 PEX7O00628 323 aa9.28□□□□□ -0.92
CCDC38-202ENST00000546386 PFN1P07737 140 aaKnown RBP9.28□□□□□ -0.92
CCDC38-202ENST00000546386 RAB5BP61020 215 aa9.28□□□□□ -0.92
CCDC38-202ENST00000546386 TOMM20LQ6UXN7 152 aa9.28□□□□□ -0.92
CCDC38-202ENST00000546386 ZNF48Q96MX3 618 aaPredicted RBP9.28□□□□□ -0.92
CCDC38-202ENST00000546386 MRPL27Q9P0M9 148 aaKnown RBP9.28□□□□□ -0.92
CCDC38-202ENST00000546386 A0A087WWC5 75 aa9.27□□□□□ -0.92
CCDC38-202ENST00000546386 HOXA3O43365 443 aaPredicted RBP9.27□□□□□ -0.92
CCDC38-202ENST00000546386 HIST1H2BKO60814 126 aa9.27□□□□□ -0.92
CCDC38-202ENST00000546386 HIST1H2BJP06899 126 aa9.27□□□□□ -0.92
CCDC38-202ENST00000546386 TRGC1P0CF51 173 aa9.27□□□□□ -0.92
CCDC38-202ENST00000546386 HIST1H2BOP23527 126 aa9.27□□□□□ -0.92
CCDC38-202ENST00000546386 HIST1H2BBP33778 126 aa9.27□□□□□ -0.92
CCDC38-202ENST00000546386 HIST1H2BDP58876 126 aa9.27□□□□□ -0.92
CCDC38-202ENST00000546386 HIST1H2BCP62807 126 aa9.27□□□□□ -0.92
CCDC38-202ENST00000546386 HIST2H2BEQ16778 126 aa9.27□□□□□ -0.92
CCDC38-202ENST00000546386 KIAA1644Q3SXP7 199 aa9.27□□□□□ -0.92
CCDC38-202ENST00000546386 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.27□□□□□ -0.92
CCDC38-202ENST00000546386 HIST1H2BHQ93079 126 aa9.27□□□□□ -0.92
CCDC38-202ENST00000546386 HIST1H2BNQ99877 126 aa9.27□□□□□ -0.92
CCDC38-202ENST00000546386 HIST1H2BMQ99879 126 aa9.27□□□□□ -0.92
CCDC38-202ENST00000546386 MRPL32Q9BYC8 188 aaKnown RBP9.27□□□□□ -0.92
CCDC38-202ENST00000546386 THYN1Q9P016 225 aa9.27□□□□□ -0.92
CCDC38-202ENST00000546386 IGLV2-8P01709 118 aa9.27□□□□□ -0.93
CCDC38-202ENST00000546386 CBLN1P23435 193 aa9.27□□□□□ -0.93
CCDC38-202ENST00000546386 PMS2P11Q13670 270 aa9.27□□□□□ -0.93
CCDC38-202ENST00000546386 MRPL54Q6P161 138 aaKnown RBP9.27□□□□□ -0.93
CCDC38-202ENST00000546386 OR10G8Q8NGN5 311 aa9.27□□□□□ -0.93
CCDC38-202ENST00000546386 Q8TAT8 98 aa9.27□□□□□ -0.93
CCDC38-202ENST00000546386 ATRQ13535 2644 aa9.27□□□□□ -0.93
CCDC38-202ENST00000546386 IGKV2-40A0A087WW87 121 aaPredicted RBP9.26□□□□□ -0.93
CCDC38-202ENST00000546386 J3KRW8 73 aa9.26□□□□□ -0.93
CCDC38-202ENST00000546386 IGKV2D-40P01614 121 aaPredicted RBP9.26□□□□□ -0.93
CCDC38-202ENST00000546386 UBE2G1P62253 170 aa9.26□□□□□ -0.93
CCDC38-202ENST00000546386 RPL11P62913 178 aaKnown RBP9.26□□□□□ -0.93
CCDC38-202ENST00000546386 RPL19P84098 196 aaKnown RBP9.26□□□□□ -0.93
CCDC38-202ENST00000546386 KRTAP1-3Q8IUG1 177 aa9.26□□□□□ -0.93
CCDC38-202ENST00000546386 DUX3Q96PT4 197 aa9.26□□□□□ -0.93
CCDC38-202ENST00000546386 TUBA4BQ9H853 241 aa9.26□□□□□ -0.93
CCDC38-202ENST00000546386 EPDR1Q9UM22 224 aa9.26□□□□□ -0.93
CCDC38-202ENST00000546386 POLR3KQ9Y2Y1 108 aaPredicted RBP9.26□□□□□ -0.93
CCDC38-202ENST00000546386 ANK3Q12955 4377 aaKnown RBP9.26□□□□□ -0.93
CCDC38-202ENST00000546386 TMSB15BA0A087X1C1 80 aa9.26□□□□□ -0.93
CCDC38-202ENST00000546386 A0A1W2PRE2 83 aa9.26□□□□□ -0.93
CCDC38-202ENST00000546386 GRIFINA4D1Z8 144 aa9.26□□□□□ -0.93
CCDC38-202ENST00000546386 GGCTO75223 188 aaKnown RBP9.26□□□□□ -0.93
CCDC38-202ENST00000546386 TOMM40O96008 361 aa9.26□□□□□ -0.93
CCDC38-202ENST00000546386 RAB4BP61018 213 aa9.26□□□□□ -0.93
CCDC38-202ENST00000546386 ZNF705GA8MUZ8 300 aaPredicted RBP9.25□□□□□ -0.93
CCDC38-202ENST00000546386 B4DEV8 164 aa9.25□□□□□ -0.93
CCDC38-202ENST00000546386 SLC25A16P16260 332 aa9.25□□□□□ -0.93
CCDC38-202ENST00000546386 HIST1H1BP16401 226 aaKnown RBP9.25□□□□□ -0.93
CCDC38-202ENST00000546386 FAM110DQ8TAY7 271 aaPredicted RBP9.25□□□□□ -0.93
CCDC38-202ENST00000546386 ZNF502Q8TBZ5 544 aa9.25□□□□□ -0.93
CCDC38-202ENST00000546386 WFDC12Q8WWY7 111 aa9.25□□□□□ -0.93
CCDC38-202ENST00000546386 ZNF414Q96IQ9 312 aa9.25□□□□□ -0.93
CCDC38-202ENST00000546386 PSMG3-AS1Q96PY0 264 aa9.25□□□□□ -0.93
CCDC38-202ENST00000546386 SHANK2-AS3Q9BTD1 123 aa9.25□□□□□ -0.93
CCDC38-202ENST00000546386 C19orf24Q9BVV8 132 aa9.25□□□□□ -0.93
CCDC38-202ENST00000546386 TPPP3Q9BW30 176 aa9.25□□□□□ -0.93
CCDC38-202ENST00000546386 TRRAPQ9Y4A5 3859 aa9.25□□□□□ -0.93
CCDC38-202ENST00000546386 NBEAL2Q6ZNJ1 2754 aa9.25□□□□□ -0.93
CCDC38-202ENST00000546386 S100PP25815 95 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms