RNA–Protein interactions for RNA: ENST00000545432.5

RTN3-214, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-214ENST00000545432 SLC35E1Q96K37 410 aa10.07□□□□□ -0.8
RTN3-214ENST00000545432 Q9H521 79 aa10.07□□□□□ -0.8
RTN3-214ENST00000545432 COMMD3Q9UBI1 195 aa10.07□□□□□ -0.8
RTN3-214ENST00000545432 GPR132Q9UNW8 380 aa10.07□□□□□ -0.8
RTN3-214ENST00000545432 DNAH8Q96JB1 4490 aa10.06□□□□□ -0.8
RTN3-214ENST00000545432 EREGO14944 169 aa10.06□□□□□ -0.8
RTN3-214ENST00000545432 SULT1A3P0DMM9 295 aa10.06□□□□□ -0.8
RTN3-214ENST00000545432 SULT1A4P0DMN0 295 aa10.06□□□□□ -0.8
RTN3-214ENST00000545432 ERVFC1-1P60608 527 aa10.06□□□□□ -0.8
RTN3-214ENST00000545432 ICAM4Q14773 271 aa10.06□□□□□ -0.8
RTN3-214ENST00000545432 TMEM268Q5VZI3 342 aa10.06□□□□□ -0.8
RTN3-214ENST00000545432 TMEM229BQ8NBD8 167 aa10.06□□□□□ -0.8
RTN3-214ENST00000545432 OR52I2Q8NH67 350 aa10.06□□□□□ -0.8
RTN3-214ENST00000545432 YIPF6Q96EC8 236 aa10.06□□□□□ -0.8
RTN3-214ENST00000545432 SLC25A39Q9BZJ4 359 aaPredicted RBP10.06□□□□□ -0.8
RTN3-214ENST00000545432 A0A087WTM6 91 aa10.05□□□□□ -0.8
RTN3-214ENST00000545432 A0A096LPF7 62 aa10.05□□□□□ -0.8
RTN3-214ENST00000545432 A0A0J9YY99 117 aa10.05□□□□□ -0.8
RTN3-214ENST00000545432 CRYM-AS1A6NIL9 109 aa10.05□□□□□ -0.8
RTN3-214ENST00000545432 FAM229AH3BQW9 127 aa10.05□□□□□ -0.8
RTN3-214ENST00000545432 GABARAPH6UMI1 98 aa10.05□□□□□ -0.8
RTN3-214ENST00000545432 ADAP1O75689 374 aa10.05□□□□□ -0.8
RTN3-214ENST00000545432 GABARAPO95166 117 aa10.05□□□□□ -0.8
RTN3-214ENST00000545432 SMR3BP02814 79 aaPredicted RBP10.05□□□□□ -0.8
RTN3-214ENST00000545432 CCR6P51684 374 aa10.05□□□□□ -0.8
RTN3-214ENST00000545432 OR2F1Q13607 317 aa10.05□□□□□ -0.8
RTN3-214ENST00000545432 RNASE12Q5GAN4 147 aaKnown RBP10.05□□□□□ -0.8
RTN3-214ENST00000545432 OR8A1Q8NGG7 326 aa10.05□□□□□ -0.8
RTN3-214ENST00000545432 PPP1R14BQ96C90 147 aa10.05□□□□□ -0.8
RTN3-214ENST00000545432 VSIG2Q96IQ7 327 aa10.05□□□□□ -0.8
RTN3-214ENST00000545432 C20orf144Q9BQM9 153 aa10.05□□□□□ -0.8
RTN3-214ENST00000545432 RBKSQ9H477 322 aa10.05□□□□□ -0.8
RTN3-214ENST00000545432 KRTAP29-1A8MX34 341 aaPredicted RBP10.04□□□□□ -0.8
RTN3-214ENST00000545432 H7BYZ3 331 aa10.04□□□□□ -0.8
RTN3-214ENST00000545432 SIVA1O15304 175 aa10.04□□□□□ -0.8
RTN3-214ENST00000545432 NEDD8Q15843 81 aa10.04□□□□□ -0.8
RTN3-214ENST00000545432 GPR107Q5VW38 600 aa10.04□□□□□ -0.8
RTN3-214ENST00000545432 IGFL4Q6B9Z1 124 aa10.04□□□□□ -0.8
RTN3-214ENST00000545432 RNF182Q8N6D2 247 aa10.04□□□□□ -0.8
RTN3-214ENST00000545432 PRSS46E5RG02 174 aa10.03□□□□□ -0.8
RTN3-214ENST00000545432 HPGDSO60760 199 aa10.03□□□□□ -0.8
RTN3-214ENST00000545432 RAB3DO95716 219 aa10.03□□□□□ -0.8
RTN3-214ENST00000545432 IFNA5P01569 189 aa10.03□□□□□ -0.8
RTN3-214ENST00000545432 ZNF182P17025 639 aaPredicted RBP10.03□□□□□ -0.8
RTN3-214ENST00000545432 CXCL3P19876 107 aa10.03□□□□□ -0.8
RTN3-214ENST00000545432 CDKN1BP46527 198 aa10.03□□□□□ -0.8
RTN3-214ENST00000545432 SCGB2B2Q4G0G5 96 aa10.03□□□□□ -0.8
RTN3-214ENST00000545432 TMEM182Q6ZP80 229 aaPredicted RBP10.03□□□□□ -0.8
RTN3-214ENST00000545432 Q6ZSN1 163 aa10.03□□□□□ -0.8
RTN3-214ENST00000545432 NFE4Q86UQ8 179 aa10.03□□□□□ -0.8
RTN3-214ENST00000545432 SLC25A22Q9H936 323 aa10.03□□□□□ -0.8
RTN3-214ENST00000545432 C14orf166Q9Y224 244 aaKnown RBP10.03□□□□□ -0.8
RTN3-214ENST00000545432 A0A0B4J2A0 478 aa10.02□□□□□ -0.81
RTN3-214ENST00000545432 J3QL48 77 aa10.02□□□□□ -0.81
RTN3-214ENST00000545432 PITX3O75364 302 aa10.02□□□□□ -0.81
RTN3-214ENST00000545432 TNFAIP8O95379 198 aa10.02□□□□□ -0.81
RTN3-214ENST00000545432 TAS2R19P59542 299 aa10.02□□□□□ -0.81
RTN3-214ENST00000545432 LSM3P62310 102 aaKnown RBP10.02□□□□□ -0.81
RTN3-214ENST00000545432 DAZ2Q13117 558 aaKnown RBP10.02□□□□□ -0.81
RTN3-214ENST00000545432 SMCO1Q147U7 214 aa10.02□□□□□ -0.81
RTN3-214ENST00000545432 PSG3Q16557 428 aa10.02□□□□□ -0.81
RTN3-214ENST00000545432 STEAP1BQ6NZ63 245 aa10.02□□□□□ -0.81
RTN3-214ENST00000545432 SHPKQ9UHJ6 478 aa10.02□□□□□ -0.81
RTN3-214ENST00000545432 TNFRSF18Q9Y5U5 241 aa10.02□□□□□ -0.81
RTN3-214ENST00000545432 HTN1P15515 57 aa10.01□□□□□ -0.81
RTN3-214ENST00000545432 GCSHP23434 173 aa10.01□□□□□ -0.81
RTN3-214ENST00000545432 HIST1H1AQ02539 215 aaPredicted RBP10.01□□□□□ -0.81
RTN3-214ENST00000545432 C4orf46Q504U0 113 aa10.01□□□□□ -0.81
RTN3-214ENST00000545432 ZNF738Q8NE65 137 aa10.01□□□□□ -0.81
RTN3-214ENST00000545432 A0A087X0K7 114 aa10□□□□□ -0.81
RTN3-214ENST00000545432 GAGE12BA1L429 117 aa10□□□□□ -0.81
RTN3-214ENST00000545432 H3BRN7 92 aa10□□□□□ -0.81
RTN3-214ENST00000545432 GAGE7O76087 117 aa10□□□□□ -0.81
RTN3-214ENST00000545432 GAGE12FP0CL80 117 aa10□□□□□ -0.81
RTN3-214ENST00000545432 GAGE12GP0CL81 117 aa10□□□□□ -0.81
RTN3-214ENST00000545432 GAGE12IP0CL82 117 aa10□□□□□ -0.81
RTN3-214ENST00000545432 DNAH10OSP0CZ25 163 aa10□□□□□ -0.81
RTN3-214ENST00000545432 S100A7P31151 101 aa10□□□□□ -0.81
RTN3-214ENST00000545432 RHOBP62745 196 aa10□□□□□ -0.81
RTN3-214ENST00000545432 SSBP1Q04837 148 aaKnown RBP10□□□□□ -0.81
RTN3-214ENST00000545432 OR1S1Q8NH92 325 aa10□□□□□ -0.81
RTN3-214ENST00000545432 C15orf40Q8WUR7 153 aa10□□□□□ -0.81
RTN3-214ENST00000545432 SHANK2-AS3Q9BTD1 123 aa10□□□□□ -0.81
RTN3-214ENST00000545432 TMEM70Q9BUB7 260 aa10□□□□□ -0.81
RTN3-214ENST00000545432 ATP6V1G2O95670 118 aa9.99□□□□□ -0.81
RTN3-214ENST00000545432 RLN2P04090 185 aa9.99□□□□□ -0.81
RTN3-214ENST00000545432 RPL7P18124 248 aaKnown RBP9.99□□□□□ -0.81
RTN3-214ENST00000545432 GATA2P23769 480 aaPredicted RBP9.99□□□□□ -0.81
RTN3-214ENST00000545432 PLP1P60201 277 aa9.99□□□□□ -0.81
RTN3-214ENST00000545432 RAB11AP62491 216 aa9.99□□□□□ -0.81
RTN3-214ENST00000545432 KIR3DS1Q14943 382 aa9.99□□□□□ -0.81
RTN3-214ENST00000545432 LYZL2Q7Z4W2 148 aa9.99□□□□□ -0.81
RTN3-214ENST00000545432 BPIFCQ8NFQ6 507 aa9.99□□□□□ -0.81
RTN3-214ENST00000545432 TMEM147Q9BVK8 224 aa9.99□□□□□ -0.81
RTN3-214ENST00000545432 KCNIP3Q9Y2W7 256 aa9.99□□□□□ -0.81
RTN3-214ENST00000545432 K7EP13 123 aa9.98□□□□□ -0.81
RTN3-214ENST00000545432 MRPS12O15235 138 aaKnown RBP9.98□□□□□ -0.81
RTN3-214ENST00000545432 ORM2P19652 201 aa9.98□□□□□ -0.81
RTN3-214ENST00000545432 SERTAD4-AS1Q5TG53 156 aa9.98□□□□□ -0.81
RTN3-214ENST00000545432 TMED4Q7Z7H5 227 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 105.5 ms