RNA–Protein interactions for RNA: ENST00000545358.5

NPIPB3-214, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 5

Gene NPIPB3, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-214ENST00000545358 C5orf17Q8NAS9 161 aa4.24□□□□□ -1.73
NPIPB3-214ENST00000545358 SMIM12Q96EX1 92 aa4.24□□□□□ -1.73
NPIPB3-214ENST00000545358 BTF3L4Q96K17 158 aa4.24□□□□□ -1.73
NPIPB3-214ENST00000545358 IGF2BP2-AS1Q96M15 143 aa4.24□□□□□ -1.73
NPIPB3-214ENST00000545358 GPR82Q96P67 336 aa4.24□□□□□ -1.73
NPIPB3-214ENST00000545358 OR5B12Q96R08 314 aa4.24□□□□□ -1.73
NPIPB3-214ENST00000545358 ATG101Q9BSB4 218 aa4.24□□□□□ -1.73
NPIPB3-214ENST00000545358 ELOVL1Q9BW60 279 aa4.24□□□□□ -1.73
NPIPB3-214ENST00000545358 Q9H3A6 140 aa4.24□□□□□ -1.73
NPIPB3-214ENST00000545358 OTORQ9NRC9 128 aa4.24□□□□□ -1.73
NPIPB3-214ENST00000545358 RABAC1Q9UI14 185 aa4.24□□□□□ -1.73
NPIPB3-214ENST00000545358 SOX21Q9Y651 276 aaPredicted RBP4.24□□□□□ -1.73
NPIPB3-214ENST00000545358 S4R3C0 116 aa4.24□□□□□ -1.73
NPIPB3-214ENST00000545358 SPTAN1Q13813 2472 aaKnown RBP4.24□□□□□ -1.73
NPIPB3-214ENST00000545358 VPS13CQ709C8 3753 aa4.24□□□□□ -1.73
NPIPB3-214ENST00000545358 MED13LQ71F56 2210 aa4.23□□□□□ -1.73
NPIPB3-214ENST00000545358 FBN2P35556 2912 aa4.23□□□□□ -1.73
NPIPB3-214ENST00000545358 TRBV19A0A075B6N1 114 aa4.23□□□□□ -1.73
NPIPB3-214ENST00000545358 TRBV24-1A0A075B6N3 115 aa4.23□□□□□ -1.73
NPIPB3-214ENST00000545358 A0A087X0K7 114 aa4.23□□□□□ -1.73
NPIPB3-214ENST00000545358 A0A0G2JLM5 398 aa4.23□□□□□ -1.73
NPIPB3-214ENST00000545358 SERTM2A0A1B0GWG4 89 aa4.23□□□□□ -1.73
NPIPB3-214ENST00000545358 HELTA6NFD8 242 aa4.23□□□□□ -1.73
NPIPB3-214ENST00000545358 C1orf196B1AJZ1 125 aa4.23□□□□□ -1.73
NPIPB3-214ENST00000545358 MRPS12O15235 138 aaKnown RBP4.23□□□□□ -1.73
NPIPB3-214ENST00000545358 ZNF253O75346 499 aa4.23□□□□□ -1.73
NPIPB3-214ENST00000545358 IGHV3-23P01764 117 aa4.23□□□□□ -1.73
NPIPB3-214ENST00000545358 SLC25A5P05141 298 aaKnown RBP4.23□□□□□ -1.73
NPIPB3-214ENST00000545358 RAB5AP20339 215 aa4.23□□□□□ -1.73
NPIPB3-214ENST00000545358 SRP14P37108 136 aaKnown RBP4.23□□□□□ -1.73
NPIPB3-214ENST00000545358 TPPP2P59282 170 aa4.23□□□□□ -1.73
NPIPB3-214ENST00000545358 RAB5BP61020 215 aa4.23□□□□□ -1.73
NPIPB3-214ENST00000545358 FLI1Q01543 452 aaPredicted RBP4.23□□□□□ -1.73
NPIPB3-214ENST00000545358 ELOBQ15370 118 aa4.23□□□□□ -1.73
NPIPB3-214ENST00000545358 LEMD1Q68G75 181 aa4.23□□□□□ -1.73
NPIPB3-214ENST00000545358 TEX38Q6PEX7 206 aa4.23□□□□□ -1.73
NPIPB3-214ENST00000545358 KCNIP4Q6PIL6 250 aa4.23□□□□□ -1.73
NPIPB3-214ENST00000545358 C1QL4Q86Z23 238 aa4.23□□□□□ -1.73
NPIPB3-214ENST00000545358 FAM24BQ8N5W8 94 aa4.23□□□□□ -1.73
NPIPB3-214ENST00000545358 TMEM86BQ8N661 226 aa4.23□□□□□ -1.73
NPIPB3-214ENST00000545358 ARL6IP6Q8N6S5 226 aa4.23□□□□□ -1.73
NPIPB3-214ENST00000545358 WFDC11Q8NEX6 87 aa4.23□□□□□ -1.73
NPIPB3-214ENST00000545358 BLNKQ8WV28 456 aa4.23□□□□□ -1.73
NPIPB3-214ENST00000545358 SFRP2Q96HF1 295 aa4.23□□□□□ -1.73
NPIPB3-214ENST00000545358 FMC1Q96HJ9 113 aa4.23□□□□□ -1.73
NPIPB3-214ENST00000545358 IMMP2LQ96T52 175 aa4.23□□□□□ -1.73
NPIPB3-214ENST00000545358 CHRDL1Q9BU40 450 aa4.23□□□□□ -1.73
NPIPB3-214ENST00000545358 NPFFR1Q9GZQ6 430 aa4.23□□□□□ -1.73
NPIPB3-214ENST00000545358 ZNF586Q9NXT0 402 aa4.23□□□□□ -1.73
NPIPB3-214ENST00000545358 EPDR1Q9UM22 224 aa4.23□□□□□ -1.73
NPIPB3-214ENST00000545358 LRRK2Q5S007 2527 aa4.23□□□□□ -1.73
NPIPB3-214ENST00000545358 FLNCQ14315 2725 aa4.23□□□□□ -1.73
NPIPB3-214ENST00000545358 NBPF19A0A087WUL8 3843 aa4.22□□□□□ -1.73
NPIPB3-214ENST00000545358 TRAV9-1A0A075B6T8 112 aa4.22□□□□□ -1.73
NPIPB3-214ENST00000545358 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.22□□□□□ -1.73
NPIPB3-214ENST00000545358 TRBV6-1A0A0K0K1D8 114 aa4.22□□□□□ -1.73
NPIPB3-214ENST00000545358 PGPA6NDG6 321 aa4.22□□□□□ -1.73
NPIPB3-214ENST00000545358 K7EN84 100 aa4.22□□□□□ -1.73
NPIPB3-214ENST00000545358 NDUFA4O00483 81 aa4.22□□□□□ -1.73
NPIPB3-214ENST00000545358 CD5LO43866 347 aa4.22□□□□□ -1.73
NPIPB3-214ENST00000545358 GCGP01275 180 aa4.22□□□□□ -1.73
NPIPB3-214ENST00000545358 IGHG4P01861 327 aa4.22□□□□□ -1.73
NPIPB3-214ENST00000545358 CLEC3BP05452 202 aa4.22□□□□□ -1.73
NPIPB3-214ENST00000545358 CRYBA1P05813 215 aa4.22□□□□□ -1.73
NPIPB3-214ENST00000545358 HNF1AP20823 631 aa4.22□□□□□ -1.73
NPIPB3-214ENST00000545358 ARL3P36405 182 aa4.22□□□□□ -1.73
NPIPB3-214ENST00000545358 GALR1P47211 349 aa4.22□□□□□ -1.73
NPIPB3-214ENST00000545358 MEOX2P50222 304 aa4.22□□□□□ -1.73
NPIPB3-214ENST00000545358 UBE2G1P62253 170 aa4.22□□□□□ -1.73
NPIPB3-214ENST00000545358 RANP62826 216 aaKnown RBP4.22□□□□□ -1.73
NPIPB3-214ENST00000545358 BLCAPP62952 87 aa4.22□□□□□ -1.73
NPIPB3-214ENST00000545358 SCGB2A2Q13296 93 aa4.22□□□□□ -1.73
NPIPB3-214ENST00000545358 TMEM183BQ1AE95 376 aa4.22□□□□□ -1.73
NPIPB3-214ENST00000545358 C1orf194Q5T5A4 169 aa4.22□□□□□ -1.73
NPIPB3-214ENST00000545358 HIST2H2BCQ6DN03 193 aa4.22□□□□□ -1.73
NPIPB3-214ENST00000545358 TOMM20LQ6UXN7 152 aa4.22□□□□□ -1.73
NPIPB3-214ENST00000545358 CLEC19AQ6UXS0 136 aa4.22□□□□□ -1.73
NPIPB3-214ENST00000545358 SIGLEC15Q6ZMC9 328 aa4.22□□□□□ -1.73
NPIPB3-214ENST00000545358 TMEM75Q8N9X5 138 aa4.22□□□□□ -1.73
NPIPB3-214ENST00000545358 OR10G8Q8NGN5 311 aa4.22□□□□□ -1.73
NPIPB3-214ENST00000545358 CMTM2Q8TAZ6 248 aa4.22□□□□□ -1.73
NPIPB3-214ENST00000545358 ZNF414Q96IQ9 312 aa4.22□□□□□ -1.73
NPIPB3-214ENST00000545358 MS4A10Q96PG2 267 aa4.22□□□□□ -1.73
NPIPB3-214ENST00000545358 METTL26Q96S19 204 aa4.22□□□□□ -1.73
NPIPB3-214ENST00000545358 PYGO2Q9BRQ0 406 aa4.22□□□□□ -1.73
NPIPB3-214ENST00000545358 PRSS22Q9GZN4 317 aa4.22□□□□□ -1.73
NPIPB3-214ENST00000545358 GNB4Q9HAV0 340 aa4.22□□□□□ -1.73
NPIPB3-214ENST00000545358 BIN3Q9NQY0 253 aa4.22□□□□□ -1.73
NPIPB3-214ENST00000545358 OSTCQ9NRP0 149 aa4.22□□□□□ -1.73
NPIPB3-214ENST00000545358 MLXQ9UH92 298 aa4.22□□□□□ -1.73
NPIPB3-214ENST00000545358 KLF12Q9Y4X4 402 aa4.22□□□□□ -1.73
NPIPB3-214ENST00000545358 URGCP-MRPS24S4R325 110 aa4.22□□□□□ -1.73
NPIPB3-214ENST00000545358 ANKRD17O75179 2603 aaKnown RBP4.22□□□□□ -1.73
NPIPB3-214ENST00000545358 DOPEY2Q9Y3R5 2298 aa4.21□□□□□ -1.73
NPIPB3-214ENST00000545358 SPG11Q96JI7 2443 aa4.21□□□□□ -1.74
NPIPB3-214ENST00000545358 CLPSL1A2RUU4 121 aa4.21□□□□□ -1.74
NPIPB3-214ENST00000545358 PGPEP1LA6NFU8 196 aa4.21□□□□□ -1.74
NPIPB3-214ENST00000545358 FBLL1A6NHQ2 334 aaKnown RBP4.21□□□□□ -1.74
NPIPB3-214ENST00000545358 K7EQM0 130 aa4.21□□□□□ -1.74
NPIPB3-214ENST00000545358 ISLRO14498 428 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 93.3 ms