RNA–Protein interactions for RNA: ENST00000545308.5

SNHG1-222, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 646 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-222ENST00000545308 PIAS1O75925 651 aa2.23□□□□□ -2.05
SNHG1-222ENST00000545308 CPSF4O95639 269 aaKnown RBP2.23□□□□□ -2.05
SNHG1-222ENST00000545308 LY6G6CO95867 125 aa2.23□□□□□ -2.05
SNHG1-222ENST00000545308 IGF2P01344 180 aa2.23□□□□□ -2.05
SNHG1-222ENST00000545308 TYMSP04818 313 aa2.23□□□□□ -2.05
SNHG1-222ENST00000545308 LINC00614P0C842 121 aa2.23□□□□□ -2.05
SNHG1-222ENST00000545308 LINC00032P0C843 101 aa2.23□□□□□ -2.05
SNHG1-222ENST00000545308 C8orf88P0DMB2 117 aa2.23□□□□□ -2.05
SNHG1-222ENST00000545308 CXCL3P19876 107 aa2.23□□□□□ -2.05
SNHG1-222ENST00000545308 RPS4Y1P22090 263 aaKnown RBP2.23□□□□□ -2.05
SNHG1-222ENST00000545308 S100A3P33764 101 aa2.23□□□□□ -2.05
SNHG1-222ENST00000545308 MAGEA12P43365 314 aa2.23□□□□□ -2.05
SNHG1-222ENST00000545308 DYNLT3P51808 116 aa2.23□□□□□ -2.05
SNHG1-222ENST00000545308 CAV3P56539 151 aa2.23□□□□□ -2.05
SNHG1-222ENST00000545308 EMX2Q04743 252 aa2.23□□□□□ -2.05
SNHG1-222ENST00000545308 OR8G1Q15617 311 aa2.23□□□□□ -2.05
SNHG1-222ENST00000545308 HIST3H3Q16695 136 aa2.23□□□□□ -2.05
SNHG1-222ENST00000545308 LGALSLQ3ZCW2 172 aaPredicted RBP2.23□□□□□ -2.05
SNHG1-222ENST00000545308 C10orf128Q5T292 105 aa2.23□□□□□ -2.05
SNHG1-222ENST00000545308 C8orf74Q6P047 294 aa2.23□□□□□ -2.05
SNHG1-222ENST00000545308 TNFAIP8L2Q6P589 184 aaPredicted RBP2.23□□□□□ -2.05
SNHG1-222ENST00000545308 IGFL1Q6UW32 110 aa2.23□□□□□ -2.05
SNHG1-222ENST00000545308 Q6ZRU5 148 aa2.23□□□□□ -2.05
SNHG1-222ENST00000545308 RPS27LQ71UM5 84 aaKnown RBP2.23□□□□□ -2.05
SNHG1-222ENST00000545308 PDZD9Q8IXQ8 264 aa2.23□□□□□ -2.05
SNHG1-222ENST00000545308 ZNF565Q8N9K5 539 aa2.23□□□□□ -2.05
SNHG1-222ENST00000545308 OR13D1Q8NGV5 346 aa2.23□□□□□ -2.05
SNHG1-222ENST00000545308 HAVCR2Q8TDQ0 301 aa2.23□□□□□ -2.05
SNHG1-222ENST00000545308 RNF133Q8WVZ7 376 aa2.23□□□□□ -2.05
SNHG1-222ENST00000545308 H1FXQ92522 213 aaKnown RBP2.23□□□□□ -2.05
SNHG1-222ENST00000545308 UBE2WQ96B02 151 aa2.23□□□□□ -2.05
SNHG1-222ENST00000545308 TESCQ96BS2 214 aa2.23□□□□□ -2.05
SNHG1-222ENST00000545308 GALMQ96C23 342 aa2.23□□□□□ -2.05
SNHG1-222ENST00000545308 PACRGQ96M98 296 aaPredicted RBP2.23□□□□□ -2.05
SNHG1-222ENST00000545308 RTBDNQ9BSG5 229 aaPredicted RBP2.23□□□□□ -2.05
SNHG1-222ENST00000545308 OR2H1Q9GZK4 316 aa2.23□□□□□ -2.05
SNHG1-222ENST00000545308 EIF5A2Q9GZV4 153 aaKnown RBP2.23□□□□□ -2.05
SNHG1-222ENST00000545308 SNX12Q9UMY4 172 aa2.23□□□□□ -2.05
SNHG1-222ENST00000545308 TNCP24821 2201 aa2.22□□□□□ -2.05
SNHG1-222ENST00000545308 A0A0B4J2C4 111 aa2.22□□□□□ -2.05
SNHG1-222ENST00000545308 A6NED7 52 aa2.22□□□□□ -2.05
SNHG1-222ENST00000545308 HMGN4O00479 90 aa2.22□□□□□ -2.05
SNHG1-222ENST00000545308 CXCR6O00574 342 aa2.22□□□□□ -2.05
SNHG1-222ENST00000545308 GYPAP02724 150 aa2.22□□□□□ -2.05
SNHG1-222ENST00000545308 SERPINE1P05121 402 aa2.22□□□□□ -2.05
SNHG1-222ENST00000545308 ATP5G1P05496 136 aa2.22□□□□□ -2.05
SNHG1-222ENST00000545308 INAFM2P0DMQ5 153 aa2.22□□□□□ -2.05
SNHG1-222ENST00000545308 CTLA4P16410 223 aa2.22□□□□□ -2.05
SNHG1-222ENST00000545308 ORM2P19652 201 aa2.22□□□□□ -2.05
SNHG1-222ENST00000545308 PSMB3P49720 205 aa2.22□□□□□ -2.05
SNHG1-222ENST00000545308 H2BFSP57053 126 aa2.22□□□□□ -2.05
SNHG1-222ENST00000545308 LSM6P62312 80 aaKnown RBP2.22□□□□□ -2.05
SNHG1-222ENST00000545308 TSPAN31Q12999 210 aa2.22□□□□□ -2.05
SNHG1-222ENST00000545308 KIAA2026Q5HYC2 2103 aa2.22□□□□□ -2.05
SNHG1-222ENST00000545308 MINOS1Q5TGZ0 78 aa2.22□□□□□ -2.05
SNHG1-222ENST00000545308 TEX36Q5VZQ5 186 aa2.22□□□□□ -2.05
SNHG1-222ENST00000545308 LPCAT4Q643R3 524 aa2.22□□□□□ -2.05
SNHG1-222ENST00000545308 OR2T2Q6IF00 324 aa2.22□□□□□ -2.05
SNHG1-222ENST00000545308 RASSF6Q6ZTQ3 369 aa2.22□□□□□ -2.05
SNHG1-222ENST00000545308 SBSPONQ8IVN8 264 aa2.22□□□□□ -2.05
SNHG1-222ENST00000545308 Q8N402 240 aa2.22□□□□□ -2.05
SNHG1-222ENST00000545308 OR1P1Q8NH06 330 aa2.22□□□□□ -2.05
SNHG1-222ENST00000545308 RASSF5Q8WWW0 418 aa2.22□□□□□ -2.05
SNHG1-222ENST00000545308 ITFG2Q969R8 447 aa2.22□□□□□ -2.05
SNHG1-222ENST00000545308 PAIP2Q9BPZ3 127 aaKnown RBP2.22□□□□□ -2.05
SNHG1-222ENST00000545308 TM2D3Q9BRN9 247 aa2.22□□□□□ -2.05
SNHG1-222ENST00000545308 GTSF1LQ9H1H1 148 aa2.22□□□□□ -2.05
SNHG1-222ENST00000545308 ZNF286AQ9HBT8 521 aa2.22□□□□□ -2.05
SNHG1-222ENST00000545308 LINC00527Q9UJ94 153 aa2.22□□□□□ -2.05
SNHG1-222ENST00000545308 ZNF443Q9Y2A4 671 aaPredicted RBP2.22□□□□□ -2.05
SNHG1-222ENST00000545308 KLK5Q9Y337 293 aaPredicted RBP2.22□□□□□ -2.05
SNHG1-222ENST00000545308 PHLDA3Q9Y5J5 127 aa2.22□□□□□ -2.05
SNHG1-222ENST00000545308 MINOS1-NBL1R4GNA1 71 aa2.22□□□□□ -2.05
SNHG1-222ENST00000545308 HECTD4Q9Y4D8 3996 aa2.21□□□□□ -2.06
SNHG1-222ENST00000545308 DSCAML1Q8TD84 2053 aa2.21□□□□□ -2.06
SNHG1-222ENST00000545308 DNAH1Q9P2D7 4330 aa2.21□□□□□ -2.06
SNHG1-222ENST00000545308 IGHV3OR15-7A0A075B7D8 119 aa2.21□□□□□ -2.06
SNHG1-222ENST00000545308 SPRR5A0A1B0GTR4 108 aa2.21□□□□□ -2.06
SNHG1-222ENST00000545308 A0A1B0GWA3 101 aa2.21□□□□□ -2.06
SNHG1-222ENST00000545308 GGT3PA6NGU5 568 aa2.21□□□□□ -2.06
SNHG1-222ENST00000545308 BHLHE40O14503 412 aa2.21□□□□□ -2.06
SNHG1-222ENST00000545308 CHP2O43745 196 aa2.21□□□□□ -2.06
SNHG1-222ENST00000545308 APOC1P02654 83 aa2.21□□□□□ -2.06
SNHG1-222ENST00000545308 IL6P05231 212 aa2.21□□□□□ -2.06
SNHG1-222ENST00000545308 PPIBP23284 216 aaKnown RBP2.21□□□□□ -2.06
SNHG1-222ENST00000545308 FOXA1P55317 472 aa2.21□□□□□ -2.06
SNHG1-222ENST00000545308 DAD1P61803 113 aa2.21□□□□□ -2.06
SNHG1-222ENST00000545308 BLCAPP62952 87 aa2.21□□□□□ -2.06
SNHG1-222ENST00000545308 FADDQ13158 208 aa2.21□□□□□ -2.06
SNHG1-222ENST00000545308 IL15RAQ13261 267 aa2.21□□□□□ -2.06
SNHG1-222ENST00000545308 ZNF660Q6AZW8 331 aaPredicted RBP2.21□□□□□ -2.06
SNHG1-222ENST00000545308 DCXRQ7Z4W1 244 aa2.21□□□□□ -2.06
SNHG1-222ENST00000545308 LYPD6Q86Y78 171 aa2.21□□□□□ -2.06
SNHG1-222ENST00000545308 OR5AS1Q8N127 324 aa2.21□□□□□ -2.06
SNHG1-222ENST00000545308 C3orf22Q8N5N4 141 aa2.21□□□□□ -2.06
SNHG1-222ENST00000545308 ZNF680Q8NEM1 530 aa2.21□□□□□ -2.06
SNHG1-222ENST00000545308 TLCD1Q96CP7 247 aa2.21□□□□□ -2.06
SNHG1-222ENST00000545308 OR52E6Q96RD3 313 aa2.21□□□□□ -2.06
SNHG1-222ENST00000545308 GNB1LQ9BYB4 327 aa2.21□□□□□ -2.06
SNHG1-222ENST00000545308 MAP1LC3AQ9H492 121 aa2.21□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms