RNA–Protein interactions for RNA: ENST00000544778.6

BPTF-208, Transcript of bromodomain PHD finger transcription factor, humanhuman

TSL 5

Gene BPTF, Length 7,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BPTF-208ENST00000544778 GAGE5Q13069 117 aa16.42■□□□□ 0.22
BPTF-208ENST00000544778 UNQ6494/PRO21346Q6UXR6 183 aa16.42■□□□□ 0.22
BPTF-208ENST00000544778 PSG3Q16557 428 aa16.42■□□□□ 0.22
BPTF-208ENST00000544778 BUB1B-PAK6H3BSN5 160 aa16.42■□□□□ 0.22
BPTF-208ENST00000544778 RHPN1-AS1Q9BWJ2 59 aa16.42■□□□□ 0.22
BPTF-208ENST00000544778 A0A087X0K7 114 aa16.41■□□□□ 0.22
BPTF-208ENST00000544778 FAM90A9PA6NNJ1 464 aa16.41■□□□□ 0.22
BPTF-208ENST00000544778 KNCNA6PVL3 124 aa16.41■□□□□ 0.22
BPTF-208ENST00000544778 MRPL14Q6P1L8 145 aaKnown RBP16.41■□□□□ 0.22
BPTF-208ENST00000544778 SIPA1L3O60292 1781 aaPredicted RBP16.41■□□□□ 0.22
BPTF-208ENST00000544778 A0A1B0GTI1 187 aa16.41■□□□□ 0.22
BPTF-208ENST00000544778 RUSC1-AS1Q66K80 236 aa16.41■□□□□ 0.22
BPTF-208ENST00000544778 RNF126Q9BV68 326 aa16.41■□□□□ 0.22
BPTF-208ENST00000544778 NDUFS8O00217 210 aa16.41■□□□□ 0.22
BPTF-208ENST00000544778 E9PQ18 207 aa16.41■□□□□ 0.22
BPTF-208ENST00000544778 SCN5AQ14524 2016 aa16.41■□□□□ 0.22
BPTF-208ENST00000544778 LY6HO94772 140 aa16.41■□□□□ 0.22
BPTF-208ENST00000544778 IFITM2Q01629 132 aa16.41■□□□□ 0.22
BPTF-208ENST00000544778 A0A1B0GWJ7 208 aa16.41■□□□□ 0.22
BPTF-208ENST00000544778 ZMAT4Q9H898 229 aa16.41■□□□□ 0.22
BPTF-208ENST00000544778 MBD3L4A6NDZ8 208 aaPredicted RBP16.4■□□□□ 0.22
BPTF-208ENST00000544778 MBD3L3A6NE82 208 aaPredicted RBP16.4■□□□□ 0.22
BPTF-208ENST00000544778 MBD3L5A6NJ08 208 aaPredicted RBP16.4■□□□□ 0.22
BPTF-208ENST00000544778 C9orf139Q6ZV77 190 aa16.4■□□□□ 0.22
BPTF-208ENST00000544778 MBD3L2Q8NHZ7 208 aaPredicted RBP16.4■□□□□ 0.22
BPTF-208ENST00000544778 hADV29S1A0JD25 119 aa16.4■□□□□ 0.22
BPTF-208ENST00000544778 SP5Q6BEB4 398 aaPredicted RBP16.4■□□□□ 0.22
BPTF-208ENST00000544778 NR2C2APQ86WQ0 139 aa16.4■□□□□ 0.22
BPTF-208ENST00000544778 Q96MF0 132 aa16.4■□□□□ 0.22
BPTF-208ENST00000544778 COL18A1P39060 1754 aa16.4■□□□□ 0.22
BPTF-208ENST00000544778 IGFBP3P17936 291 aaPredicted RBP16.4■□□□□ 0.22
BPTF-208ENST00000544778 SLC25A48Q6ZT89 311 aaKnown RBP16.4■□□□□ 0.22
BPTF-208ENST00000544778 MMP23AO75900 390 aa16.4■□□□□ 0.22
BPTF-208ENST00000544778 BPESC1Q9GZL8 116 aa16.39■□□□□ 0.21
BPTF-208ENST00000544778 TREML4Q6UXN2 200 aa16.39■□□□□ 0.21
BPTF-208ENST00000544778 C5orf64Q2M2E5 130 aa16.39■□□□□ 0.21
BPTF-208ENST00000544778 TRBV25-1A0A075B6N4 114 aa16.39■□□□□ 0.21
BPTF-208ENST00000544778 GBF1Q92538 1859 aa16.39■□□□□ 0.21
BPTF-208ENST00000544778 TAL2Q16559 108 aa16.39■□□□□ 0.21
BPTF-208ENST00000544778 A0A096LPF7 62 aa16.39■□□□□ 0.21
BPTF-208ENST00000544778 GTF3C1Q12789 2109 aa16.39■□□□□ 0.21
BPTF-208ENST00000544778 TRGV9Q99603 122 aa16.39■□□□□ 0.21
BPTF-208ENST00000544778 WFDC1Q9HC57 220 aa16.39■□□□□ 0.21
BPTF-208ENST00000544778 CLPSL1A2RUU4 121 aa16.38■□□□□ 0.21
BPTF-208ENST00000544778 RNF222A6NCQ9 220 aa16.38■□□□□ 0.21
BPTF-208ENST00000544778 C9JAW5 83 aa16.38■□□□□ 0.21
BPTF-208ENST00000544778 AZU1P20160 251 aa16.38■□□□□ 0.21
BPTF-208ENST00000544778 M0R1W7 72 aa16.38■□□□□ 0.21
BPTF-208ENST00000544778 SAA4P35542 130 aa16.38■□□□□ 0.21
BPTF-208ENST00000544778 CADP27708 2225 aa16.38■□□□□ 0.21
BPTF-208ENST00000544778 LIME1Q9H400 295 aa16.38■□□□□ 0.21
BPTF-208ENST00000544778 TRAV3A0A0B4J244 114 aa16.38■□□□□ 0.21
BPTF-208ENST00000544778 LY6G5BQ8NDX9 201 aa16.37■□□□□ 0.21
BPTF-208ENST00000544778 NYNRINQ9P2P1 1898 aaKnown RBP16.37■□□□□ 0.21
BPTF-208ENST00000544778 A0A0A6YYD4 124 aa16.37■□□□□ 0.21
BPTF-208ENST00000544778 IL17RELQ6ZVW7 336 aa16.37■□□□□ 0.21
BPTF-208ENST00000544778 NUP35Q8NFH5 326 aa16.37■□□□□ 0.21
BPTF-208ENST00000544778 BRCA1P38398 1863 aaKnown RBP16.37■□□□□ 0.21
BPTF-208ENST00000544778 IGHG3P01860 377 aa16.37■□□□□ 0.21
BPTF-208ENST00000544778 LINC01559Q495D7 138 aa16.37■□□□□ 0.21
BPTF-208ENST00000544778 APOC4P55056 127 aa16.37■□□□□ 0.21
BPTF-208ENST00000544778 CLPSL2Q6UWE3 100 aa16.37■□□□□ 0.21
BPTF-208ENST00000544778 KLK9Q9UKQ9 250 aa16.37■□□□□ 0.21
BPTF-208ENST00000544778 SDK2Q58EX2 2172 aa16.37■□□□□ 0.21
BPTF-208ENST00000544778 SHISA3A0PJX4 238 aa16.36■□□□□ 0.21
BPTF-208ENST00000544778 POLEQ07864 2286 aa16.36■□□□□ 0.21
BPTF-208ENST00000544778 SOCS3O14543 225 aa16.36■□□□□ 0.21
BPTF-208ENST00000544778 COL8A2P25067 703 aa16.36■□□□□ 0.21
BPTF-208ENST00000544778 LINC01619G3V211 115 aa16.36■□□□□ 0.21
BPTF-208ENST00000544778 Q0VFX4 171 aa16.36■□□□□ 0.21
BPTF-208ENST00000544778 H0YJW9 148 aa16.36■□□□□ 0.21
BPTF-208ENST00000544778 SPINK13Q1W4C9 94 aa16.36■□□□□ 0.21
BPTF-208ENST00000544778 ALPK2Q86TB3 2170 aa16.36■□□□□ 0.21
BPTF-208ENST00000544778 KLF5Q13887 457 aaPredicted RBP16.36■□□□□ 0.21
BPTF-208ENST00000544778 LTBP4Q8N2S1 1624 aa16.35■□□□□ 0.21
BPTF-208ENST00000544778 SUPT4H1P63272 117 aaKnown RBP16.35■□□□□ 0.21
BPTF-208ENST00000544778 ATRAIDQ6UW56 229 aa16.35■□□□□ 0.21
BPTF-208ENST00000544778 CD177Q8N6Q3 437 aa16.35■□□□□ 0.21
BPTF-208ENST00000544778 NACAE9PAV3 2078 aa16.35■□□□□ 0.21
BPTF-208ENST00000544778 GAGE6Q13070 117 aa16.35■□□□□ 0.21
BPTF-208ENST00000544778 TRPT1Q86TN4 253 aaKnown RBP16.35■□□□□ 0.21
BPTF-208ENST00000544778 GAGE12BA1L429 117 aa16.35■□□□□ 0.21
BPTF-208ENST00000544778 GAGE7O76087 117 aa16.35■□□□□ 0.21
BPTF-208ENST00000544778 NXPH4O95158 308 aa16.35■□□□□ 0.21
BPTF-208ENST00000544778 GAGE12FP0CL80 117 aa16.35■□□□□ 0.21
BPTF-208ENST00000544778 GAGE12GP0CL81 117 aa16.35■□□□□ 0.21
BPTF-208ENST00000544778 GAGE12IP0CL82 117 aa16.35■□□□□ 0.21
BPTF-208ENST00000544778 HEPN1Q6WQI6 88 aa16.35■□□□□ 0.21
BPTF-208ENST00000544778 RPRMLQ8N4K4 120 aa16.35■□□□□ 0.21
BPTF-208ENST00000544778 DAZ1Q9NQZ3 744 aaKnown RBP16.35■□□□□ 0.21
BPTF-208ENST00000544778 DSCR8Q96T75 97 aa16.35■□□□□ 0.21
BPTF-208ENST00000544778 TRAV12-1A0A0B4J245 112 aa16.35■□□□□ 0.21
BPTF-208ENST00000544778 TCTEX1D4Q5JR98 221 aa16.35■□□□□ 0.21
BPTF-208ENST00000544778 PAQR4Q8N4S7 273 aaPredicted RBP16.35■□□□□ 0.21
BPTF-208ENST00000544778 DEFB105AQ8NG35 78 aa16.35■□□□□ 0.21
BPTF-208ENST00000544778 OVOL3O00110 214 aa16.35■□□□□ 0.21
BPTF-208ENST00000544778 ZDBF2Q9HCK1 2354 aa16.35■□□□□ 0.21
BPTF-208ENST00000544778 IGKV1-9A0A0C4DH69 117 aa16.34■□□□□ 0.21
BPTF-208ENST00000544778 SLC25A16P16260 332 aa16.34■□□□□ 0.21
BPTF-208ENST00000544778 MCRIP2Q9BUT9 160 aaKnown RBP16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms