RNA–Protein interactions for RNA: ENST00000544344.5

CD4-212, Transcript of CD4 molecule, humanhuman

TSL 2

Gene CD4, Length 1,056 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-212ENST00000544344 ZNF503Q96F45 646 aa10.67□□□□□ -0.7
CD4-212ENST00000544344 ZNF586Q9NXT0 402 aa10.67□□□□□ -0.7
CD4-212ENST00000544344 FAM25AB3EWG3 89 aa10.66□□□□□ -0.7
CD4-212ENST00000544344 FAM25CB3EWG5 89 aa10.66□□□□□ -0.7
CD4-212ENST00000544344 FAM25GB3EWG6 89 aa10.66□□□□□ -0.7
CD4-212ENST00000544344 GABARAPH6UMI1 98 aa10.66□□□□□ -0.7
CD4-212ENST00000544344 GABARAPO95166 117 aa10.66□□□□□ -0.7
CD4-212ENST00000544344 HOXA5P20719 270 aa10.66□□□□□ -0.7
CD4-212ENST00000544344 CCR6P51684 374 aa10.66□□□□□ -0.7
CD4-212ENST00000544344 VBP1P61758 197 aa10.66□□□□□ -0.7
CD4-212ENST00000544344 TMEM182Q6ZP80 229 aaPredicted RBP10.66□□□□□ -0.7
CD4-212ENST00000544344 OR4D5Q8NGN0 318 aa10.66□□□□□ -0.7
CD4-212ENST00000544344 RNASE8Q8TDE3 154 aaKnown RBP10.66□□□□□ -0.7
CD4-212ENST00000544344 GNPNAT1Q96EK6 184 aaPredicted RBP10.66□□□□□ -0.7
CD4-212ENST00000544344 C16orf74Q96GX8 76 aa10.66□□□□□ -0.7
CD4-212ENST00000544344 LINC01587Q99440 93 aa10.66□□□□□ -0.7
CD4-212ENST00000544344 NOP10Q9NPE3 64 aaKnown RBP10.66□□□□□ -0.7
CD4-212ENST00000544344 EXTL2Q9UBQ6 330 aa10.66□□□□□ -0.7
CD4-212ENST00000544344 SLC45A2Q9UMX9 530 aa10.66□□□□□ -0.7
CD4-212ENST00000544344 MRPS16Q9Y3D3 137 aaKnown RBP10.66□□□□□ -0.7
CD4-212ENST00000544344 TIMM8BQ9Y5J9 83 aaPredicted RBP10.66□□□□□ -0.7
CD4-212ENST00000544344 ZNF701M0R085 212 aaPredicted RBP10.65□□□□□ -0.7
CD4-212ENST00000544344 LINC00315P59091 139 aa10.65□□□□□ -0.7
CD4-212ENST00000544344 OR5I1Q13606 314 aa10.65□□□□□ -0.7
CD4-212ENST00000544344 SMCO1Q147U7 214 aa10.65□□□□□ -0.7
CD4-212ENST00000544344 LYZL2Q7Z4W2 148 aa10.65□□□□□ -0.7
CD4-212ENST00000544344 TMEM256Q8N2U0 113 aa10.65□□□□□ -0.7
CD4-212ENST00000544344 OR1B1Q8NGR6 318 aa10.65□□□□□ -0.7
CD4-212ENST00000544344 A0A0J9YY99 117 aa10.64□□□□□ -0.71
CD4-212ENST00000544344 HTN1P15515 57 aa10.64□□□□□ -0.71
CD4-212ENST00000544344 M6PRP20645 277 aa10.64□□□□□ -0.71
CD4-212ENST00000544344 GATA2P23769 480 aaPredicted RBP10.64□□□□□ -0.71
CD4-212ENST00000544344 TMEM144Q7Z5S9 345 aa10.64□□□□□ -0.71
CD4-212ENST00000544344 FUNDC2Q9BWH2 189 aa10.64□□□□□ -0.71
CD4-212ENST00000544344 PGPEP1Q9NXJ5 209 aa10.64□□□□□ -0.71
CD4-212ENST00000544344 NDUFA13Q9P0J0 144 aa10.64□□□□□ -0.71
CD4-212ENST00000544344 A0A0B4J2A0 478 aa10.63□□□□□ -0.71
CD4-212ENST00000544344 PRSS46E5RG02 174 aa10.63□□□□□ -0.71
CD4-212ENST00000544344 CFDP00746 253 aaPredicted RBP10.63□□□□□ -0.71
CD4-212ENST00000544344 GGNBP1Q5YKI7 109 aa10.63□□□□□ -0.71
CD4-212ENST00000544344 ZNF493Q6ZR52 646 aa10.63□□□□□ -0.71
CD4-212ENST00000544344 ZNF738Q8NE65 137 aa10.63□□□□□ -0.71
CD4-212ENST00000544344 TMEM263Q8WUH6 116 aaKnown RBP10.63□□□□□ -0.71
CD4-212ENST00000544344 GPR82Q96P67 336 aa10.63□□□□□ -0.71
CD4-212ENST00000544344 SHPKQ9UHJ6 478 aa10.63□□□□□ -0.71
CD4-212ENST00000544344 H3BNG1 76 aa10.62□□□□□ -0.71
CD4-212ENST00000544344 PITX3O75364 302 aa10.62□□□□□ -0.71
CD4-212ENST00000544344 PRB4P10163 310 aaPredicted RBP10.62□□□□□ -0.71
CD4-212ENST00000544344 ZNF182P17025 639 aaPredicted RBP10.62□□□□□ -0.71
CD4-212ENST00000544344 ORM2P19652 201 aa10.62□□□□□ -0.71
CD4-212ENST00000544344 HIST1H1AQ02539 215 aaPredicted RBP10.62□□□□□ -0.71
CD4-212ENST00000544344 MZT2AQ6P582 158 aa10.62□□□□□ -0.71
CD4-212ENST00000544344 OR8A1Q8NGG7 326 aa10.62□□□□□ -0.71
CD4-212ENST00000544344 OR10J6PQ8NGY7 276 aa10.62□□□□□ -0.71
CD4-212ENST00000544344 DISC1C4P0D8 188 aa10.61□□□□□ -0.71
CD4-212ENST00000544344 CXCL3P19876 107 aa10.61□□□□□ -0.71
CD4-212ENST00000544344 KRTAP10-1P60331 282 aa10.61□□□□□ -0.71
CD4-212ENST00000544344 SSBP1Q04837 148 aaKnown RBP10.61□□□□□ -0.71
CD4-212ENST00000544344 FGL1Q08830 312 aa10.61□□□□□ -0.71
CD4-212ENST00000544344 KIR3DS1Q14943 382 aa10.61□□□□□ -0.71
CD4-212ENST00000544344 FRZBQ92765 325 aa10.61□□□□□ -0.71
CD4-212ENST00000544344 MIXL1Q9H2W2 232 aa10.61□□□□□ -0.71
CD4-212ENST00000544344 H3BRN7 92 aa10.6□□□□□ -0.71
CD4-212ENST00000544344 IAPPP10997 89 aa10.6□□□□□ -0.71
CD4-212ENST00000544344 RHOBP62745 196 aa10.6□□□□□ -0.71
CD4-212ENST00000544344 CDPF1Q6NVV7 123 aa10.6□□□□□ -0.71
CD4-212ENST00000544344 OR51S1Q8NGJ8 323 aa10.6□□□□□ -0.71
CD4-212ENST00000544344 C15orf40Q8WUR7 153 aa10.6□□□□□ -0.71
CD4-212ENST00000544344 KCNIP3Q9Y2W7 256 aa10.6□□□□□ -0.71
CD4-212ENST00000544344 A0A096LPF7 62 aa10.59□□□□□ -0.71
CD4-212ENST00000544344 H7BYZ3 331 aa10.59□□□□□ -0.71
CD4-212ENST00000544344 CDKN1BP46527 198 aa10.59□□□□□ -0.71
CD4-212ENST00000544344 RAB11AP62491 216 aa10.59□□□□□ -0.71
CD4-212ENST00000544344 BPIFCQ8NFQ6 507 aa10.59□□□□□ -0.71
CD4-212ENST00000544344 OR1S1Q8NH92 325 aa10.59□□□□□ -0.71
CD4-212ENST00000544344 VSIG2Q96IQ7 327 aa10.59□□□□□ -0.71
CD4-212ENST00000544344 SHANK2-AS3Q9BTD1 123 aa10.59□□□□□ -0.71
CD4-212ENST00000544344 TMEM147Q9BVK8 224 aa10.59□□□□□ -0.71
CD4-212ENST00000544344 MDFICQ9P1T7 246 aa10.59□□□□□ -0.71
CD4-212ENST00000544344 A0A087WXM4 84 aa10.58□□□□□ -0.72
CD4-212ENST00000544344 GAGE12BA1L429 117 aa10.58□□□□□ -0.72
CD4-212ENST00000544344 GAGE7O76087 117 aa10.58□□□□□ -0.72
CD4-212ENST00000544344 GAGE12FP0CL80 117 aa10.58□□□□□ -0.72
CD4-212ENST00000544344 GAGE12GP0CL81 117 aa10.58□□□□□ -0.72
CD4-212ENST00000544344 GAGE12IP0CL82 117 aa10.58□□□□□ -0.72
CD4-212ENST00000544344 AKAIN1P0CW23 69 aa10.58□□□□□ -0.72
CD4-212ENST00000544344 AKR1C4P17516 323 aa10.58□□□□□ -0.72
CD4-212ENST00000544344 PSG3Q16557 428 aa10.58□□□□□ -0.72
CD4-212ENST00000544344 SMIM4Q8WVI0 70 aa10.58□□□□□ -0.72
CD4-212ENST00000544344 AP3S1Q92572 193 aa10.58□□□□□ -0.72
CD4-212ENST00000544344 PRRT1Q99946 306 aa10.58□□□□□ -0.72
CD4-212ENST00000544344 MRPS26Q9BYN8 205 aaKnown RBP10.58□□□□□ -0.72
CD4-212ENST00000544344 VCX3AQ9NNX9 186 aa10.58□□□□□ -0.72
CD4-212ENST00000544344 TNFRSF18Q9Y5U5 241 aa10.58□□□□□ -0.72
CD4-212ENST00000544344 A0A087X0K7 114 aa10.57□□□□□ -0.72
CD4-212ENST00000544344 SMR3BP02814 79 aaPredicted RBP10.57□□□□□ -0.72
CD4-212ENST00000544344 MRPS10P82664 201 aaKnown RBP10.57□□□□□ -0.72
CD4-212ENST00000544344 CTF1Q16619 201 aa10.57□□□□□ -0.72
CD4-212ENST00000544344 C18orf15Q96N68 181 aa10.57□□□□□ -0.72
CD4-212ENST00000544344 PARD6GQ9BYG4 376 aaPredicted RBP10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms