RNA–Protein interactions for RNA: ENST00000543721.1

LMO3-229, Transcript of LIM domain only 3, humanhuman

TSL 2

Gene LMO3, Length 3,626 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-229ENST00000543721 TCTAP57738 103 aa4□□□□□ -1.77
LMO3-229ENST00000543721 KLRD1Q13241 179 aa4□□□□□ -1.77
LMO3-229ENST00000543721 KLF17Q5JT82 389 aaPredicted RBP4□□□□□ -1.77
LMO3-229ENST00000543721 TMEM108Q6UXF1 575 aa4□□□□□ -1.77
LMO3-229ENST00000543721 ZNF833PQ6ZTB9 187 aa4□□□□□ -1.77
LMO3-229ENST00000543721 ZC2HC1AQ96GY0 325 aa4□□□□□ -1.77
LMO3-229ENST00000543721 SPAG8Q99932 426 aaPredicted RBP4□□□□□ -1.77
LMO3-229ENST00000543721 MAP1LC3AQ9H492 121 aa4□□□□□ -1.77
LMO3-229ENST00000543721 ZMAT4Q9H898 229 aa4□□□□□ -1.77
LMO3-229ENST00000543721 A0A096LNJ9 63 aa3.99□□□□□ -1.77
LMO3-229ENST00000543721 D6R8Y8 96 aa3.99□□□□□ -1.77
LMO3-229ENST00000543721 IGKCP01834 107 aa3.99□□□□□ -1.77
LMO3-229ENST00000543721 CRYBA4P53673 196 aa3.99□□□□□ -1.77
LMO3-229ENST00000543721 ZNF562Q6V9R5 426 aa3.99□□□□□ -1.77
LMO3-229ENST00000543721 GOLT1AQ6ZVE7 132 aa3.99□□□□□ -1.77
LMO3-229ENST00000543721 TMEM116Q8NCL8 245 aa3.99□□□□□ -1.77
LMO3-229ENST00000543721 PHLDA1Q8WV24 401 aaPredicted RBP3.99□□□□□ -1.77
LMO3-229ENST00000543721 SGK494Q96LW2 274 aa3.99□□□□□ -1.77
LMO3-229ENST00000543721 TRAV26-1A0A087WT03 109 aa3.99□□□□□ -1.77
LMO3-229ENST00000543721 TRGV5A0A0B4J1U4 118 aa3.99□□□□□ -1.77
LMO3-229ENST00000543721 DPM2O94777 84 aa3.99□□□□□ -1.77
LMO3-229ENST00000543721 AVPP01185 164 aa3.99□□□□□ -1.77
LMO3-229ENST00000543721 TFF1P04155 84 aa3.99□□□□□ -1.77
LMO3-229ENST00000543721 FCER1GP30273 86 aa3.99□□□□□ -1.77
LMO3-229ENST00000543721 CKS2P33552 79 aa3.99□□□□□ -1.77
LMO3-229ENST00000543721 MEOX1P50221 254 aa3.99□□□□□ -1.77
LMO3-229ENST00000543721 CCL11P51671 97 aa3.99□□□□□ -1.77
LMO3-229ENST00000543721 FXYD2P54710 66 aa3.99□□□□□ -1.77
LMO3-229ENST00000543721 C5orf64Q2M2E5 130 aa3.99□□□□□ -1.77
LMO3-229ENST00000543721 PVRIGQ6DKI7 326 aa3.99□□□□□ -1.77
LMO3-229ENST00000543721 LINC00696Q6ZRV3 163 aa3.99□□□□□ -1.77
LMO3-229ENST00000543721 PCP2Q8IVA1 136 aa3.99□□□□□ -1.77
LMO3-229ENST00000543721 NHP2Q9NX24 153 aaKnown RBP3.99□□□□□ -1.77
LMO3-229ENST00000543721 PSG8Q9UQ74 426 aa3.99□□□□□ -1.77
LMO3-229ENST00000543721 F11RQ9Y624 299 aaKnown RBP3.99□□□□□ -1.77
LMO3-229ENST00000543721 TPRP12270 2363 aaKnown RBP3.99□□□□□ -1.77
LMO3-229ENST00000543721 A0A0C4DFX4 3053 aa3.99□□□□□ -1.77
LMO3-229ENST00000543721 LINC01546A6NGU7 62 aa3.99□□□□□ -1.77
LMO3-229ENST00000543721 K7EM74 188 aa3.99□□□□□ -1.77
LMO3-229ENST00000543721 NKX2-8O15522 239 aa3.99□□□□□ -1.77
LMO3-229ENST00000543721 IGHV3-13P01766 116 aa3.99□□□□□ -1.77
LMO3-229ENST00000543721 WFDC2Q14508 124 aa3.99□□□□□ -1.77
LMO3-229ENST00000543721 Q5PR19 223 aa3.99□□□□□ -1.77
LMO3-229ENST00000543721 C1orf229Q6ZS94 237 aaPredicted RBP3.99□□□□□ -1.77
LMO3-229ENST00000543721 ZNRF1Q8ND25 227 aa3.99□□□□□ -1.77
LMO3-229ENST00000543721 RITA1Q96K30 269 aa3.99□□□□□ -1.77
LMO3-229ENST00000543721 RNF7Q9UBF6 113 aa3.99□□□□□ -1.77
LMO3-229ENST00000543721 CENPFP49454 3210 aa3.98□□□□□ -1.77
LMO3-229ENST00000543721 TRBV25-1A0A075B6N4 114 aa3.98□□□□□ -1.77
LMO3-229ENST00000543721 LOC389332A0A1B0GUA5 103 aa3.98□□□□□ -1.77
LMO3-229ENST00000543721 H3BMG7 143 aa3.98□□□□□ -1.77
LMO3-229ENST00000543721 PLAUP00749 431 aa3.98□□□□□ -1.77
LMO3-229ENST00000543721 LHBP01229 141 aa3.98□□□□□ -1.77
LMO3-229ENST00000543721 IGKV1-16P04430 117 aa3.98□□□□□ -1.77
LMO3-229ENST00000543721 PRSS1P07477 247 aa3.98□□□□□ -1.77
LMO3-229ENST00000543721 CXCL12P48061 93 aa3.98□□□□□ -1.77
LMO3-229ENST00000543721 RRN3P1Q2M238 152 aa3.98□□□□□ -1.77
LMO3-229ENST00000543721 C12orf74Q32Q52 190 aa3.98□□□□□ -1.77
LMO3-229ENST00000543721 ETDBQ3ZM63 59 aa3.98□□□□□ -1.77
LMO3-229ENST00000543721 ASPHD1Q5U4P2 390 aa3.98□□□□□ -1.77
LMO3-229ENST00000543721 C8orf31Q8N9H6 132 aa3.98□□□□□ -1.77
LMO3-229ENST00000543721 LEAP2Q969E1 77 aa3.98□□□□□ -1.77
LMO3-229ENST00000543721 LINC00312Q9Y6C7 94 aa3.98□□□□□ -1.77
LMO3-229ENST00000543721 KIAA0100Q14667 2235 aaKnown RBP3.98□□□□□ -1.77
LMO3-229ENST00000543721 A0A1B0GWB2 263 aa3.98□□□□□ -1.77
LMO3-229ENST00000543721 TMEM262E9PQX1 116 aa3.98□□□□□ -1.77
LMO3-229ENST00000543721 LYZL6O75951 148 aa3.98□□□□□ -1.77
LMO3-229ENST00000543721 APOMO95445 188 aa3.98□□□□□ -1.77
LMO3-229ENST00000543721 IGLV1-44P01699 117 aa3.98□□□□□ -1.77
LMO3-229ENST00000543721 IGLV2-11P01706 119 aa3.98□□□□□ -1.77
LMO3-229ENST00000543721 COL8A2P25067 703 aa3.98□□□□□ -1.77
LMO3-229ENST00000543721 GATA4P43694 442 aa3.98□□□□□ -1.77
LMO3-229ENST00000543721 WT1-ASQ06250 92 aa3.98□□□□□ -1.77
LMO3-229ENST00000543721 C8orf86Q6ZUL3 223 aa3.98□□□□□ -1.77
LMO3-229ENST00000543721 TRIOBPQ9H2D6 2365 aa3.97□□□□□ -1.77
LMO3-229ENST00000543721 CECR9P0C854 216 aa3.97□□□□□ -1.77
LMO3-229ENST00000543721 SSBP2P81877 361 aaPredicted RBP3.97□□□□□ -1.77
LMO3-229ENST00000543721 SRSF2Q01130 221 aaKnown RBP3.97□□□□□ -1.77
LMO3-229ENST00000543721 PAX8Q06710 450 aa3.97□□□□□ -1.77
LMO3-229ENST00000543721 FOXE3Q13461 319 aa3.97□□□□□ -1.77
LMO3-229ENST00000543721 PDE6HQ13956 83 aa3.97□□□□□ -1.77
LMO3-229ENST00000543721 MRPL51Q4U2R6 128 aaKnown RBP3.97□□□□□ -1.77
LMO3-229ENST00000543721 LINC00311Q8N616 119 aa3.97□□□□□ -1.77
LMO3-229ENST00000543721 C1QTNF4Q9BXJ3 329 aa3.97□□□□□ -1.77
LMO3-229ENST00000543721 NGBQ9NPG2 151 aa3.97□□□□□ -1.77
LMO3-229ENST00000543721 TANC2Q9HCD6 1990 aa3.97□□□□□ -1.77
LMO3-229ENST00000543721 NCBP2LA6PVI3 153 aaKnown RBP3.97□□□□□ -1.77
LMO3-229ENST00000543721 NPIPB5A8MRT5 1133 aa3.97□□□□□ -1.77
LMO3-229ENST00000543721 OVOL3O00110 214 aa3.97□□□□□ -1.77
LMO3-229ENST00000543721 SPINK8P0C7L1 97 aa3.97□□□□□ -1.77
LMO3-229ENST00000543721 TNFRSF1AP19438 455 aa3.97□□□□□ -1.77
LMO3-229ENST00000543721 ADIPOQQ15848 244 aa3.97□□□□□ -1.77
LMO3-229ENST00000543721 LYZL1Q6UWQ5 148 aa3.97□□□□□ -1.77
LMO3-229ENST00000543721 MOGAT3Q86VF5 341 aa3.97□□□□□ -1.77
LMO3-229ENST00000543721 TMEM178AQ8NBL3 297 aa3.97□□□□□ -1.77
LMO3-229ENST00000543721 MRPL20Q9BYC9 149 aaKnown RBP3.97□□□□□ -1.77
LMO3-229ENST00000543721 AAMDCQ9H7C9 122 aa3.97□□□□□ -1.77
LMO3-229ENST00000543721 DKK4Q9UBT3 224 aa3.97□□□□□ -1.77
LMO3-229ENST00000543721 TRBV19A0A075B6N1 114 aa3.97□□□□□ -1.77
LMO3-229ENST00000543721 IGHV3OR15-7A0A075B7D8 119 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms