RNA–Protein interactions for RNA: ENST00000543510.1

TMEM258-207, Transcript of transmembrane protein 258, humanhuman

TSL 2 BASIC

Gene TMEM258, Length 1,692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-207ENST00000543510 GNB4Q9HAV0 340 aa11.59□□□□□ -0.55
TMEM258-207ENST00000543510 TRBV7-1A0A0A6YYK4 115 aa11.59□□□□□ -0.55
TMEM258-207ENST00000543510 NDUFA7O95182 113 aa11.59□□□□□ -0.55
TMEM258-207ENST00000543510 PSMB8P28062 276 aa11.59□□□□□ -0.55
TMEM258-207ENST00000543510 GPR183P32249 361 aa11.59□□□□□ -0.55
TMEM258-207ENST00000543510 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.59□□□□□ -0.55
TMEM258-207ENST00000543510 OR4X2Q8NGF9 303 aa11.59□□□□□ -0.55
TMEM258-207ENST00000543510 C11orf52Q96A22 123 aa11.59□□□□□ -0.55
TMEM258-207ENST00000543510 SHANK2-AS3Q9BTD1 123 aa11.59□□□□□ -0.55
TMEM258-207ENST00000543510 A0A0G2JLM5 398 aa11.58□□□□□ -0.56
TMEM258-207ENST00000543510 SCO2A0A1W2PP80 73 aa11.58□□□□□ -0.56
TMEM258-207ENST00000543510 CLEC3BP05452 202 aa11.58□□□□□ -0.56
TMEM258-207ENST00000543510 ELANEP08246 267 aa11.58□□□□□ -0.56
TMEM258-207ENST00000543510 ADMP35318 185 aa11.58□□□□□ -0.56
TMEM258-207ENST00000543510 FOXE3Q13461 319 aa11.58□□□□□ -0.56
TMEM258-207ENST00000543510 CHRDL1Q9BU40 450 aa11.58□□□□□ -0.56
TMEM258-207ENST00000543510 TUBA4BQ9H853 241 aa11.58□□□□□ -0.56
TMEM258-207ENST00000543510 TMEM14CQ9P0S9 112 aa11.58□□□□□ -0.56
TMEM258-207ENST00000543510 A0A087WWC5 75 aa11.57□□□□□ -0.56
TMEM258-207ENST00000543510 CLPSL1A2RUU4 121 aa11.57□□□□□ -0.56
TMEM258-207ENST00000543510 H3BRN7 92 aa11.57□□□□□ -0.56
TMEM258-207ENST00000543510 SUMO1P63165 101 aaKnown RBP11.57□□□□□ -0.56
TMEM258-207ENST00000543510 LEMD1Q68G75 181 aa11.57□□□□□ -0.56
TMEM258-207ENST00000543510 USMG5Q96IX5 58 aa11.57□□□□□ -0.56
TMEM258-207ENST00000543510 ATP6V0BQ99437 205 aa11.57□□□□□ -0.56
TMEM258-207ENST00000543510 TMEM89A2RUT3 159 aa11.56□□□□□ -0.56
TMEM258-207ENST00000543510 GGTLC3B5MD39 225 aa11.56□□□□□ -0.56
TMEM258-207ENST00000543510 PPP5D1E7EU14 171 aa11.56□□□□□ -0.56
TMEM258-207ENST00000543510 TSPAN4O14817 238 aa11.56□□□□□ -0.56
TMEM258-207ENST00000543510 NBEAP1P0C6P0 100 aa11.56□□□□□ -0.56
TMEM258-207ENST00000543510 GP9P14770 177 aa11.56□□□□□ -0.56
TMEM258-207ENST00000543510 RPL23P62829 140 aaKnown RBP11.56□□□□□ -0.56
TMEM258-207ENST00000543510 USF2Q15853 346 aaPredicted RBP11.56□□□□□ -0.56
TMEM258-207ENST00000543510 ZNF343Q6P1L6 599 aa11.56□□□□□ -0.56
TMEM258-207ENST00000543510 ZNF600Q6ZNG1 722 aa11.56□□□□□ -0.56
TMEM258-207ENST00000543510 CCDC140Q96MF4 163 aa11.56□□□□□ -0.56
TMEM258-207ENST00000543510 TMA7Q9Y2S6 64 aaKnown RBP11.56□□□□□ -0.56
TMEM258-207ENST00000543510 JMJD1CQ15652 2540 aa11.56□□□□□ -0.56
TMEM258-207ENST00000543510 IGHV3-35A0A0C4DH35 117 aa11.55□□□□□ -0.56
TMEM258-207ENST00000543510 CD28P10747 220 aa11.55□□□□□ -0.56
TMEM258-207ENST00000543510 CRYBB3P26998 211 aa11.55□□□□□ -0.56
TMEM258-207ENST00000543510 ADIRFQ15847 76 aa11.55□□□□□ -0.56
TMEM258-207ENST00000543510 DERL1Q9BUN8 251 aa11.55□□□□□ -0.56
TMEM258-207ENST00000543510 NIPBLQ6KC79 2804 aaeCLIP11.55□□□□□ -0.56
TMEM258-207ENST00000543510 C2CD3Q4AC94 2353 aa11.55□□□□□ -0.56
TMEM258-207ENST00000543510 A0A1W2PRX2 142 aa11.55□□□□□ -0.56
TMEM258-207ENST00000543510 TGOLN2O43493 480 aa11.55□□□□□ -0.56
TMEM258-207ENST00000543510 HIST1H1EP10412 219 aaKnown RBP11.55□□□□□ -0.56
TMEM258-207ENST00000543510 BLNKQ8WV28 456 aa11.55□□□□□ -0.56
TMEM258-207ENST00000543510 ELOVL1Q9BW60 279 aa11.55□□□□□ -0.56
TMEM258-207ENST00000543510 ZNF98A6NK75 572 aa11.54□□□□□ -0.56
TMEM258-207ENST00000543510 TRBV12-3P01733 135 aa11.54□□□□□ -0.56
TMEM258-207ENST00000543510 S100A7P31151 101 aa11.54□□□□□ -0.56
TMEM258-207ENST00000543510 ARL3P36405 182 aa11.54□□□□□ -0.56
TMEM258-207ENST00000543510 RANP62826 216 aaKnown RBP11.54□□□□□ -0.56
TMEM258-207ENST00000543510 BPIFA4PQ86YQ2 179 aa11.54□□□□□ -0.56
TMEM258-207ENST00000543510 C15orf54Q8N8G6 183 aa11.54□□□□□ -0.56
TMEM258-207ENST00000543510 RABAC1Q9UI14 185 aa11.54□□□□□ -0.56
TMEM258-207ENST00000543510 RNF24Q9Y225 148 aa11.54□□□□□ -0.56
TMEM258-207ENST00000543510 PRELID1Q9Y255 219 aa11.54□□□□□ -0.56
TMEM258-207ENST00000543510 HELTA6NFD8 242 aa11.53□□□□□ -0.56
TMEM258-207ENST00000543510 SNRPCP09234 159 aaKnown RBP11.53□□□□□ -0.56
TMEM258-207ENST00000543510 MYCNOSP40205 109 aa11.53□□□□□ -0.56
TMEM258-207ENST00000543510 TCTEX1D4Q5JR98 221 aa11.53□□□□□ -0.56
TMEM258-207ENST00000543510 TOMM20LQ6UXN7 152 aa11.53□□□□□ -0.56
TMEM258-207ENST00000543510 C18orf65Q6ZTR6 163 aa11.53□□□□□ -0.56
TMEM258-207ENST00000543510 ZNF414Q96IQ9 312 aa11.53□□□□□ -0.56
TMEM258-207ENST00000543510 TCEAL7Q9BRU2 100 aa11.53□□□□□ -0.56
TMEM258-207ENST00000543510 CTDSP1Q9GZU7 261 aa11.53□□□□□ -0.56
TMEM258-207ENST00000543510 SETD2Q9BYW2 2564 aaPredicted RBP11.53□□□□□ -0.56
TMEM258-207ENST00000543510 CXorf65A6NEN9 183 aa11.52□□□□□ -0.56
TMEM258-207ENST00000543510 COLCA2A8K830 154 aa11.52□□□□□ -0.56
TMEM258-207ENST00000543510 BMPR1BO00238 502 aa11.52□□□□□ -0.56
TMEM258-207ENST00000543510 MT-ND4LP03901 98 aa11.52□□□□□ -0.56
TMEM258-207ENST00000543510 RPL35P42766 123 aaKnown RBP11.52□□□□□ -0.56
TMEM258-207ENST00000543510 PROK1P58294 105 aa11.52□□□□□ -0.56
TMEM258-207ENST00000543510 RELQ04864 619 aaPredicted RBP11.52□□□□□ -0.56
TMEM258-207ENST00000543510 KLHL30-AS1Q8NEE0 82 aa11.52□□□□□ -0.56
TMEM258-207ENST00000543510 OR4F17Q8NGA8 305 aa11.52□□□□□ -0.56
TMEM258-207ENST00000543510 TMEM242Q9NWH2 141 aa11.52□□□□□ -0.56
TMEM258-207ENST00000543510 ZNF586Q9NXT0 402 aa11.52□□□□□ -0.56
TMEM258-207ENST00000543510 IGHV3OR16-8A0A075B7F1 116 aa11.52□□□□□ -0.57
TMEM258-207ENST00000543510 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.52□□□□□ -0.57
TMEM258-207ENST00000543510 PGPA6NDG6 321 aa11.52□□□□□ -0.57
TMEM258-207ENST00000543510 C9JCJ5 164 aa11.52□□□□□ -0.57
TMEM258-207ENST00000543510 FOXL1Q12952 345 aa11.52□□□□□ -0.57
TMEM258-207ENST00000543510 RNF212Q495C1 297 aa11.52□□□□□ -0.57
TMEM258-207ENST00000543510 LINC01551Q86U37 167 aa11.52□□□□□ -0.57
TMEM258-207ENST00000543510 PRIMA1Q86XR5 153 aa11.52□□□□□ -0.57
TMEM258-207ENST00000543510 C2CD4CQ8TF44 421 aa11.52□□□□□ -0.57
TMEM258-207ENST00000543510 ISOC2Q96AB3 205 aa11.52□□□□□ -0.57
TMEM258-207ENST00000543510 UBE2E2Q96LR5 201 aa11.52□□□□□ -0.57
TMEM258-207ENST00000543510 CITED2Q99967 270 aaPredicted RBP11.52□□□□□ -0.57
TMEM258-207ENST00000543510 ZFAND3Q9H8U3 227 aa11.52□□□□□ -0.57
TMEM258-207ENST00000543510 PEF1Q9UBV8 284 aaKnown RBP11.52□□□□□ -0.57
TMEM258-207ENST00000543510 TRBV20OR9-2A0A075B6H5 130 aa11.51□□□□□ -0.57
TMEM258-207ENST00000543510 MRPS12O15235 138 aaKnown RBP11.51□□□□□ -0.57
TMEM258-207ENST00000543510 LGALS1P09382 135 aaKnown RBP11.51□□□□□ -0.57
TMEM258-207ENST00000543510 DEFB136Q30KP8 78 aa11.51□□□□□ -0.57
TMEM258-207ENST00000543510 RNF152Q8N8N0 203 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms