RNA–Protein interactions for RNA: ENST00000542786.1

LDB3-207, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 1,889 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-207ENST00000542786 CCDC140Q96MF4 163 aa11.02□□□□□ -0.64
LDB3-207ENST00000542786 GPR82Q96P67 336 aa11.02□□□□□ -0.64
LDB3-207ENST00000542786 RNF24Q9Y225 148 aa11.02□□□□□ -0.64
LDB3-207ENST00000542786 KMT2BQ9UMN6 2715 aaPredicted RBP11.02□□□□□ -0.65
LDB3-207ENST00000542786 A6NDX4 124 aa11.02□□□□□ -0.65
LDB3-207ENST00000542786 SLC25A16P16260 332 aa11.02□□□□□ -0.65
LDB3-207ENST00000542786 Q86TA4 180 aa11.02□□□□□ -0.65
LDB3-207ENST00000542786 TMEM183AQ8IXX5 376 aa11.02□□□□□ -0.65
LDB3-207ENST00000542786 LYPD1Q8N2G4 141 aa11.02□□□□□ -0.65
LDB3-207ENST00000542786 NUDT10Q8NFP7 164 aa11.02□□□□□ -0.65
LDB3-207ENST00000542786 OR4F17Q8NGA8 305 aa11.02□□□□□ -0.65
LDB3-207ENST00000542786 NUDT11Q96G61 164 aa11.02□□□□□ -0.65
LDB3-207ENST00000542786 TRAPPC1Q9Y5R8 145 aa11.02□□□□□ -0.65
LDB3-207ENST00000542786 LRRK2Q5S007 2527 aa11.01□□□□□ -0.65
LDB3-207ENST00000542786 UTP20O75691 2785 aaKnown RBP11.01□□□□□ -0.65
LDB3-207ENST00000542786 XKRY2A2RUG3 117 aa11.01□□□□□ -0.65
LDB3-207ENST00000542786 ZNF785A8K8V0 405 aa11.01□□□□□ -0.65
LDB3-207ENST00000542786 B4DSR2 109 aa11.01□□□□□ -0.65
LDB3-207ENST00000542786 CBLN1P23435 193 aa11.01□□□□□ -0.65
LDB3-207ENST00000542786 Q71RC1 249 aaPredicted RBP11.01□□□□□ -0.65
LDB3-207ENST00000542786 SGK494Q96LW2 274 aa11.01□□□□□ -0.65
LDB3-207ENST00000542786 ZFAND3Q9H8U3 227 aa11.01□□□□□ -0.65
LDB3-207ENST00000542786 GAR1Q9NY12 217 aaKnown RBP11.01□□□□□ -0.65
LDB3-207ENST00000542786 FBN2P35556 2912 aa11.01□□□□□ -0.65
LDB3-207ENST00000542786 TRAV20A0A0B4J274 112 aa11□□□□□ -0.65
LDB3-207ENST00000542786 UBE2G1P62253 170 aa11□□□□□ -0.65
LDB3-207ENST00000542786 LINC00322Q6ZN03 302 aaPredicted RBP11□□□□□ -0.65
LDB3-207ENST00000542786 HIST1H2BLQ99880 126 aa11□□□□□ -0.65
LDB3-207ENST00000542786 PRSS22Q9GZN4 317 aa11□□□□□ -0.65
LDB3-207ENST00000542786 HIF1ANQ9NWT6 349 aa11□□□□□ -0.65
LDB3-207ENST00000542786 ZNF492Q9P255 531 aa11□□□□□ -0.65
LDB3-207ENST00000542786 RPH3ALQ9UNE2 315 aa11□□□□□ -0.65
LDB3-207ENST00000542786 C19orf71A6NCJ1 209 aa11□□□□□ -0.65
LDB3-207ENST00000542786 CA1P00915 261 aaPredicted RBP11□□□□□ -0.65
LDB3-207ENST00000542786 GPR183P32249 361 aa11□□□□□ -0.65
LDB3-207ENST00000542786 PDE6HQ13956 83 aa11□□□□□ -0.65
LDB3-207ENST00000542786 PDZD11Q5EBL8 140 aa11□□□□□ -0.65
LDB3-207ENST00000542786 TRAV8-1A0A0A6YYK1 113 aa10.99□□□□□ -0.65
LDB3-207ENST00000542786 A1L4Q6 167 aa10.99□□□□□ -0.65
LDB3-207ENST00000542786 ZNF705GA8MUZ8 300 aaPredicted RBP10.99□□□□□ -0.65
LDB3-207ENST00000542786 TCL1AP56279 114 aa10.99□□□□□ -0.65
LDB3-207ENST00000542786 TOMM20LQ6UXN7 152 aa10.99□□□□□ -0.65
LDB3-207ENST00000542786 GOLT1AQ6ZVE7 132 aa10.99□□□□□ -0.65
LDB3-207ENST00000542786 S100A7AQ86SG5 101 aa10.99□□□□□ -0.65
LDB3-207ENST00000542786 GRAMD2BQ96HH9 432 aa10.99□□□□□ -0.65
LDB3-207ENST00000542786 GNB1LQ9BYB4 327 aa10.99□□□□□ -0.65
LDB3-207ENST00000542786 FAM208BQ5VWN6 2430 aa10.98□□□□□ -0.65
LDB3-207ENST00000542786 TRAV41A0A0B4J266 112 aa10.98□□□□□ -0.65
LDB3-207ENST00000542786 CLPSL1A2RUU4 121 aa10.98□□□□□ -0.65
LDB3-207ENST00000542786 IZUMO1RA6ND01 250 aa10.98□□□□□ -0.65
LDB3-207ENST00000542786 GATCO43716 136 aaKnown RBP10.98□□□□□ -0.65
LDB3-207ENST00000542786 IGF1P05019 195 aa10.98□□□□□ -0.65
LDB3-207ENST00000542786 GATA3P23771 443 aa10.98□□□□□ -0.65
LDB3-207ENST00000542786 PYY3Q5JQD4 70 aa10.98□□□□□ -0.65
LDB3-207ENST00000542786 C16orf54Q6UWD8 224 aa10.98□□□□□ -0.65
LDB3-207ENST00000542786 TMEM136Q6ZRR5 245 aa10.98□□□□□ -0.65
LDB3-207ENST00000542786 SMAD5-AS1Q9Y6J3 95 aa10.98□□□□□ -0.65
LDB3-207ENST00000542786 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.98□□□□□ -0.65
LDB3-207ENST00000542786 SCGB2A1O75556 95 aa10.98□□□□□ -0.65
LDB3-207ENST00000542786 AMBPP02760 352 aa10.98□□□□□ -0.65
LDB3-207ENST00000542786 IER3P46695 156 aa10.98□□□□□ -0.65
LDB3-207ENST00000542786 KRTAP10-9P60411 292 aa10.98□□□□□ -0.65
LDB3-207ENST00000542786 TMEM75Q8N9X5 138 aa10.98□□□□□ -0.65
LDB3-207ENST00000542786 OR10D4PQ8NGN7 298 aa10.98□□□□□ -0.65
LDB3-207ENST00000542786 ATP6V0BQ99437 205 aa10.98□□□□□ -0.65
LDB3-207ENST00000542786 MRPL18Q9H0U6 180 aaKnown RBP10.98□□□□□ -0.65
LDB3-207ENST00000542786 NPIPB6E9PJ23 425 aa10.97□□□□□ -0.65
LDB3-207ENST00000542786 H3BUX3 64 aa10.97□□□□□ -0.65
LDB3-207ENST00000542786 BRI3O95415 125 aa10.97□□□□□ -0.65
LDB3-207ENST00000542786 IGHG2P01859 326 aa10.97□□□□□ -0.65
LDB3-207ENST00000542786 CLEC3BP05452 202 aa10.97□□□□□ -0.65
LDB3-207ENST00000542786 S100A2P29034 98 aa10.97□□□□□ -0.65
LDB3-207ENST00000542786 CMTM2Q8TAZ6 248 aa10.97□□□□□ -0.65
LDB3-207ENST00000542786 WIPF2Q8TF74 440 aaPredicted RBP10.97□□□□□ -0.65
LDB3-207ENST00000542786 SERTAD4Q9NUC0 356 aa10.97□□□□□ -0.65
LDB3-207ENST00000542786 RABAC1Q9UI14 185 aa10.97□□□□□ -0.65
LDB3-207ENST00000542786 TP53TG3Q9ULZ0 132 aa10.97□□□□□ -0.65
LDB3-207ENST00000542786 TRBV7-1A0A0A6YYK4 115 aa10.96□□□□□ -0.65
LDB3-207ENST00000542786 DIRC3C9JPN6 131 aa10.96□□□□□ -0.65
LDB3-207ENST00000542786 FABP4P15090 132 aa10.96□□□□□ -0.65
LDB3-207ENST00000542786 RPL7P18124 248 aaKnown RBP10.96□□□□□ -0.65
LDB3-207ENST00000542786 CT83Q5H943 113 aa10.96□□□□□ -0.65
LDB3-207ENST00000542786 PRR27Q6MZM9 219 aa10.96□□□□□ -0.65
LDB3-207ENST00000542786 LINC01356Q8N9X3 169 aa10.96□□□□□ -0.65
LDB3-207ENST00000542786 TSKUQ8WUA8 353 aa10.96□□□□□ -0.65
LDB3-207ENST00000542786 EEF1AKMT3Q96AZ1 226 aa10.96□□□□□ -0.65
LDB3-207ENST00000542786 MS4A10Q96PG2 267 aa10.96□□□□□ -0.65
LDB3-207ENST00000542786 A0A1B0GUS0 222 aa10.95□□□□□ -0.66
LDB3-207ENST00000542786 FAM223BA6NKX1 122 aa10.95□□□□□ -0.66
LDB3-207ENST00000542786 M0R3E3 92 aa10.95□□□□□ -0.66
LDB3-207ENST00000542786 BMPR1BO00238 502 aa10.95□□□□□ -0.66
LDB3-207ENST00000542786 IGHG4P01861 327 aa10.95□□□□□ -0.66
LDB3-207ENST00000542786 PPIFP30405 207 aaKnown RBP10.95□□□□□ -0.66
LDB3-207ENST00000542786 LINC00310P59036 64 aa10.95□□□□□ -0.66
LDB3-207ENST00000542786 SLC35B1P78383 322 aa10.95□□□□□ -0.66
LDB3-207ENST00000542786 LY6EQ16553 131 aa10.95□□□□□ -0.66
LDB3-207ENST00000542786 COX19Q49B96 90 aa10.95□□□□□ -0.66
LDB3-207ENST00000542786 CLEC19AQ6UXS0 136 aa10.95□□□□□ -0.66
LDB3-207ENST00000542786 FAM223AQ8IWN6 122 aa10.95□□□□□ -0.66
LDB3-207ENST00000542786 NUP35Q8NFH5 326 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms