RNA–Protein interactions for RNA: ENST00000541363.5

HMGA2-210, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA2, Length 8,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-210ENST00000541363 SVIPQ8NHG7 77 aa12.65□□□□□ -0.38
HMGA2-210ENST00000541363 RSPO4Q2I0M5 234 aaPredicted RBP12.65□□□□□ -0.38
HMGA2-210ENST00000541363 BMPERQ8N8U9 685 aa12.65□□□□□ -0.38
HMGA2-210ENST00000541363 SEC61GP60059 68 aa12.65□□□□□ -0.38
HMGA2-210ENST00000541363 ZC2HC1BQ5TFG8 222 aa12.65□□□□□ -0.38
HMGA2-210ENST00000541363 C1QCP02747 245 aa12.65□□□□□ -0.38
HMGA2-210ENST00000541363 F8W1H4 67 aa12.65□□□□□ -0.39
HMGA2-210ENST00000541363 MORN5Q5VZ52 161 aa12.64□□□□□ -0.39
HMGA2-210ENST00000541363 ANKRD29Q8N6D5 301 aa12.64□□□□□ -0.39
HMGA2-210ENST00000541363 F5H768 121 aa12.64□□□□□ -0.39
HMGA2-210ENST00000541363 PRB4P10163 310 aaPredicted RBP12.64□□□□□ -0.39
HMGA2-210ENST00000541363 DAD1P61803 113 aa12.64□□□□□ -0.39
HMGA2-210ENST00000541363 NDPQ00604 133 aa12.64□□□□□ -0.39
HMGA2-210ENST00000541363 TRBV24-1A0A075B6N3 115 aa12.64□□□□□ -0.39
HMGA2-210ENST00000541363 TMEM219Q86XT9 240 aa12.64□□□□□ -0.39
HMGA2-210ENST00000541363 C1orf53Q5VUE5 145 aa12.64□□□□□ -0.39
HMGA2-210ENST00000541363 PIP4P2Q8N4L2 257 aa12.64□□□□□ -0.39
HMGA2-210ENST00000541363 NHSQ6T4R5 1651 aa12.64□□□□□ -0.39
HMGA2-210ENST00000541363 FBLN5Q9UBX5 448 aa12.64□□□□□ -0.39
HMGA2-210ENST00000541363 RFPL3SP0C7P2 107 aa12.63□□□□□ -0.39
HMGA2-210ENST00000541363 PARP14Q460N5 1801 aa12.63□□□□□ -0.39
HMGA2-210ENST00000541363 LINC00527Q9UJ94 153 aa12.63□□□□□ -0.39
HMGA2-210ENST00000541363 FOXG1P55316 489 aaPredicted RBP12.63□□□□□ -0.39
HMGA2-210ENST00000541363 KLRD1Q13241 179 aa12.63□□□□□ -0.39
HMGA2-210ENST00000541363 LOC285556D6RIA3 1793 aa12.63□□□□□ -0.39
HMGA2-210ENST00000541363 GREM1O60565 184 aa12.63□□□□□ -0.39
HMGA2-210ENST00000541363 LYPD1Q8N2G4 141 aa12.63□□□□□ -0.39
HMGA2-210ENST00000541363 IGHV2-26A0A0B4J1V2 119 aa12.63□□□□□ -0.39
HMGA2-210ENST00000541363 MINOS1Q5TGZ0 78 aa12.63□□□□□ -0.39
HMGA2-210ENST00000541363 WFDC9Q8NEX5 89 aa12.63□□□□□ -0.39
HMGA2-210ENST00000541363 CHCHD2Q9Y6H1 151 aaPredicted RBP12.63□□□□□ -0.39
HMGA2-210ENST00000541363 MINOS1-NBL1R4GNA1 71 aa12.63□□□□□ -0.39
HMGA2-210ENST00000541363 PLXNA1Q9UIW2 1896 aa12.63□□□□□ -0.39
HMGA2-210ENST00000541363 CXCL1P09341 107 aa12.63□□□□□ -0.39
HMGA2-210ENST00000541363 MRPS18CQ9Y3D5 142 aaKnown RBP12.63□□□□□ -0.39
HMGA2-210ENST00000541363 IGHG2P01859 326 aa12.62□□□□□ -0.39
HMGA2-210ENST00000541363 DOPEY2Q9Y3R5 2298 aa12.62□□□□□ -0.39
HMGA2-210ENST00000541363 I3L3M4 83 aa12.62□□□□□ -0.39
HMGA2-210ENST00000541363 SMKR1H3BMG3 65 aa12.62□□□□□ -0.39
HMGA2-210ENST00000541363 PHF3Q92576 2039 aaKnown RBP12.62□□□□□ -0.39
HMGA2-210ENST00000541363 SHISA9B4DS77 424 aa12.62□□□□□ -0.39
HMGA2-210ENST00000541363 FGF6P10767 208 aa12.62□□□□□ -0.39
HMGA2-210ENST00000541363 PKIGQ9Y2B9 76 aa12.62□□□□□ -0.39
HMGA2-210ENST00000541363 IGKV1D-13A0A0B4J2D9 117 aa12.61□□□□□ -0.39
HMGA2-210ENST00000541363 A0A1B0GWJ7 208 aa12.61□□□□□ -0.39
HMGA2-210ENST00000541363 CELA3AP09093 270 aa12.61□□□□□ -0.39
HMGA2-210ENST00000541363 IGKV1-13P0DP09 117 aa12.61□□□□□ -0.39
HMGA2-210ENST00000541363 CASP8AP2Q9UKL3 1982 aa12.61□□□□□ -0.39
HMGA2-210ENST00000541363 C3orf56Q8N813 242 aa12.61□□□□□ -0.39
HMGA2-210ENST00000541363 C3orf79P0CE67 100 aa12.61□□□□□ -0.39
HMGA2-210ENST00000541363 TREML4Q6UXN2 200 aa12.61□□□□□ -0.39
HMGA2-210ENST00000541363 ATP6V0BQ99437 205 aa12.61□□□□□ -0.39
HMGA2-210ENST00000541363 SMIM10L1P0DMW3 83 aa12.61□□□□□ -0.39
HMGA2-210ENST00000541363 SMIM10Q96HG1 83 aa12.61□□□□□ -0.39
HMGA2-210ENST00000541363 GTF3C1Q12789 2109 aa12.61□□□□□ -0.39
HMGA2-210ENST00000541363 TSSC4Q9Y5U2 329 aaPredicted RBP12.61□□□□□ -0.39
HMGA2-210ENST00000541363 MSRB2Q9Y3D2 182 aa12.6□□□□□ -0.39
HMGA2-210ENST00000541363 ZGRF1Q86YA3 2104 aa12.6□□□□□ -0.39
HMGA2-210ENST00000541363 CTHRC1Q96CG8 243 aa12.6□□□□□ -0.39
HMGA2-210ENST00000541363 SCN10AQ9Y5Y9 1956 aa12.6□□□□□ -0.39
HMGA2-210ENST00000541363 PSME4Q14997 1843 aa12.6□□□□□ -0.39
HMGA2-210ENST00000541363 POU2AF1Q16633 256 aa12.6□□□□□ -0.39
HMGA2-210ENST00000541363 IL17RELQ6ZVW7 336 aa12.6□□□□□ -0.39
HMGA2-210ENST00000541363 DOCK3Q8IZD9 2030 aa12.6□□□□□ -0.39
HMGA2-210ENST00000541363 TEX48A0A1B0GUV7 120 aa12.6□□□□□ -0.39
HMGA2-210ENST00000541363 TP53TG1Q9Y2A0 90 aa12.6□□□□□ -0.39
HMGA2-210ENST00000541363 Q8TAT8 98 aa12.6□□□□□ -0.39
HMGA2-210ENST00000541363 AGMATQ9BSE5 352 aa12.6□□□□□ -0.39
HMGA2-210ENST00000541363 MPZP25189 248 aa12.6□□□□□ -0.39
HMGA2-210ENST00000541363 C9orf118A6NHY6 69 aa12.59□□□□□ -0.39
HMGA2-210ENST00000541363 RHODO00212 210 aa12.59□□□□□ -0.39
HMGA2-210ENST00000541363 UBE2BP63146 152 aa12.59□□□□□ -0.39
HMGA2-210ENST00000541363 SLAQ13239 276 aa12.59□□□□□ -0.39
HMGA2-210ENST00000541363 STPG4Q8N801 248 aa12.59□□□□□ -0.39
HMGA2-210ENST00000541363 GFRA4Q9GZZ7 299 aa12.59□□□□□ -0.39
HMGA2-210ENST00000541363 RFNGQ9Y644 331 aa12.59□□□□□ -0.39
HMGA2-210ENST00000541363 AMN1Q8IY45 258 aa12.59□□□□□ -0.39
HMGA2-210ENST00000541363 DEFB105AQ8NG35 78 aa12.59□□□□□ -0.39
HMGA2-210ENST00000541363 WDR83OSQ9Y284 106 aa12.59□□□□□ -0.39
HMGA2-210ENST00000541363 TINCRA0A1B0GVN0 87 aa12.59□□□□□ -0.39
HMGA2-210ENST00000541363 A0A1B0GW64 132 aa12.59□□□□□ -0.39
HMGA2-210ENST00000541363 C9orf106Q8NAJ2 232 aa12.59□□□□□ -0.39
HMGA2-210ENST00000541363 LY96Q9Y6Y9 160 aa12.59□□□□□ -0.39
HMGA2-210ENST00000541363 FAM231BA6NCW3 169 aa12.59□□□□□ -0.39
HMGA2-210ENST00000541363 TMEM243Q9BU79 118 aa12.58□□□□□ -0.39
HMGA2-210ENST00000541363 WFDC1Q9HC57 220 aa12.58□□□□□ -0.39
HMGA2-210ENST00000541363 IGHV1-3A0A0C4DH29 117 aa12.58□□□□□ -0.4
HMGA2-210ENST00000541363 VSIRQ9H7M9 311 aa12.58□□□□□ -0.4
HMGA2-210ENST00000541363 CFHR3Q02985 330 aa12.58□□□□□ -0.4
HMGA2-210ENST00000541363 DOCK4Q8N1I0 1966 aa12.58□□□□□ -0.4
HMGA2-210ENST00000541363 C8orf31Q8N9H6 132 aa12.58□□□□□ -0.4
HMGA2-210ENST00000541363 POLEQ07864 2286 aa12.58□□□□□ -0.4
HMGA2-210ENST00000541363 LINC01551Q86U37 167 aa12.57□□□□□ -0.4
HMGA2-210ENST00000541363 NRXN3Q9Y4C0 1643 aa12.57□□□□□ -0.4
HMGA2-210ENST00000541363 OOSP1A8MZH6 123 aa12.57□□□□□ -0.4
HMGA2-210ENST00000541363 AZU1P20160 251 aa12.57□□□□□ -0.4
HMGA2-210ENST00000541363 APOC4P55056 127 aa12.57□□□□□ -0.4
HMGA2-210ENST00000541363 RNF5Q99942 180 aa12.57□□□□□ -0.4
HMGA2-210ENST00000541363 A0A1B0GTI1 187 aa12.57□□□□□ -0.4
HMGA2-210ENST00000541363 SPATA31B1PQ5VZV4 182 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms