RNA–Protein interactions for RNA: ENST00000541280.1

SUDS3-202, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

TSL 5

Gene SUDS3, Length 659 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-202ENST00000541280 RNF24Q9Y225 148 aa4.22□□□□□ -1.73
SUDS3-202ENST00000541280 PKD1L1Q8TDX9 2849 aa4.22□□□□□ -1.73
SUDS3-202ENST00000541280 NOTCH1P46531 2555 aa4.21□□□□□ -1.73
SUDS3-202ENST00000541280 ZNF207O43670 478 aaKnown RBP4.21□□□□□ -1.74
SUDS3-202ENST00000541280 SYNGR2O43760 224 aa4.21□□□□□ -1.74
SUDS3-202ENST00000541280 IGKV1-17P01599 117 aa4.21□□□□□ -1.74
SUDS3-202ENST00000541280 IGHV3-48P01763 117 aa4.21□□□□□ -1.74
SUDS3-202ENST00000541280 AMBPP02760 352 aa4.21□□□□□ -1.74
SUDS3-202ENST00000541280 EDN2P20800 178 aa4.21□□□□□ -1.74
SUDS3-202ENST00000541280 RND2P52198 227 aa4.21□□□□□ -1.74
SUDS3-202ENST00000541280 C1orf194Q5T5A4 169 aa4.21□□□□□ -1.74
SUDS3-202ENST00000541280 GGNBP1Q5YKI7 109 aa4.21□□□□□ -1.74
SUDS3-202ENST00000541280 OR8G2PQ6IF36 304 aa4.21□□□□□ -1.74
SUDS3-202ENST00000541280 OR51G1Q8NGK1 321 aa4.21□□□□□ -1.74
SUDS3-202ENST00000541280 GATAD1Q8WUU5 269 aa4.21□□□□□ -1.74
SUDS3-202ENST00000541280 S100ZQ8WXG8 99 aa4.21□□□□□ -1.74
SUDS3-202ENST00000541280 SLC35E1Q96K37 410 aa4.21□□□□□ -1.74
SUDS3-202ENST00000541280 CCDC32Q9BV29 185 aa4.21□□□□□ -1.74
SUDS3-202ENST00000541280 RBKSQ9H477 322 aa4.21□□□□□ -1.74
SUDS3-202ENST00000541280 FNDC4Q9H6D8 234 aaPredicted RBP4.21□□□□□ -1.74
SUDS3-202ENST00000541280 C9orf170A2RU37 121 aa4.2□□□□□ -1.74
SUDS3-202ENST00000541280 ZFP92A6NM28 416 aa4.2□□□□□ -1.74
SUDS3-202ENST00000541280 MPTX1A8MV57 137 aa4.2□□□□□ -1.74
SUDS3-202ENST00000541280 WRBO00258 174 aa4.2□□□□□ -1.74
SUDS3-202ENST00000541280 APOHP02749 345 aaPredicted RBP4.2□□□□□ -1.74
SUDS3-202ENST00000541280 OR4E1P0C645 316 aa4.2□□□□□ -1.74
SUDS3-202ENST00000541280 P2RY1P47900 373 aa4.2□□□□□ -1.74
SUDS3-202ENST00000541280 TAS2R30P59541 319 aa4.2□□□□□ -1.74
SUDS3-202ENST00000541280 NUTF2P61970 127 aaKnown RBP4.2□□□□□ -1.74
SUDS3-202ENST00000541280 SNRPD3P62318 126 aaKnown RBP4.2□□□□□ -1.74
SUDS3-202ENST00000541280 PPP1R1AQ13522 171 aa4.2□□□□□ -1.74
SUDS3-202ENST00000541280 BAK1Q16611 211 aa4.2□□□□□ -1.74
SUDS3-202ENST00000541280 TIGITQ495A1 244 aa4.2□□□□□ -1.74
SUDS3-202ENST00000541280 CASC10Q5T4H9 136 aa4.2□□□□□ -1.74
SUDS3-202ENST00000541280 MZT2BQ6NZ67 158 aa4.2□□□□□ -1.74
SUDS3-202ENST00000541280 MORN3Q6PF18 240 aaPredicted RBP4.2□□□□□ -1.74
SUDS3-202ENST00000541280 C16orf54Q6UWD8 224 aa4.2□□□□□ -1.74
SUDS3-202ENST00000541280 LYG2Q86SG7 212 aa4.2□□□□□ -1.74
SUDS3-202ENST00000541280 TRGV9Q99603 122 aa4.2□□□□□ -1.74
SUDS3-202ENST00000541280 MS4A6AQ9H2W1 248 aa4.2□□□□□ -1.74
SUDS3-202ENST00000541280 FBXL17Q9UF56 701 aa4.2□□□□□ -1.74
SUDS3-202ENST00000541280 RABAC1Q9UI14 185 aa4.2□□□□□ -1.74
SUDS3-202ENST00000541280 STRAPQ9Y3F4 350 aaKnown RBP4.2□□□□□ -1.74
SUDS3-202ENST00000541280 IGHV3OR16-8A0A075B7F1 116 aa4.19□□□□□ -1.74
SUDS3-202ENST00000541280 GAGE10A6NGK3 116 aa4.19□□□□□ -1.74
SUDS3-202ENST00000541280 KRTAP9-6A8MVA2 160 aa4.19□□□□□ -1.74
SUDS3-202ENST00000541280 FNDC10F2Z333 226 aa4.19□□□□□ -1.74
SUDS3-202ENST00000541280 IL4P05112 153 aa4.19□□□□□ -1.74
SUDS3-202ENST00000541280 HOXB5P09067 269 aa4.19□□□□□ -1.74
SUDS3-202ENST00000541280 SPP1P10451 314 aa4.19□□□□□ -1.74
SUDS3-202ENST00000541280 IL7P13232 177 aa4.19□□□□□ -1.74
SUDS3-202ENST00000541280 ID1P41134 155 aa4.19□□□□□ -1.74
SUDS3-202ENST00000541280 NKX2-1P43699 371 aaPredicted RBP4.19□□□□□ -1.74
SUDS3-202ENST00000541280 DHRS2Q13268 280 aa4.19□□□□□ -1.74
SUDS3-202ENST00000541280 GAMTQ14353 236 aa4.19□□□□□ -1.74
SUDS3-202ENST00000541280 SPATA31B1PQ5VZV4 182 aa4.19□□□□□ -1.74
SUDS3-202ENST00000541280 STHQ8IWL8 128 aa4.19□□□□□ -1.74
SUDS3-202ENST00000541280 MITD1Q8WV92 249 aa4.19□□□□□ -1.74
SUDS3-202ENST00000541280 RNF125Q96EQ8 232 aa4.19□□□□□ -1.74
SUDS3-202ENST00000541280 ACY3Q96HD9 319 aa4.19□□□□□ -1.74
SUDS3-202ENST00000541280 ZNF414Q96IQ9 312 aa4.19□□□□□ -1.74
SUDS3-202ENST00000541280 SMIM8Q96KF7 97 aa4.19□□□□□ -1.74
SUDS3-202ENST00000541280 RAB40CQ96S21 281 aa4.19□□□□□ -1.74
SUDS3-202ENST00000541280 OVOL2Q9BRP0 275 aa4.19□□□□□ -1.74
SUDS3-202ENST00000541280 GGACTQ9BVM4 153 aa4.19□□□□□ -1.74
SUDS3-202ENST00000541280 UBQLN2Q9UHD9 624 aa4.19□□□□□ -1.74
SUDS3-202ENST00000541280 IGHV3-49A0A0A0MS15 119 aa4.18□□□□□ -1.74
SUDS3-202ENST00000541280 K7EQG2 157 aa4.18□□□□□ -1.74
SUDS3-202ENST00000541280 LYRM1O43325 122 aa4.18□□□□□ -1.74
SUDS3-202ENST00000541280 TCRBP04435 133 aa4.18□□□□□ -1.74
SUDS3-202ENST00000541280 TFPI2P48307 235 aa4.18□□□□□ -1.74
SUDS3-202ENST00000541280 MEOX2P50222 304 aa4.18□□□□□ -1.74
SUDS3-202ENST00000541280 DEFB131AP59861 70 aa4.18□□□□□ -1.74
SUDS3-202ENST00000541280 SELENOTP62341 195 aa4.18□□□□□ -1.74
SUDS3-202ENST00000541280 ZNF846Q147U1 533 aa4.18□□□□□ -1.74
SUDS3-202ENST00000541280 SPANXN5Q5MJ07 72 aa4.18□□□□□ -1.74
SUDS3-202ENST00000541280 TMEM144Q7Z5S9 345 aa4.18□□□□□ -1.74
SUDS3-202ENST00000541280 GBGT1Q8N5D6 347 aa4.18□□□□□ -1.74
SUDS3-202ENST00000541280 THAP8Q8NA92 274 aa4.18□□□□□ -1.74
SUDS3-202ENST00000541280 BPIFCQ8NFQ6 507 aa4.18□□□□□ -1.74
SUDS3-202ENST00000541280 OR10P1Q8NGE3 313 aa4.18□□□□□ -1.74
SUDS3-202ENST00000541280 OR4D5Q8NGN0 318 aa4.18□□□□□ -1.74
SUDS3-202ENST00000541280 GPR82Q96P67 336 aa4.18□□□□□ -1.74
SUDS3-202ENST00000541280 SDHCQ99643 169 aaPredicted RBP4.18□□□□□ -1.74
SUDS3-202ENST00000541280 WFDC10AQ9H1F0 79 aa4.18□□□□□ -1.74
SUDS3-202ENST00000541280 NPVFQ9HCQ7 196 aa4.18□□□□□ -1.74
SUDS3-202ENST00000541280 NRN1Q9NPD7 142 aa4.18□□□□□ -1.74
SUDS3-202ENST00000541280 BATF3Q9NR55 127 aa4.18□□□□□ -1.74
SUDS3-202ENST00000541280 PSENENQ9NZ42 101 aa4.18□□□□□ -1.74
SUDS3-202ENST00000541280 MRPL36Q9P0J6 103 aaKnown RBP4.18□□□□□ -1.74
SUDS3-202ENST00000541280 PAIP2BQ9ULR5 123 aaKnown RBP4.18□□□□□ -1.74
SUDS3-202ENST00000541280 CMYA5Q8N3K9 4069 aa4.18□□□□□ -1.74
SUDS3-202ENST00000541280 IGKV3-7A0A075B6H7 116 aa4.17□□□□□ -1.74
SUDS3-202ENST00000541280 IGHV3OR16-13A0A075B7E8 117 aa4.17□□□□□ -1.74
SUDS3-202ENST00000541280 IGHV3-74A0A0B4J1X5 117 aa4.17□□□□□ -1.74
SUDS3-202ENST00000541280 IGHV3-66A0A0C4DH42 116 aa4.17□□□□□ -1.74
SUDS3-202ENST00000541280 LINC00854A0A1B0GVQ3 168 aa4.17□□□□□ -1.74
SUDS3-202ENST00000541280 FAM240BA0A1B0GVZ2 78 aa4.17□□□□□ -1.74
SUDS3-202ENST00000541280 PLA2G10O15496 165 aa4.17□□□□□ -1.74
SUDS3-202ENST00000541280 TSC22D2O75157 780 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms