RNA–Protein interactions for RNA: ENST00000541171.1

LEMD3-203, Transcript of LEM domain containing 3, humanhuman

TSL 2

Gene LEMD3, Length 856 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-203ENST00000541171 VAMP1P23763 118 aa17■□□□□ 0.31
LEMD3-203ENST00000541171 GATA2P23769 480 aaPredicted RBP17■□□□□ 0.31
LEMD3-203ENST00000541171 CNPY1Q3B7I2 92 aa17■□□□□ 0.31
LEMD3-203ENST00000541171 RNF212Q495C1 297 aa17■□□□□ 0.31
LEMD3-203ENST00000541171 IGFL4Q6B9Z1 124 aa17■□□□□ 0.31
LEMD3-203ENST00000541171 WRBO00258 174 aa16.99■□□□□ 0.31
LEMD3-203ENST00000541171 MED6O75586 246 aa16.99■□□□□ 0.31
LEMD3-203ENST00000541171 CFDP00746 253 aaPredicted RBP16.99■□□□□ 0.31
LEMD3-203ENST00000541171 PRM2P04554 102 aa16.99■□□□□ 0.31
LEMD3-203ENST00000541171 SOHLH1Q5JUK2 328 aa16.99■□□□□ 0.31
LEMD3-203ENST00000541171 IGF2BP2-AS1Q96M15 143 aa16.99■□□□□ 0.31
LEMD3-203ENST00000541171 C17orf77Q96MU5 243 aa16.99■□□□□ 0.31
LEMD3-203ENST00000541171 CENPXA8MT69 81 aa16.98■□□□□ 0.31
LEMD3-203ENST00000541171 RPP30P78346 268 aaKnown RBP16.98■□□□□ 0.31
LEMD3-203ENST00000541171 AMTNQ6UX39 209 aa16.98■□□□□ 0.31
LEMD3-203ENST00000541171 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa16.98■□□□□ 0.31
LEMD3-203ENST00000541171 TMEM182Q6ZP80 229 aaPredicted RBP16.98■□□□□ 0.31
LEMD3-203ENST00000541171 BPIFCQ8NFQ6 507 aa16.98■□□□□ 0.31
LEMD3-203ENST00000541171 BATF3Q9NR55 127 aa16.98■□□□□ 0.31
LEMD3-203ENST00000541171 PTTG2Q9NZH5 202 aa16.98■□□□□ 0.31
LEMD3-203ENST00000541171 ZNF705GA8MUZ8 300 aaPredicted RBP16.97■□□□□ 0.31
LEMD3-203ENST00000541171 NDUFB6O95139 128 aa16.97■□□□□ 0.31
LEMD3-203ENST00000541171 UBE2MP61081 183 aaKnown RBP16.97■□□□□ 0.31
LEMD3-203ENST00000541171 FGL1Q08830 312 aa16.97■□□□□ 0.31
LEMD3-203ENST00000541171 SPINK13Q1W4C9 94 aa16.97■□□□□ 0.31
LEMD3-203ENST00000541171 OR1B1Q8NGR6 318 aa16.97■□□□□ 0.31
LEMD3-203ENST00000541171 CIB3Q96Q77 187 aaPredicted RBP16.97■□□□□ 0.31
LEMD3-203ENST00000541171 CCDC32Q9BV29 185 aa16.97■□□□□ 0.31
LEMD3-203ENST00000541171 TMEM147Q9BVK8 224 aa16.97■□□□□ 0.31
LEMD3-203ENST00000541171 M0R2Z0 102 aa16.96■□□□□ 0.31
LEMD3-203ENST00000541171 SYNGR2O43760 224 aa16.96■□□□□ 0.31
LEMD3-203ENST00000541171 SLC25A6P12236 298 aa16.96■□□□□ 0.31
LEMD3-203ENST00000541171 CNN1P51911 297 aaKnown RBP16.96■□□□□ 0.31
LEMD3-203ENST00000541171 AKR1C1Q04828 323 aa16.96■□□□□ 0.31
LEMD3-203ENST00000541171 SPANXN5Q5MJ07 72 aa16.96■□□□□ 0.31
LEMD3-203ENST00000541171 C1orf134Q5TEV5 83 aa16.96■□□□□ 0.31
LEMD3-203ENST00000541171 ZNF575Q86XF7 245 aa16.96■□□□□ 0.31
LEMD3-203ENST00000541171 S100ZQ8WXG8 99 aa16.96■□□□□ 0.31
LEMD3-203ENST00000541171 SLC45A2Q9UMX9 530 aa16.96■□□□□ 0.31
LEMD3-203ENST00000541171 TMED3Q9Y3Q3 217 aa16.96■□□□□ 0.31
LEMD3-203ENST00000541171 A8MTW9 85 aa16.95■□□□□ 0.3
LEMD3-203ENST00000541171 PRSS46E5RG02 174 aa16.95■□□□□ 0.3
LEMD3-203ENST00000541171 DUSP14O95147 198 aaKnown RBP16.95■□□□□ 0.3
LEMD3-203ENST00000541171 HOXB5P09067 269 aa16.95■□□□□ 0.3
LEMD3-203ENST00000541171 RNF182Q8N6D2 247 aa16.95■□□□□ 0.3
LEMD3-203ENST00000541171 LRTM2Q8N967 370 aa16.95■□□□□ 0.3
LEMD3-203ENST00000541171 OR11H7Q8NGC8 314 aa16.95■□□□□ 0.3
LEMD3-203ENST00000541171 OR4D5Q8NGN0 318 aa16.95■□□□□ 0.3
LEMD3-203ENST00000541171 MUC4Q99102 2169 aa16.94■□□□□ 0.3
LEMD3-203ENST00000541171 H3BP45 60 aa16.94■□□□□ 0.3
LEMD3-203ENST00000541171 INSP01308 110 aa16.94■□□□□ 0.3
LEMD3-203ENST00000541171 BTCP35070 178 aa16.94■□□□□ 0.3
LEMD3-203ENST00000541171 ABCA13Q86UQ4 5058 aa16.94■□□□□ 0.3
LEMD3-203ENST00000541171 TRAV8-2A0A0B4J237 113 aa16.93■□□□□ 0.3
LEMD3-203ENST00000541171 SFT2D2O95562 160 aa16.93■□□□□ 0.3
LEMD3-203ENST00000541171 DEFB130BP0DP73 79 aa16.93■□□□□ 0.3
LEMD3-203ENST00000541171 DEFB130AP0DP74 79 aa16.93■□□□□ 0.3
LEMD3-203ENST00000541171 PPP1R1AQ13522 171 aa16.93■□□□□ 0.3
LEMD3-203ENST00000541171 GPR82Q96P67 336 aa16.93■□□□□ 0.3
LEMD3-203ENST00000541171 ATG101Q9BSB4 218 aa16.93■□□□□ 0.3
LEMD3-203ENST00000541171 NACAE9PAV3 2078 aa16.92■□□□□ 0.3
LEMD3-203ENST00000541171 SMCO3A2RU48 225 aa16.92■□□□□ 0.3
LEMD3-203ENST00000541171 CRXO43186 299 aaPredicted RBP16.92■□□□□ 0.3
LEMD3-203ENST00000541171 S100A7P31151 101 aa16.92■□□□□ 0.3
LEMD3-203ENST00000541171 ACOT7LQ6ZUV0 252 aa16.92■□□□□ 0.3
LEMD3-203ENST00000541171 BAP18Q8IXM2 172 aa16.92■□□□□ 0.3
LEMD3-203ENST00000541171 C15orf53Q8NAA6 179 aa16.92■□□□□ 0.3
LEMD3-203ENST00000541171 ZNF738Q8NE65 137 aa16.92■□□□□ 0.3
LEMD3-203ENST00000541171 STRAPQ9Y3F4 350 aaKnown RBP16.92■□□□□ 0.3
LEMD3-203ENST00000541171 TRAV12-2A0A075B6T6 113 aa16.91■□□□□ 0.3
LEMD3-203ENST00000541171 LINC00854A0A1B0GVQ3 168 aa16.91■□□□□ 0.3
LEMD3-203ENST00000541171 LYRM9A8MSI8 78 aa16.91■□□□□ 0.3
LEMD3-203ENST00000541171 FCN2Q15485 313 aa16.91■□□□□ 0.3
LEMD3-203ENST00000541171 SLC25A39Q9BZJ4 359 aaPredicted RBP16.91■□□□□ 0.3
LEMD3-203ENST00000541171 PLA2G10O15496 165 aa16.9■□□□□ 0.3
LEMD3-203ENST00000541171 LYRM1O43325 122 aa16.9■□□□□ 0.3
LEMD3-203ENST00000541171 AZU1P20160 251 aa16.9■□□□□ 0.3
LEMD3-203ENST00000541171 F5H768 121 aa16.89■□□□□ 0.29
LEMD3-203ENST00000541171 H3BRN7 92 aa16.89■□□□□ 0.29
LEMD3-203ENST00000541171 NUDT3O95989 172 aa16.89■□□□□ 0.29
LEMD3-203ENST00000541171 IL5P05113 134 aa16.89■□□□□ 0.29
LEMD3-203ENST00000541171 PRB4P10163 310 aaPredicted RBP16.89■□□□□ 0.29
LEMD3-203ENST00000541171 RHOBP62745 196 aa16.89■□□□□ 0.29
LEMD3-203ENST00000541171 CYP2G1PQ6ZSU1 146 aa16.89■□□□□ 0.29
LEMD3-203ENST00000541171 TMEM144Q7Z5S9 345 aa16.89■□□□□ 0.29
LEMD3-203ENST00000541171 RAP2BP61225 183 aa16.88■□□□□ 0.29
LEMD3-203ENST00000541171 B2MP61769 119 aa16.88■□□□□ 0.29
LEMD3-203ENST00000541171 HIST1H1AQ02539 215 aaPredicted RBP16.88■□□□□ 0.29
LEMD3-203ENST00000541171 LINC01587Q99440 93 aa16.88■□□□□ 0.29
LEMD3-203ENST00000541171 SHANK2-AS3Q9BTD1 123 aa16.88■□□□□ 0.29
LEMD3-203ENST00000541171 PPP1R14DQ9NXH3 145 aa16.88■□□□□ 0.29
LEMD3-203ENST00000541171 HIGD1AQ9Y241 93 aa16.88■□□□□ 0.29
LEMD3-203ENST00000541171 BOLA2-SMG1P6H3BVE0 249 aa16.87■□□□□ 0.29
LEMD3-203ENST00000541171 OR5G3P0C626 314 aa16.87■□□□□ 0.29
LEMD3-203ENST00000541171 FAM3BP58499 235 aaPredicted RBP16.87■□□□□ 0.29
LEMD3-203ENST00000541171 POLR2GP62487 172 aaKnown RBP eCLIP16.87■□□□□ 0.29
LEMD3-203ENST00000541171 PSENENQ9NZ42 101 aa16.87■□□□□ 0.29
LEMD3-203ENST00000541171 FLVCR2Q9UPI3 526 aa16.87■□□□□ 0.29
LEMD3-203ENST00000541171 C9orf170A2RU37 121 aa16.86■□□□□ 0.29
LEMD3-203ENST00000541171 HYPMO75409 117 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms