RNA–Protein interactions for RNA: ENST00000540960.1

CHD4-208, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 5

Gene CHD4, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-208ENST00000540960 IGKV1OR2-108A0A075B7D4 117 aa6.51□□□□□ -1.37
CHD4-208ENST00000540960 A0A0G2JLM5 398 aa6.51□□□□□ -1.37
CHD4-208ENST00000540960 FBLL1A6NHQ2 334 aaKnown RBP6.51□□□□□ -1.37
CHD4-208ENST00000540960 C9JCJ5 164 aa6.51□□□□□ -1.37
CHD4-208ENST00000540960 K7EIM0 57 aa6.51□□□□□ -1.37
CHD4-208ENST00000540960 AP4M1O00189 453 aa6.51□□□□□ -1.37
CHD4-208ENST00000540960 TSPAN4O14817 238 aa6.51□□□□□ -1.37
CHD4-208ENST00000540960 OR2C1O95371 312 aa6.51□□□□□ -1.37
CHD4-208ENST00000540960 IGF1P05019 195 aa6.51□□□□□ -1.37
CHD4-208ENST00000540960 ORM2P19652 201 aa6.51□□□□□ -1.37
CHD4-208ENST00000540960 CD81P60033 236 aa6.51□□□□□ -1.37
CHD4-208ENST00000540960 UBE2L3P68036 154 aaKnown RBP6.51□□□□□ -1.37
CHD4-208ENST00000540960 PRB3Q04118 309 aaPredicted RBP6.51□□□□□ -1.37
CHD4-208ENST00000540960 RELQ04864 619 aaPredicted RBP6.51□□□□□ -1.37
CHD4-208ENST00000540960 TIGITQ495A1 244 aa6.51□□□□□ -1.37
CHD4-208ENST00000540960 RNF212Q495C1 297 aa6.51□□□□□ -1.37
CHD4-208ENST00000540960 Q56UQ5 140 aa6.51□□□□□ -1.37
CHD4-208ENST00000540960 LINC00305Q7Z4B0 112 aa6.51□□□□□ -1.37
CHD4-208ENST00000540960 BPIFA4PQ86YQ2 179 aa6.51□□□□□ -1.37
CHD4-208ENST00000540960 DYNAPQ8N1N2 210 aa6.51□□□□□ -1.37
CHD4-208ENST00000540960 LYPD1Q8N2G4 141 aa6.51□□□□□ -1.37
CHD4-208ENST00000540960 OR4F17Q8NGA8 305 aa6.51□□□□□ -1.37
CHD4-208ENST00000540960 OR1B1Q8NGR6 318 aa6.51□□□□□ -1.37
CHD4-208ENST00000540960 SMIM12Q96EX1 92 aa6.51□□□□□ -1.37
CHD4-208ENST00000540960 GPR82Q96P67 336 aa6.51□□□□□ -1.37
CHD4-208ENST00000540960 CHRDL1Q9BU40 450 aa6.51□□□□□ -1.37
CHD4-208ENST00000540960 SDF2L1Q9HCN8 221 aa6.51□□□□□ -1.37
CHD4-208ENST00000540960 FBXL7Q9UJT9 491 aa6.51□□□□□ -1.37
CHD4-208ENST00000540960 HUWE1Q7Z6Z7 4374 aaKnown RBP6.51□□□□□ -1.37
CHD4-208ENST00000540960 IGKV1D-37A0A075B6S9 117 aa6.5□□□□□ -1.37
CHD4-208ENST00000540960 TRAV41A0A0B4J266 112 aa6.5□□□□□ -1.37
CHD4-208ENST00000540960 A0A0U1RQK1 487 aa6.5□□□□□ -1.37
CHD4-208ENST00000540960 SERTM2A0A1B0GWG4 89 aa6.5□□□□□ -1.37
CHD4-208ENST00000540960 A6NDX4 124 aa6.5□□□□□ -1.37
CHD4-208ENST00000540960 K7EQM0 130 aa6.5□□□□□ -1.37
CHD4-208ENST00000540960 DNASE2O00115 360 aaPredicted RBP6.5□□□□□ -1.37
CHD4-208ENST00000540960 BMPR1BO00238 502 aa6.5□□□□□ -1.37
CHD4-208ENST00000540960 MFAP2P55001 183 aa6.5□□□□□ -1.37
CHD4-208ENST00000540960 TAS2R60P59551 318 aa6.5□□□□□ -1.37
CHD4-208ENST00000540960 SSBP2P81877 361 aaPredicted RBP6.5□□□□□ -1.37
CHD4-208ENST00000540960 ATP5G2Q06055 141 aa6.5□□□□□ -1.37
CHD4-208ENST00000540960 GCSAMLQ5JQS6 135 aa6.5□□□□□ -1.37
CHD4-208ENST00000540960 FAM90A2PQ658T7 463 aa6.5□□□□□ -1.37
CHD4-208ENST00000540960 KCNIP4Q6PIL6 250 aa6.5□□□□□ -1.37
CHD4-208ENST00000540960 MIR17HGQ75NE6 70 aa6.5□□□□□ -1.37
CHD4-208ENST00000540960 SSX7Q7RTT5 188 aa6.5□□□□□ -1.37
CHD4-208ENST00000540960 OR5AU1Q8NGC0 362 aa6.5□□□□□ -1.37
CHD4-208ENST00000540960 TMEM37Q8WXS4 190 aa6.5□□□□□ -1.37
CHD4-208ENST00000540960 IMMP2LQ96T52 175 aa6.5□□□□□ -1.37
CHD4-208ENST00000540960 PARLQ9H300 379 aa6.5□□□□□ -1.37
CHD4-208ENST00000540960 C16orf95Q9H693 158 aa6.5□□□□□ -1.37
CHD4-208ENST00000540960 ZNF355PQ9NSJ1 428 aa6.5□□□□□ -1.37
CHD4-208ENST00000540960 CLEC5AQ9NY25 188 aa6.5□□□□□ -1.37
CHD4-208ENST00000540960 TRBV9A0A0B4J1U6 114 aa6.49□□□□□ -1.37
CHD4-208ENST00000540960 PSMB11A5LHX3 300 aa6.49□□□□□ -1.37
CHD4-208ENST00000540960 HELTA6NFD8 242 aa6.49□□□□□ -1.37
CHD4-208ENST00000540960 IGHG2P01859 326 aa6.49□□□□□ -1.37
CHD4-208ENST00000540960 HIST1H1EP10412 219 aaKnown RBP6.49□□□□□ -1.37
CHD4-208ENST00000540960 PSG1P11464 419 aa6.49□□□□□ -1.37
CHD4-208ENST00000540960 RPL7P18124 248 aaKnown RBP6.49□□□□□ -1.37
CHD4-208ENST00000540960 CD24P25063 80 aa6.49□□□□□ -1.37
CHD4-208ENST00000540960 HOXD3P31249 432 aaPredicted RBP6.49□□□□□ -1.37
CHD4-208ENST00000540960 BMI1P35226 326 aa6.49□□□□□ -1.37
CHD4-208ENST00000540960 CNN1P51911 297 aaKnown RBP6.49□□□□□ -1.37
CHD4-208ENST00000540960 LYZP61626 148 aa6.49□□□□□ -1.37
CHD4-208ENST00000540960 ZNF90Q03938 601 aa6.49□□□□□ -1.37
CHD4-208ENST00000540960 PDE6HQ13956 83 aa6.49□□□□□ -1.37
CHD4-208ENST00000540960 MLANAQ16655 118 aa6.49□□□□□ -1.37
CHD4-208ENST00000540960 ZNF674Q2M3X9 581 aa6.49□□□□□ -1.37
CHD4-208ENST00000540960 NSUN5P1Q3KNT7 163 aa6.49□□□□□ -1.37
CHD4-208ENST00000540960 ZNF600Q6ZNG1 722 aa6.49□□□□□ -1.37
CHD4-208ENST00000540960 TMEM86BQ8N661 226 aa6.49□□□□□ -1.37
CHD4-208ENST00000540960 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.49□□□□□ -1.37
CHD4-208ENST00000540960 RNF125Q96EQ8 232 aa6.49□□□□□ -1.37
CHD4-208ENST00000540960 FANCD2OSQ96PS1 177 aa6.49□□□□□ -1.37
CHD4-208ENST00000540960 SHANK2-AS3Q9BTD1 123 aa6.49□□□□□ -1.37
CHD4-208ENST00000540960 TMPRSS5Q9H3S3 457 aa6.49□□□□□ -1.37
CHD4-208ENST00000540960 MRPL27Q9P0M9 148 aaKnown RBP6.49□□□□□ -1.37
CHD4-208ENST00000540960 TRAV9-1A0A075B6T8 112 aa6.48□□□□□ -1.37
CHD4-208ENST00000540960 H3BUX3 64 aa6.48□□□□□ -1.37
CHD4-208ENST00000540960 H7BYZ3 331 aa6.48□□□□□ -1.37
CHD4-208ENST00000540960 ATP6V0E1O15342 81 aa6.48□□□□□ -1.37
CHD4-208ENST00000540960 SCO1O75880 301 aa6.48□□□□□ -1.37
CHD4-208ENST00000540960 NDUFB4O95168 129 aa6.48□□□□□ -1.37
CHD4-208ENST00000540960 IGKV1-17P01599 117 aa6.48□□□□□ -1.37
CHD4-208ENST00000540960 NBEAP1P0C6P0 100 aa6.48□□□□□ -1.37
CHD4-208ENST00000540960 FOLR2P14207 255 aa6.48□□□□□ -1.37
CHD4-208ENST00000540960 GNG4P50150 75 aa6.48□□□□□ -1.37
CHD4-208ENST00000540960 UBE2G2P60604 165 aa6.48□□□□□ -1.37
CHD4-208ENST00000540960 RAB5BP61020 215 aa6.48□□□□□ -1.37
CHD4-208ENST00000540960 SLC35B1P78383 322 aa6.48□□□□□ -1.37
CHD4-208ENST00000540960 RHOGP84095 191 aa6.48□□□□□ -1.37
CHD4-208ENST00000540960 PSG9Q00887 426 aa6.48□□□□□ -1.37
CHD4-208ENST00000540960 ADIRFQ15847 76 aa6.48□□□□□ -1.37
CHD4-208ENST00000540960 ECSCRQ19T08 205 aa6.48□□□□□ -1.37
CHD4-208ENST00000540960 C1orf194Q5T5A4 169 aa6.48□□□□□ -1.37
CHD4-208ENST00000540960 ATRAIDQ6UW56 229 aa6.48□□□□□ -1.37
CHD4-208ENST00000540960 C5orf17Q8NAS9 161 aa6.48□□□□□ -1.37
CHD4-208ENST00000540960 OR5T1Q8NG75 326 aa6.48□□□□□ -1.37
CHD4-208ENST00000540960 CMTM2Q8TAZ6 248 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms