RNA–Protein interactions for RNA: ENST00000540608.5

NPC1-202, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 2,790 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-202ENST00000540608 Q6ZVH6 145 aa9.77□□□□□ -0.84
NPC1-202ENST00000540608 INSIG2Q9Y5U4 225 aa9.77□□□□□ -0.84
NPC1-202ENST00000540608 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.77□□□□□ -0.85
NPC1-202ENST00000540608 IGLV1-47P01700 117 aa9.77□□□□□ -0.85
NPC1-202ENST00000540608 PRNTQ86SH4 94 aa9.77□□□□□ -0.85
NPC1-202ENST00000540608 EXOC3-AS1Q8N2X6 119 aa9.77□□□□□ -0.85
NPC1-202ENST00000540608 TMEM190Q8WZ59 177 aa9.77□□□□□ -0.85
NPC1-202ENST00000540608 PKDREJQ9NTG1 2253 aa9.77□□□□□ -0.85
NPC1-202ENST00000540608 IGHV1-3A0A0C4DH29 117 aa9.76□□□□□ -0.85
NPC1-202ENST00000540608 OVOL3O00110 214 aa9.76□□□□□ -0.85
NPC1-202ENST00000540608 RBPJQ06330 500 aa9.76□□□□□ -0.85
NPC1-202ENST00000540608 ACACAQ13085 2346 aa9.76□□□□□ -0.85
NPC1-202ENST00000540608 GOLT1AQ6ZVE7 132 aa9.76□□□□□ -0.85
NPC1-202ENST00000540608 Q8NA96 180 aa9.76□□□□□ -0.85
NPC1-202ENST00000540608 TMEM191AQ9H0A3 160 aa9.76□□□□□ -0.85
NPC1-202ENST00000540608 I3L2K1 104 aa9.76□□□□□ -0.85
NPC1-202ENST00000540608 PET117Q6UWS5 81 aa9.76□□□□□ -0.85
NPC1-202ENST00000540608 MAP1LC3CQ9BXW4 147 aa9.76□□□□□ -0.85
NPC1-202ENST00000540608 JKAMPQ9P055 326 aa9.76□□□□□ -0.85
NPC1-202ENST00000540608 hDV102S1A0JD36 115 aa9.75□□□□□ -0.85
NPC1-202ENST00000540608 ZNF785A8K8V0 405 aa9.75□□□□□ -0.85
NPC1-202ENST00000540608 BUB1B-PAK6H3BSN5 160 aa9.75□□□□□ -0.85
NPC1-202ENST00000540608 RASL11BQ9BPW5 248 aa9.75□□□□□ -0.85
NPC1-202ENST00000540608 DYNLRB1Q9NP97 96 aa9.75□□□□□ -0.85
NPC1-202ENST00000540608 HSPB8Q9UJY1 196 aa9.75□□□□□ -0.85
NPC1-202ENST00000540608 RALYQ9UKM9 306 aaKnown RBP9.75□□□□□ -0.85
NPC1-202ENST00000540608 A0A1B0GUT8 65 aa9.75□□□□□ -0.85
NPC1-202ENST00000540608 RBP4P02753 201 aa9.75□□□□□ -0.85
NPC1-202ENST00000540608 ZNF138P52744 262 aa9.75□□□□□ -0.85
NPC1-202ENST00000540608 GFRALQ6UXV0 394 aa9.75□□□□□ -0.85
NPC1-202ENST00000540608 SRSF12Q8WXF0 261 aaKnown RBP9.75□□□□□ -0.85
NPC1-202ENST00000540608 TMUB1Q9BVT8 246 aa9.75□□□□□ -0.85
NPC1-202ENST00000540608 NGBQ9NPG2 151 aa9.75□□□□□ -0.85
NPC1-202ENST00000540608 RNF24Q9Y225 148 aa9.75□□□□□ -0.85
NPC1-202ENST00000540608 HSBP1L1C9JCN9 74 aa9.74□□□□□ -0.85
NPC1-202ENST00000540608 HTR1DP28221 377 aa9.74□□□□□ -0.85
NPC1-202ENST00000540608 DLX1P56177 255 aa9.74□□□□□ -0.85
NPC1-202ENST00000540608 SLC25A34Q6PIV7 304 aa9.74□□□□□ -0.85
NPC1-202ENST00000540608 TMEM75Q8N9X5 138 aa9.74□□□□□ -0.85
NPC1-202ENST00000540608 GATD1Q8NB37 220 aa9.74□□□□□ -0.85
NPC1-202ENST00000540608 FBXL15Q9H469 300 aa9.74□□□□□ -0.85
NPC1-202ENST00000540608 TRBV19A0A075B6N1 114 aa9.74□□□□□ -0.85
NPC1-202ENST00000540608 SHISA9B4DS77 424 aa9.74□□□□□ -0.85
NPC1-202ENST00000540608 E7EQL1 145 aa9.74□□□□□ -0.85
NPC1-202ENST00000540608 IGKV1-17P01599 117 aa9.74□□□□□ -0.85
NPC1-202ENST00000540608 RIGQ13278 110 aa9.74□□□□□ -0.85
NPC1-202ENST00000540608 PRR30Q53SZ7 412 aaPredicted RBP9.74□□□□□ -0.85
NPC1-202ENST00000540608 MPV17L2Q567V2 206 aa9.74□□□□□ -0.85
NPC1-202ENST00000540608 NEU4Q8WWR8 484 aaPredicted RBP9.74□□□□□ -0.85
NPC1-202ENST00000540608 ZC2HC1AQ96GY0 325 aa9.74□□□□□ -0.85
NPC1-202ENST00000540608 SRSF8Q9BRL6 282 aaKnown RBP9.74□□□□□ -0.85
NPC1-202ENST00000540608 SCNM1Q9BWG6 230 aa9.74□□□□□ -0.85
NPC1-202ENST00000540608 SPTBN2O15020 2390 aa9.73□□□□□ -0.85
NPC1-202ENST00000540608 TOX4O94842 621 aa9.73□□□□□ -0.85
NPC1-202ENST00000540608 Q71RC1 249 aaPredicted RBP9.73□□□□□ -0.85
NPC1-202ENST00000540608 RNF5Q99942 180 aa9.73□□□□□ -0.85
NPC1-202ENST00000540608 SHANK2-AS3Q9BTD1 123 aa9.73□□□□□ -0.85
NPC1-202ENST00000540608 MS4A6AQ9H2W1 248 aa9.73□□□□□ -0.85
NPC1-202ENST00000540608 SCRT2Q9NQ03 307 aa9.73□□□□□ -0.85
NPC1-202ENST00000540608 IGHV2-70DA0A0C4DH43 119 aa9.73□□□□□ -0.85
NPC1-202ENST00000540608 A0A1B0GW15 77 aa9.73□□□□□ -0.85
NPC1-202ENST00000540608 PRB3Q04118 309 aaPredicted RBP9.73□□□□□ -0.85
NPC1-202ENST00000540608 FBLN7Q53RD9 439 aa9.73□□□□□ -0.85
NPC1-202ENST00000540608 BPIFA4PQ86YQ2 179 aa9.73□□□□□ -0.85
NPC1-202ENST00000540608 LYPD1Q8N2G4 141 aa9.73□□□□□ -0.85
NPC1-202ENST00000540608 TP73-AS1Q9UF72 201 aa9.73□□□□□ -0.85
NPC1-202ENST00000540608 K7EP13 123 aa9.72□□□□□ -0.85
NPC1-202ENST00000540608 ARMS2P0C7Q2 107 aa9.72□□□□□ -0.85
NPC1-202ENST00000540608 C17orf77Q96MU5 243 aa9.72□□□□□ -0.85
NPC1-202ENST00000540608 PSG8Q9UQ74 426 aa9.72□□□□□ -0.85
NPC1-202ENST00000540608 APC2O95996 2303 aa9.72□□□□□ -0.85
NPC1-202ENST00000540608 H3BRN7 92 aa9.72□□□□□ -0.85
NPC1-202ENST00000540608 K7EQM0 130 aa9.72□□□□□ -0.85
NPC1-202ENST00000540608 NUDT3O95989 172 aa9.72□□□□□ -0.85
NPC1-202ENST00000540608 BVES-AS1Q5T3Y7 98 aa9.72□□□□□ -0.85
NPC1-202ENST00000540608 SIGLEC15Q6ZMC9 328 aa9.72□□□□□ -0.85
NPC1-202ENST00000540608 RPEQ96AT9 228 aa9.72□□□□□ -0.85
NPC1-202ENST00000540608 TACC2O95359 2948 aa9.71□□□□□ -0.85
NPC1-202ENST00000540608 HLA-DRB1P01911 266 aa9.71□□□□□ -0.85
NPC1-202ENST00000540608 CSN3P07498 182 aa9.71□□□□□ -0.85
NPC1-202ENST00000540608 PSG3Q16557 428 aa9.71□□□□□ -0.85
NPC1-202ENST00000540608 LINC01545Q5VT33 79 aa9.71□□□□□ -0.85
NPC1-202ENST00000540608 ZZEF1O43149 2961 aa9.71□□□□□ -0.85
NPC1-202ENST00000540608 LOC105371242A0A075B767 164 aa9.71□□□□□ -0.86
NPC1-202ENST00000540608 LY6LH3BQJ8 138 aa9.71□□□□□ -0.86
NPC1-202ENST00000540608 K7EIM0 57 aa9.71□□□□□ -0.86
NPC1-202ENST00000540608 C12orf54Q6X4T0 127 aa9.71□□□□□ -0.86
NPC1-202ENST00000540608 RNASE8Q8TDE3 154 aaKnown RBP9.71□□□□□ -0.86
NPC1-202ENST00000540608 AP5S1Q9NUS5 200 aa9.71□□□□□ -0.86
NPC1-202ENST00000540608 MALRD1Q5VYJ5 2156 aa9.7□□□□□ -0.86
NPC1-202ENST00000540608 TRAV30A0A087WSZ9 112 aa9.7□□□□□ -0.86
NPC1-202ENST00000540608 APOBEC3AP31941 199 aaPredicted RBP9.7□□□□□ -0.86
NPC1-202ENST00000540608 CRIP1P50238 77 aa9.7□□□□□ -0.86
NPC1-202ENST00000540608 PLGLAQ15195 96 aa9.7□□□□□ -0.86
NPC1-202ENST00000540608 Q6AWC8 147 aa9.7□□□□□ -0.86
NPC1-202ENST00000540608 ZNF491Q8N8L2 437 aa9.7□□□□□ -0.86
NPC1-202ENST00000540608 MCRIP2Q9BUT9 160 aaKnown RBP9.7□□□□□ -0.86
NPC1-202ENST00000540608 TAX1BP3O14907 124 aa9.7□□□□□ -0.86
NPC1-202ENST00000540608 CNIH1O95406 144 aa9.7□□□□□ -0.86
NPC1-202ENST00000540608 COX7A1P24310 79 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms