RNA–Protein interactions for RNA: ENST00000540166.5

DDB1-217, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 3,906 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-217ENST00000540166 SS18L1O75177 396 aaPredicted RBP7.07□□□□□ -1.28
DDB1-217ENST00000540166 CACNG7P62955 275 aa7.07□□□□□ -1.28
DDB1-217ENST00000540166 RBPMS2Q6ZRY4 209 aaKnown RBP7.07□□□□□ -1.28
DDB1-217ENST00000540166 MED12LQ86YW9 2145 aa7.07□□□□□ -1.28
DDB1-217ENST00000540166 BCL6BQ8N143 479 aaPredicted RBP7.07□□□□□ -1.28
DDB1-217ENST00000540166 SPINK8P0C7L1 97 aa7.06□□□□□ -1.28
DDB1-217ENST00000540166 HSPE1P61604 102 aaKnown RBP7.06□□□□□ -1.28
DDB1-217ENST00000540166 GAGE13Q4V321 117 aa7.06□□□□□ -1.28
DDB1-217ENST00000540166 FOXC2Q99958 501 aa7.06□□□□□ -1.28
DDB1-217ENST00000540166 RNF223E7ERA6 249 aa7.06□□□□□ -1.28
DDB1-217ENST00000540166 PLAUP00749 431 aa7.06□□□□□ -1.28
DDB1-217ENST00000540166 CT45A10P0DMU9 189 aa7.06□□□□□ -1.28
DDB1-217ENST00000540166 ORM2P19652 201 aa7.06□□□□□ -1.28
DDB1-217ENST00000540166 LINC00205P59089 165 aa7.06□□□□□ -1.28
DDB1-217ENST00000540166 WIPF2Q8TF74 440 aaPredicted RBP7.06□□□□□ -1.28
DDB1-217ENST00000540166 FLYWCH2Q96CP2 140 aaKnown RBP7.06□□□□□ -1.28
DDB1-217ENST00000540166 MRPL16Q9NX20 251 aaKnown RBP7.06□□□□□ -1.28
DDB1-217ENST00000540166 KIAA1549Q9HCM3 1950 aa7.06□□□□□ -1.28
DDB1-217ENST00000540166 WNT9BO14905 357 aa7.06□□□□□ -1.28
DDB1-217ENST00000540166 APOMO95445 188 aa7.06□□□□□ -1.28
DDB1-217ENST00000540166 DSCR9P59020 149 aa7.06□□□□□ -1.28
DDB1-217ENST00000540166 ZNF479Q96JC4 524 aa7.06□□□□□ -1.28
DDB1-217ENST00000540166 GGTLC3B5MD39 225 aa7.05□□□□□ -1.28
DDB1-217ENST00000540166 CNIH1O95406 144 aa7.05□□□□□ -1.28
DDB1-217ENST00000540166 COLCA1Q6ZS62 124 aa7.05□□□□□ -1.28
DDB1-217ENST00000540166 HES4Q9HCC6 221 aa7.05□□□□□ -1.28
DDB1-217ENST00000540166 RAB9BQ9NP90 201 aa7.05□□□□□ -1.28
DDB1-217ENST00000540166 IDI2-AS1Q9NZ38 188 aa7.05□□□□□ -1.28
DDB1-217ENST00000540166 UNC79Q9P2D8 2635 aa7.05□□□□□ -1.28
DDB1-217ENST00000540166 OR2J3O76001 311 aa7.05□□□□□ -1.28
DDB1-217ENST00000540166 KIR2DS2P43631 304 aa7.05□□□□□ -1.28
DDB1-217ENST00000540166 CDSNQ15517 529 aa7.05□□□□□ -1.28
DDB1-217ENST00000540166 VGLL1Q99990 258 aa7.05□□□□□ -1.28
DDB1-217ENST00000540166 MRPL32Q9BYC8 188 aaKnown RBP7.05□□□□□ -1.28
DDB1-217ENST00000540166 LINC00470Q9BZP3 86 aa7.05□□□□□ -1.28
DDB1-217ENST00000540166 FGF23Q9GZV9 251 aaPredicted RBP7.05□□□□□ -1.28
DDB1-217ENST00000540166 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.05□□□□□ -1.28
DDB1-217ENST00000540166 TGFAP01135 160 aa7.05□□□□□ -1.28
DDB1-217ENST00000540166 TFF1P04155 84 aa7.05□□□□□ -1.28
DDB1-217ENST00000540166 FBXL19-AS1Q494R0 122 aa7.05□□□□□ -1.28
DDB1-217ENST00000540166 GPR82Q96P67 336 aa7.05□□□□□ -1.28
DDB1-217ENST00000540166 PRR14LQ5THK1 2151 aa7.04□□□□□ -1.28
DDB1-217ENST00000540166 SUB1P53999 127 aaKnown RBP eCLIP7.04□□□□□ -1.281e-6■■■■■ 30.7
DDB1-217ENST00000540166 ALKBH6Q3KRA9 238 aa7.04□□□□□ -1.28
DDB1-217ENST00000540166 NRN1LQ496H8 165 aa7.04□□□□□ -1.28
DDB1-217ENST00000540166 FAM53AQ6NSI3 398 aaPredicted RBP7.04□□□□□ -1.28
DDB1-217ENST00000540166 NEGR1Q7Z3B1 354 aa7.04□□□□□ -1.28
DDB1-217ENST00000540166 TEX29Q8N6K0 151 aa7.04□□□□□ -1.28
DDB1-217ENST00000540166 TEX45Q8NA69 505 aa7.04□□□□□ -1.28
DDB1-217ENST00000540166 HIST1H4GQ99525 98 aa7.04□□□□□ -1.28
DDB1-217ENST00000540166 ABCA1O95477 2261 aa7.04□□□□□ -1.28
DDB1-217ENST00000540166 ANKRD17O75179 2603 aaKnown RBP7.04□□□□□ -1.28
DDB1-217ENST00000540166 F8W1H4 67 aa7.04□□□□□ -1.28
DDB1-217ENST00000540166 SCGB2A1O75556 95 aa7.04□□□□□ -1.28
DDB1-217ENST00000540166 CD40P25942 277 aa7.04□□□□□ -1.28
DDB1-217ENST00000540166 GNG5P63218 68 aa7.04□□□□□ -1.28
DDB1-217ENST00000540166 LRRC29Q8WV35 223 aa7.04□□□□□ -1.28
DDB1-217ENST00000540166 PRNDQ9UKY0 176 aa7.04□□□□□ -1.28
DDB1-217ENST00000540166 LINC00473A8K010 186 aa7.04□□□□□ -1.28
DDB1-217ENST00000540166 PYYP10082 97 aa7.04□□□□□ -1.28
DDB1-217ENST00000540166 PRSS57Q6UWY2 283 aa7.04□□□□□ -1.28
DDB1-217ENST00000540166 MAPK1IP1LQ8NDC0 245 aa7.04□□□□□ -1.28
DDB1-217ENST00000540166 JMJD8Q96S16 334 aa7.04□□□□□ -1.28
DDB1-217ENST00000540166 LOC107984156A0A0G2JMH3 177 aa7.03□□□□□ -1.28
DDB1-217ENST00000540166 A0A1B0GUT8 65 aa7.03□□□□□ -1.28
DDB1-217ENST00000540166 ERVK11-1P61568 191 aa7.03□□□□□ -1.28
DDB1-217ENST00000540166 ARL17AQ8IVW1 177 aa7.03□□□□□ -1.28
DDB1-217ENST00000540166 WFDC11Q8NEX6 87 aa7.03□□□□□ -1.28
DDB1-217ENST00000540166 SRSF12Q8WXF0 261 aaKnown RBP7.03□□□□□ -1.28
DDB1-217ENST00000540166 SS18L2Q9UHA2 77 aa7.03□□□□□ -1.28
DDB1-217ENST00000540166 TRAV5A0A0B4J249 113 aa7.03□□□□□ -1.28
DDB1-217ENST00000540166 ZNF503-AS2A6NEH8 195 aa7.03□□□□□ -1.28
DDB1-217ENST00000540166 FAM231DQ6ZW35 169 aa7.03□□□□□ -1.28
DDB1-217ENST00000540166 WFDC3Q8IUB2 231 aa7.03□□□□□ -1.28
DDB1-217ENST00000540166 DEFB108BQ8NET1 73 aa7.03□□□□□ -1.28
DDB1-217ENST00000540166 DCTN5Q9BTE1 182 aa7.03□□□□□ -1.28
DDB1-217ENST00000540166 C1RLQ9NZP8 487 aa7.03□□□□□ -1.28
DDB1-217ENST00000540166 PSPNO60542 156 aa7.03□□□□□ -1.28
DDB1-217ENST00000540166 FCGR2BP31994 310 aaPredicted RBP7.03□□□□□ -1.28
DDB1-217ENST00000540166 UFSP1Q6NVU6 142 aa7.03□□□□□ -1.28
DDB1-217ENST00000540166 Q6P435 159 aa7.03□□□□□ -1.28
DDB1-217ENST00000540166 SH2D6Q7Z4S9 175 aa7.03□□□□□ -1.28
DDB1-217ENST00000540166 PRNTQ86SH4 94 aa7.03□□□□□ -1.28
DDB1-217ENST00000540166 ARPC1AQ92747 370 aa7.03□□□□□ -1.28
DDB1-217ENST00000540166 C18orf15Q96N68 181 aa7.03□□□□□ -1.28
DDB1-217ENST00000540166 LSM4Q9Y4Z0 139 aaKnown RBP7.03□□□□□ -1.28
DDB1-217ENST00000540166 FLNCQ14315 2725 aa7.02□□□□□ -1.29
DDB1-217ENST00000540166 B9A039 149 aa7.02□□□□□ -1.29
DDB1-217ENST00000540166 H3BVH4 76 aa7.02□□□□□ -1.29
DDB1-217ENST00000540166 IGLV2-14P01704 120 aa7.02□□□□□ -1.29
DDB1-217ENST00000540166 SEM1Q6ZVN7 128 aa7.02□□□□□ -1.29
DDB1-217ENST00000540166 hADV38S2A0JD32 116 aa7.02□□□□□ -1.29
DDB1-217ENST00000540166 H3BMG7 143 aa7.02□□□□□ -1.29
DDB1-217ENST00000540166 VDAC2P45880 294 aaPredicted RBP7.02□□□□□ -1.29
DDB1-217ENST00000540166 WFDC2Q14508 124 aa7.02□□□□□ -1.29
DDB1-217ENST00000540166 RPL39P5Q59GN2 51 aa7.02□□□□□ -1.29
DDB1-217ENST00000540166 LYRM7Q5U5X0 104 aa7.02□□□□□ -1.29
DDB1-217ENST00000540166 SLC35E4Q6ICL7 350 aa7.02□□□□□ -1.29
DDB1-217ENST00000540166 TTC9CQ8N5M4 171 aa7.02□□□□□ -1.29
DDB1-217ENST00000540166 SLC25A33Q9BSK2 321 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 99.9 ms