RNA–Protein interactions for RNA: ENST00000539548.6

CDH13-204, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 2,199 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-204ENST00000539548 IGLV1-47P01700 117 aa7.68□□□□□ -1.18
CDH13-204ENST00000539548 APELAP0DMC3 54 aa7.68□□□□□ -1.18
CDH13-204ENST00000539548 LYZP61626 148 aa7.68□□□□□ -1.18
CDH13-204ENST00000539548 GOLT1AQ6ZVE7 132 aa7.68□□□□□ -1.18
CDH13-204ENST00000539548 PRNTQ86SH4 94 aa7.68□□□□□ -1.18
CDH13-204ENST00000539548 PPP1R27Q86WC6 154 aa7.68□□□□□ -1.18
CDH13-204ENST00000539548 RNASE8Q8TDE3 154 aaKnown RBP7.68□□□□□ -1.18
CDH13-204ENST00000539548 NEU4Q8WWR8 484 aaPredicted RBP7.68□□□□□ -1.18
CDH13-204ENST00000539548 RNASE6Q93091 150 aaKnown RBP7.68□□□□□ -1.18
CDH13-204ENST00000539548 TMUB1Q9BVT8 246 aa7.68□□□□□ -1.18
CDH13-204ENST00000539548 SCRT2Q9NQ03 307 aa7.68□□□□□ -1.18
CDH13-204ENST00000539548 Q9UFV3 132 aa7.68□□□□□ -1.18
CDH13-204ENST00000539548 TRAV30A0A087WSZ9 112 aa7.67□□□□□ -1.18
CDH13-204ENST00000539548 A0A1B0GUT8 65 aa7.67□□□□□ -1.18
CDH13-204ENST00000539548 A0A1B0GW15 77 aa7.67□□□□□ -1.18
CDH13-204ENST00000539548 HLA-DRB1P01911 266 aa7.67□□□□□ -1.18
CDH13-204ENST00000539548 PCP4P48539 62 aa7.67□□□□□ -1.18
CDH13-204ENST00000539548 ZNF138P52744 262 aa7.67□□□□□ -1.18
CDH13-204ENST00000539548 RIGQ13278 110 aa7.67□□□□□ -1.18
CDH13-204ENST00000539548 BVES-AS1Q5T3Y7 98 aa7.67□□□□□ -1.18
CDH13-204ENST00000539548 C12orf54Q6X4T0 127 aa7.67□□□□□ -1.18
CDH13-204ENST00000539548 EXOC3-AS1Q8N2X6 119 aa7.67□□□□□ -1.18
CDH13-204ENST00000539548 INSIG2Q9Y5U4 225 aa7.67□□□□□ -1.18
CDH13-204ENST00000539548 IGHV1-3A0A0C4DH29 117 aa7.67□□□□□ -1.18
CDH13-204ENST00000539548 K7EM74 188 aa7.67□□□□□ -1.18
CDH13-204ENST00000539548 NUDT3O95989 172 aa7.67□□□□□ -1.18
CDH13-204ENST00000539548 HTR1DP28221 377 aa7.67□□□□□ -1.18
CDH13-204ENST00000539548 RBX1P62877 108 aa7.67□□□□□ -1.18
CDH13-204ENST00000539548 RHOGP84095 191 aa7.67□□□□□ -1.18
CDH13-204ENST00000539548 LINC01545Q5VT33 79 aa7.67□□□□□ -1.18
CDH13-204ENST00000539548 TMEM75Q8N9X5 138 aa7.67□□□□□ -1.18
CDH13-204ENST00000539548 SCNM1Q9BWG6 230 aa7.67□□□□□ -1.18
CDH13-204ENST00000539548 NGBQ9NPG2 151 aa7.67□□□□□ -1.18
CDH13-204ENST00000539548 TRBV19A0A075B6N1 114 aa7.66□□□□□ -1.18
CDH13-204ENST00000539548 TAX1BP3O14907 124 aa7.66□□□□□ -1.18
CDH13-204ENST00000539548 RPS20P60866 119 aaKnown RBP7.66□□□□□ -1.18
CDH13-204ENST00000539548 LYPD1Q8N2G4 141 aa7.66□□□□□ -1.18
CDH13-204ENST00000539548 DEFB125Q8N687 156 aa7.66□□□□□ -1.18
CDH13-204ENST00000539548 SRSF12Q8WXF0 261 aaKnown RBP7.66□□□□□ -1.18
CDH13-204ENST00000539548 ZC2HC1AQ96GY0 325 aa7.66□□□□□ -1.18
CDH13-204ENST00000539548 RNF5Q99942 180 aa7.66□□□□□ -1.18
CDH13-204ENST00000539548 RASL11BQ9BPW5 248 aa7.66□□□□□ -1.18
CDH13-204ENST00000539548 SRSF8Q9BRL6 282 aaKnown RBP7.66□□□□□ -1.18
CDH13-204ENST00000539548 SHANK2-AS3Q9BTD1 123 aa7.66□□□□□ -1.18
CDH13-204ENST00000539548 JKAMPQ9P055 326 aa7.66□□□□□ -1.18
CDH13-204ENST00000539548 MALRD1Q5VYJ5 2156 aa7.66□□□□□ -1.18
CDH13-204ENST00000539548 BUB1B-PAK6H3BSN5 160 aa7.66□□□□□ -1.18
CDH13-204ENST00000539548 IGKV1-17P01599 117 aa7.66□□□□□ -1.18
CDH13-204ENST00000539548 RBP4P02753 201 aa7.66□□□□□ -1.18
CDH13-204ENST00000539548 ARMS2P0C7Q2 107 aa7.66□□□□□ -1.18
CDH13-204ENST00000539548 VAMP3Q15836 100 aa7.66□□□□□ -1.18
CDH13-204ENST00000539548 Q71RC1 249 aaPredicted RBP7.66□□□□□ -1.18
CDH13-204ENST00000539548 BPIFA4PQ86YQ2 179 aa7.66□□□□□ -1.18
CDH13-204ENST00000539548 OR4C5Q8NGB2 326 aa7.66□□□□□ -1.18
CDH13-204ENST00000539548 TP73-AS1Q9UF72 201 aa7.66□□□□□ -1.18
CDH13-204ENST00000539548 RALYQ9UKM9 306 aaKnown RBP7.66□□□□□ -1.18
CDH13-204ENST00000539548 K7EQM0 130 aa7.65□□□□□ -1.18
CDH13-204ENST00000539548 CDKN1BP46527 198 aa7.65□□□□□ -1.18
CDH13-204ENST00000539548 ZNF747Q9BV97 191 aa7.65□□□□□ -1.18
CDH13-204ENST00000539548 FBXL15Q9H469 300 aa7.65□□□□□ -1.18
CDH13-204ENST00000539548 AP5S1Q9NUS5 200 aa7.65□□□□□ -1.18
CDH13-204ENST00000539548 PSG8Q9UQ74 426 aa7.65□□□□□ -1.18
CDH13-204ENST00000539548 KMT2BQ9UMN6 2715 aaPredicted RBP7.64□□□□□ -1.19
CDH13-204ENST00000539548 H3BRN7 92 aa7.64□□□□□ -1.19
CDH13-204ENST00000539548 PRRG2O14669 202 aa7.64□□□□□ -1.19
CDH13-204ENST00000539548 CD5LO43866 347 aa7.64□□□□□ -1.19
CDH13-204ENST00000539548 CSN3P07498 182 aa7.64□□□□□ -1.19
CDH13-204ENST00000539548 HIST1H1AQ02539 215 aaPredicted RBP7.64□□□□□ -1.19
CDH13-204ENST00000539548 PSG3Q16557 428 aa7.64□□□□□ -1.19
CDH13-204ENST00000539548 Q6AWC8 147 aa7.64□□□□□ -1.19
CDH13-204ENST00000539548 SIGLEC15Q6ZMC9 328 aa7.64□□□□□ -1.19
CDH13-204ENST00000539548 C17orf77Q96MU5 243 aa7.64□□□□□ -1.19
CDH13-204ENST00000539548 PMCHL2Q9BQD1 86 aa7.64□□□□□ -1.19
CDH13-204ENST00000539548 DYNLRB1Q9NP97 96 aa7.64□□□□□ -1.19
CDH13-204ENST00000539548 CHD8Q9HCK8 2581 aa7.64□□□□□ -1.19
CDH13-204ENST00000539548 LOC400499M0QZD8 3231 aa7.64□□□□□ -1.19
CDH13-204ENST00000539548 MUC21A0A0G2JKD1 596 aa7.64□□□□□ -1.19
CDH13-204ENST00000539548 MUC21A0A140T8X8 626 aa7.64□□□□□ -1.19
CDH13-204ENST00000539548 SHISA9B4DS77 424 aa7.64□□□□□ -1.19
CDH13-204ENST00000539548 E7EQL1 145 aa7.64□□□□□ -1.19
CDH13-204ENST00000539548 TOX4O94842 621 aa7.64□□□□□ -1.19
CDH13-204ENST00000539548 CSN1S1P47710 185 aa7.64□□□□□ -1.19
CDH13-204ENST00000539548 CRIP1P50238 77 aa7.64□□□□□ -1.19
CDH13-204ENST00000539548 MUC21Q5SSG8 566 aa7.64□□□□□ -1.19
CDH13-204ENST00000539548 ZNF493Q6ZR52 646 aa7.64□□□□□ -1.19
CDH13-204ENST00000539548 OR10AG1Q8NH19 301 aa7.64□□□□□ -1.19
CDH13-204ENST00000539548 LY6LH3BQJ8 138 aa7.63□□□□□ -1.19
CDH13-204ENST00000539548 K7EIM0 57 aa7.63□□□□□ -1.19
CDH13-204ENST00000539548 MRPS12O15235 138 aaKnown RBP7.63□□□□□ -1.19
CDH13-204ENST00000539548 COX8AP10176 69 aa7.63□□□□□ -1.19
CDH13-204ENST00000539548 ARF6P62330 175 aa7.63□□□□□ -1.19
CDH13-204ENST00000539548 FA2HQ7L5A8 372 aa7.63□□□□□ -1.19
CDH13-204ENST00000539548 PRSS3P2Q8NHM4 247 aa7.63□□□□□ -1.19
CDH13-204ENST00000539548 DPF1Q92782 380 aa7.63□□□□□ -1.19
CDH13-204ENST00000539548 ZNF414Q96IQ9 312 aa7.63□□□□□ -1.19
CDH13-204ENST00000539548 MCRIP2Q9BUT9 160 aaKnown RBP7.63□□□□□ -1.19
CDH13-204ENST00000539548 CFAP47Q6ZTR5 3102 aa7.63□□□□□ -1.19
CDH13-204ENST00000539548 WI2-2373I1.2A0A1W2PRP0 233 aa7.63□□□□□ -1.19
CDH13-204ENST00000539548 GPR183P32249 361 aa7.63□□□□□ -1.19
CDH13-204ENST00000539548 DLX1P56177 255 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms