RNA–Protein interactions for RNA: ENST00000539512.1

TRAV11-201, Transcript of T cell receptor alpha variable 11 (pseudogene), humanhuman

BASIC

Gene TRAV11, Length 339 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV11-201ENST00000539512 FABP5P3A8MUU1 101 aa2.1□□□□□ -2.07
TRAV11-201ENST00000539512 SMIM10L2AP0DMW4 78 aa2.1□□□□□ -2.07
TRAV11-201ENST00000539512 SMIM10L2BP0DMW5 78 aa2.1□□□□□ -2.07
TRAV11-201ENST00000539512 IFITM2Q01629 132 aa2.1□□□□□ -2.07
TRAV11-201ENST00000539512 PMAIP1Q13794 54 aa2.1□□□□□ -2.07
TRAV11-201ENST00000539512 Q1T7F1 81 aa2.1□□□□□ -2.07
TRAV11-201ENST00000539512 PSTPIP2Q9H939 334 aa2.1□□□□□ -2.07
TRAV11-201ENST00000539512 XPNPEP1Q9NQW7 623 aa2.1□□□□□ -2.07
TRAV11-201ENST00000539512 APCP25054 2843 aa2.1□□□□□ -2.07
TRAV11-201ENST00000539512 COL6A5A8TX70 2615 aa2.1□□□□□ -2.07
TRAV11-201ENST00000539512 ATG2AQ2TAZ0 1938 aa2.09□□□□□ -2.07
TRAV11-201ENST00000539512 CCL16O15467 120 aa2.09□□□□□ -2.07
TRAV11-201ENST00000539512 ATP5HO75947 161 aa2.09□□□□□ -2.07
TRAV11-201ENST00000539512 PRM2P04554 102 aa2.09□□□□□ -2.07
TRAV11-201ENST00000539512 CDKN2CP42773 168 aa2.09□□□□□ -2.07
TRAV11-201ENST00000539512 RGS21Q2M5E4 152 aa2.09□□□□□ -2.07
TRAV11-201ENST00000539512 CHMP6Q96FZ7 201 aa2.09□□□□□ -2.07
TRAV11-201ENST00000539512 CCDC94Q9BW85 323 aaPredicted RBP2.09□□□□□ -2.07
TRAV11-201ENST00000539512 TGP01266 2768 aa2.09□□□□□ -2.08
TRAV11-201ENST00000539512 RYR3Q15413 4870 aa2.08□□□□□ -2.08
TRAV11-201ENST00000539512 TLN2Q9Y4G6 2542 aa2.08□□□□□ -2.08
TRAV11-201ENST00000539512 M0R036 132 aa2.08□□□□□ -2.08
TRAV11-201ENST00000539512 LYPLA2O95372 231 aa2.08□□□□□ -2.08
TRAV11-201ENST00000539512 IFNA5P01569 189 aa2.08□□□□□ -2.08
TRAV11-201ENST00000539512 PMP2P02689 132 aa2.08□□□□□ -2.08
TRAV11-201ENST00000539512 RPS4Y1P22090 263 aaKnown RBP2.08□□□□□ -2.08
TRAV11-201ENST00000539512 HOXA6P31267 233 aa2.08□□□□□ -2.08
TRAV11-201ENST00000539512 NKX2-5P52952 324 aaPredicted RBP2.08□□□□□ -2.08
TRAV11-201ENST00000539512 FADDQ13158 208 aa2.08□□□□□ -2.08
TRAV11-201ENST00000539512 CDK5R1Q15078 307 aa2.08□□□□□ -2.08
TRAV11-201ENST00000539512 HIST3H3Q16695 136 aa2.08□□□□□ -2.08
TRAV11-201ENST00000539512 IBA57Q5T440 356 aaKnown RBP2.08□□□□□ -2.08
TRAV11-201ENST00000539512 SFXN4Q6P4A7 337 aa2.08□□□□□ -2.08
TRAV11-201ENST00000539512 DHFR2Q86XF0 187 aa2.08□□□□□ -2.08
TRAV11-201ENST00000539512 LINC00471Q8N535 108 aa2.08□□□□□ -2.08
TRAV11-201ENST00000539512 MED9Q9NWA0 146 aa2.08□□□□□ -2.08
TRAV11-201ENST00000539512 GUCA1BQ9UMX6 200 aa2.08□□□□□ -2.08
TRAV11-201ENST00000539512 DSCAMO60469 2012 aa2.08□□□□□ -2.08
TRAV11-201ENST00000539512 PCLOQ9Y6V0 5065 aa2.08□□□□□ -2.08
TRAV11-201ENST00000539512 MUC22E2RYF6 1773 aaPredicted RBP2.08□□□□□ -2.08
TRAV11-201ENST00000539512 PATJQ8NI35 1801 aa2.07□□□□□ -2.08
TRAV11-201ENST00000539512 NCKAP5O14513 1909 aa2.07□□□□□ -2.08
TRAV11-201ENST00000539512 NBASA2RRP1 2371 aa2.07□□□□□ -2.08
TRAV11-201ENST00000539512 TACC2O95359 2948 aa2.07□□□□□ -2.08
TRAV11-201ENST00000539512 IGKV3-7A0A075B6H7 116 aa2.07□□□□□ -2.08
TRAV11-201ENST00000539512 A0A0J9YY10 115 aa2.07□□□□□ -2.08
TRAV11-201ENST00000539512 A0A1B0GX78 115 aa2.07□□□□□ -2.08
TRAV11-201ENST00000539512 TMEM210A6NLX4 147 aa2.07□□□□□ -2.08
TRAV11-201ENST00000539512 INMT-MINDY4F8WBC2 141 aa2.07□□□□□ -2.08
TRAV11-201ENST00000539512 SERPINA6P08185 405 aa2.07□□□□□ -2.08
TRAV11-201ENST00000539512 RPS17P08708 135 aaKnown RBP2.07□□□□□ -2.08
TRAV11-201ENST00000539512 OR5G3P0C626 314 aa2.07□□□□□ -2.08
TRAV11-201ENST00000539512 CEBPGP53567 150 aa2.07□□□□□ -2.08
TRAV11-201ENST00000539512 BASP1P80723 227 aaKnown RBP2.07□□□□□ -2.08
TRAV11-201ENST00000539512 STX5Q13190 355 aa2.07□□□□□ -2.08
TRAV11-201ENST00000539512 SRSF6Q13247 344 aaKnown RBP2.07□□□□□ -2.08
TRAV11-201ENST00000539512 GUK1Q16774 197 aa2.07□□□□□ -2.08
TRAV11-201ENST00000539512 AAED1Q7RTV5 226 aa2.07□□□□□ -2.08
TRAV11-201ENST00000539512 WFDC11Q8NEX6 87 aa2.07□□□□□ -2.08
TRAV11-201ENST00000539512 TSTD1Q8NFU3 115 aa2.07□□□□□ -2.08
TRAV11-201ENST00000539512 CDC26Q8NHZ8 85 aa2.07□□□□□ -2.08
TRAV11-201ENST00000539512 C11orf40Q8WZ69 217 aa2.07□□□□□ -2.08
TRAV11-201ENST00000539512 SMR3AQ99954 134 aa2.07□□□□□ -2.08
TRAV11-201ENST00000539512 ADAT1Q9BUB4 502 aaKnown RBP2.07□□□□□ -2.08
TRAV11-201ENST00000539512 YIPF3Q9GZM5 350 aa2.07□□□□□ -2.08
TRAV11-201ENST00000539512 WDR61Q9GZS3 305 aaKnown RBP2.07□□□□□ -2.08
TRAV11-201ENST00000539512 BAIAP2Q9UQB8 552 aa2.07□□□□□ -2.08
TRAV11-201ENST00000539512 MICAL3Q7RTP6 2002 aa2.07□□□□□ -2.08
TRAV11-201ENST00000539512 CSPG4Q6UVK1 2322 aa2.06□□□□□ -2.08
TRAV11-201ENST00000539512 EEF1E1-BLOC1S5C9J1V9 151 aa2.06□□□□□ -2.08
TRAV11-201ENST00000539512 GOLGA6L19H0YKK7 550 aa2.06□□□□□ -2.08
TRAV11-201ENST00000539512 TRAPPC2LH3BP13 241 aa2.06□□□□□ -2.08
TRAV11-201ENST00000539512 MRPS14O60783 128 aaKnown RBP2.06□□□□□ -2.08
TRAV11-201ENST00000539512 SPCS3P61009 180 aa2.06□□□□□ -2.08
TRAV11-201ENST00000539512 CCL20P78556 96 aa2.06□□□□□ -2.08
TRAV11-201ENST00000539512 IMPG1Q17R60 797 aa2.06□□□□□ -2.08
TRAV11-201ENST00000539512 C8orf74Q6P047 294 aa2.06□□□□□ -2.08
TRAV11-201ENST00000539512 UNQ6190/PRO20217Q6UXQ8 127 aa2.06□□□□□ -2.08
TRAV11-201ENST00000539512 PPTC7Q8NI37 304 aa2.06□□□□□ -2.08
TRAV11-201ENST00000539512 TMEM106AQ96A25 262 aa2.06□□□□□ -2.08
TRAV11-201ENST00000539512 OR51V1Q9H2C8 321 aa2.06□□□□□ -2.08
TRAV11-201ENST00000539512 MDC1Q14676 2089 aaKnown RBP2.06□□□□□ -2.08
TRAV11-201ENST00000539512 PLXNA4Q9HCM2 1894 aa2.05□□□□□ -2.08
TRAV11-201ENST00000539512 ARHGAP32A7KAX9 2087 aa2.05□□□□□ -2.08
TRAV11-201ENST00000539512 IGKV1D-43A0A0B4J1Z2 117 aa2.05□□□□□ -2.08
TRAV11-201ENST00000539512 IBA57-AS1B1ANH7 110 aa2.05□□□□□ -2.08
TRAV11-201ENST00000539512 PSMD12O00232 456 aaPredicted RBP2.05□□□□□ -2.08
TRAV11-201ENST00000539512 TCEAL4Q96EI5 215 aa2.05□□□□□ -2.08
TRAV11-201ENST00000539512 IMP4Q96G21 291 aaKnown RBP2.05□□□□□ -2.08
TRAV11-201ENST00000539512 CCDC42Q96M95 316 aa2.05□□□□□ -2.08
TRAV11-201ENST00000539512 OR52E6Q96RD3 313 aa2.05□□□□□ -2.08
TRAV11-201ENST00000539512 SERPINI1Q99574 410 aa2.05□□□□□ -2.08
TRAV11-201ENST00000539512 COMMD5Q9GZQ3 224 aa2.05□□□□□ -2.08
TRAV11-201ENST00000539512 CUBNO60494 3623 aa2.04□□□□□ -2.08
TRAV11-201ENST00000539512 KMT2CQ8NEZ4 4911 aaKnown RBP2.04□□□□□ -2.08
TRAV11-201ENST00000539512 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP2.04□□□□□ -2.08
TRAV11-201ENST00000539512 CD79AP11912 226 aa2.04□□□□□ -2.08
TRAV11-201ENST00000539512 HIST1H2BOP23527 126 aa2.04□□□□□ -2.08
TRAV11-201ENST00000539512 HIST1H2BBP33778 126 aa2.04□□□□□ -2.08
TRAV11-201ENST00000539512 G6PCP35575 357 aa2.04□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms