RNA–Protein interactions for RNA: ENST00000538654.5

SNHG1-209, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 2,768 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-209ENST00000538654 FSTL3O95633 263 aa7.25□□□□□ -1.25
SNHG1-209ENST00000538654 CSN3P07498 182 aa7.25□□□□□ -1.25
SNHG1-209ENST00000538654 SRSF1Q07955 248 aaKnown RBP eCLIP7.25□□□□□ -1.255e-12■■□□□ 12.5
SNHG1-209ENST00000538654 C3AR1Q16581 482 aa7.25□□□□□ -1.25
SNHG1-209ENST00000538654 ZADH2Q8N4Q0 377 aa7.25□□□□□ -1.25
SNHG1-209ENST00000538654 NDUFA4L2Q9NRX3 87 aa7.25□□□□□ -1.25
SNHG1-209ENST00000538654 TIMM8BQ9Y5J9 83 aaPredicted RBP7.25□□□□□ -1.25
SNHG1-209ENST00000538654 DOCK10Q96BY6 2186 aa7.25□□□□□ -1.25
SNHG1-209ENST00000538654 PI4KAP42356 2102 aa7.24□□□□□ -1.25
SNHG1-209ENST00000538654 C17orf58Q2M2W7 97 aa7.24□□□□□ -1.25
SNHG1-209ENST00000538654 ADAMTSL5Q6ZMM2 481 aa7.24□□□□□ -1.25
SNHG1-209ENST00000538654 LINC00322Q6ZN03 302 aaPredicted RBP7.24□□□□□ -1.25
SNHG1-209ENST00000538654 OSR1Q8TAX0 266 aaPredicted RBP7.24□□□□□ -1.25
SNHG1-209ENST00000538654 BLNKQ8WV28 456 aa7.24□□□□□ -1.25
SNHG1-209ENST00000538654 ITLN1Q8WWA0 313 aa7.24□□□□□ -1.25
SNHG1-209ENST00000538654 ZC2HC1AQ96GY0 325 aa7.24□□□□□ -1.25
SNHG1-209ENST00000538654 SMPXQ9UHP9 88 aa7.24□□□□□ -1.25
SNHG1-209ENST00000538654 VCANP13611 3396 aa7.24□□□□□ -1.25
SNHG1-209ENST00000538654 TSPAN13O95857 204 aa7.24□□□□□ -1.25
SNHG1-209ENST00000538654 TCRAP04437 139 aa7.24□□□□□ -1.25
SNHG1-209ENST00000538654 SMIM13P0DJ93 91 aa7.24□□□□□ -1.25
SNHG1-209ENST00000538654 IGHV1-2P23083 117 aa7.24□□□□□ -1.25
SNHG1-209ENST00000538654 LEAP2Q969E1 77 aa7.24□□□□□ -1.25
SNHG1-209ENST00000538654 SDK1Q7Z5N4 2213 aa7.23□□□□□ -1.25
SNHG1-209ENST00000538654 GNG7O60262 68 aa7.23□□□□□ -1.25
SNHG1-209ENST00000538654 FCN3O75636 299 aa7.23□□□□□ -1.25
SNHG1-209ENST00000538654 SAA1P0DJI8 122 aaPredicted RBP7.23□□□□□ -1.25
SNHG1-209ENST00000538654 CT45A10P0DMU9 189 aa7.23□□□□□ -1.25
SNHG1-209ENST00000538654 PPIAL4GP0DN37 164 aa7.23□□□□□ -1.25
SNHG1-209ENST00000538654 SAMD5Q5TGI4 173 aa7.23□□□□□ -1.25
SNHG1-209ENST00000538654 Q6AWC8 147 aa7.23□□□□□ -1.25
SNHG1-209ENST00000538654 HES7Q9BYE0 225 aa7.23□□□□□ -1.25
SNHG1-209ENST00000538654 THYN1Q9P016 225 aa7.23□□□□□ -1.25
SNHG1-209ENST00000538654 HILPDAQ9Y5L2 63 aa7.23□□□□□ -1.25
SNHG1-209ENST00000538654 IGKV3-15P01624 115 aa7.23□□□□□ -1.25
SNHG1-209ENST00000538654 RPL24P83731 157 aaKnown RBP7.23□□□□□ -1.25
SNHG1-209ENST00000538654 ZCCHC24Q8N2G6 241 aaKnown RBP7.23□□□□□ -1.25
SNHG1-209ENST00000538654 OR10W1Q8NGF6 305 aa7.23□□□□□ -1.25
SNHG1-209ENST00000538654 OR4A5Q8NH83 315 aa7.23□□□□□ -1.25
SNHG1-209ENST00000538654 SGK494Q96LW2 274 aa7.23□□□□□ -1.25
SNHG1-209ENST00000538654 TRBV6-1A0A0K0K1D8 114 aa7.22□□□□□ -1.25
SNHG1-209ENST00000538654 LYZL6O75951 148 aa7.22□□□□□ -1.25
SNHG1-209ENST00000538654 NCR2O95944 276 aa7.22□□□□□ -1.25
SNHG1-209ENST00000538654 CT45A6P0DMU7 189 aa7.22□□□□□ -1.25
SNHG1-209ENST00000538654 CT45A5P0DMU8 189 aa7.22□□□□□ -1.25
SNHG1-209ENST00000538654 CT45A7P0DMV0 189 aa7.22□□□□□ -1.25
SNHG1-209ENST00000538654 AZU1P20160 251 aa7.22□□□□□ -1.25
SNHG1-209ENST00000538654 PRR31Q5SQ13 230 aa7.22□□□□□ -1.25
SNHG1-209ENST00000538654 Q86TA4 180 aa7.22□□□□□ -1.25
SNHG1-209ENST00000538654 ZNRF1Q8ND25 227 aa7.22□□□□□ -1.25
SNHG1-209ENST00000538654 OR8A1Q8NGG7 326 aa7.22□□□□□ -1.25
SNHG1-209ENST00000538654 RAB37Q96AX2 223 aa7.22□□□□□ -1.25
SNHG1-209ENST00000538654 TIMD4Q96H15 378 aa7.22□□□□□ -1.25
SNHG1-209ENST00000538654 LAMA1P25391 3075 aa7.22□□□□□ -1.25
SNHG1-209ENST00000538654 IGKV1-16P04430 117 aa7.22□□□□□ -1.25
SNHG1-209ENST00000538654 CXCL12P48061 93 aa7.22□□□□□ -1.25
SNHG1-209ENST00000538654 MEOX1P50221 254 aa7.22□□□□□ -1.25
SNHG1-209ENST00000538654 FOXE3Q13461 319 aa7.22□□□□□ -1.25
SNHG1-209ENST00000538654 CD300EQ496F6 205 aaPredicted RBP7.22□□□□□ -1.25
SNHG1-209ENST00000538654 Q6ZT83 130 aa7.22□□□□□ -1.25
SNHG1-209ENST00000538654 UBALD2Q8IYN6 164 aa7.22□□□□□ -1.25
SNHG1-209ENST00000538654 Q9H3A6 140 aa7.22□□□□□ -1.25
SNHG1-209ENST00000538654 RETNQ9HD89 108 aa7.22□□□□□ -1.25
SNHG1-209ENST00000538654 OTORQ9NRC9 128 aa7.22□□□□□ -1.25
SNHG1-209ENST00000538654 DNAJC13O75165 2243 aa7.21□□□□□ -1.25
SNHG1-209ENST00000538654 IGKV1D-37A0A075B6S9 117 aa7.21□□□□□ -1.25
SNHG1-209ENST00000538654 PPIAL4CA0A0B4J2A2 164 aa7.21□□□□□ -1.25
SNHG1-209ENST00000538654 CCL24O00175 119 aa7.21□□□□□ -1.25
SNHG1-209ENST00000538654 SSBP2P81877 361 aaPredicted RBP7.21□□□□□ -1.25
SNHG1-209ENST00000538654 FAM159AQ6UWV7 190 aa7.21□□□□□ -1.25
SNHG1-209ENST00000538654 OR10X1Q8NGY0 326 aa7.21□□□□□ -1.25
SNHG1-209ENST00000538654 IL17DQ8TAD2 202 aa7.21□□□□□ -1.25
SNHG1-209ENST00000538654 HIGD1BQ9P298 99 aa7.21□□□□□ -1.25
SNHG1-209ENST00000538654 IGHV3OR15-7A0A075B7D8 119 aa7.21□□□□□ -1.26
SNHG1-209ENST00000538654 TM4SF5O14894 197 aa7.21□□□□□ -1.26
SNHG1-209ENST00000538654 AGFG2O95081 481 aa7.21□□□□□ -1.26
SNHG1-209ENST00000538654 ORM2P19652 201 aa7.21□□□□□ -1.26
SNHG1-209ENST00000538654 PIFOQ8TCI5 191 aa7.21□□□□□ -1.26
SNHG1-209ENST00000538654 LINC00574Q9H8X3 128 aa7.21□□□□□ -1.26
SNHG1-209ENST00000538654 SIGLEC8Q9NYZ4 499 aa7.21□□□□□ -1.26
SNHG1-209ENST00000538654 FZR1Q9UM11 496 aa7.21□□□□□ -1.26
SNHG1-209ENST00000538654 TANC2Q9HCD6 1990 aa7.21□□□□□ -1.26
SNHG1-209ENST00000538654 DYSFO75923 2080 aa7.21□□□□□ -1.26
SNHG1-209ENST00000538654 PCSK5Q92824 1860 aa7.2□□□□□ -1.26
SNHG1-209ENST00000538654 TEX48A0A1B0GUV7 120 aa7.2□□□□□ -1.26
SNHG1-209ENST00000538654 ZNF207O43670 478 aaKnown RBP7.2□□□□□ -1.26
SNHG1-209ENST00000538654 PLAUP00749 431 aa7.2□□□□□ -1.26
SNHG1-209ENST00000538654 DHRS13Q6UX07 377 aa7.2□□□□□ -1.26
SNHG1-209ENST00000538654 IL17RELQ6ZVW7 336 aa7.2□□□□□ -1.26
SNHG1-209ENST00000538654 BAALCQ8WXS3 180 aa7.2□□□□□ -1.26
SNHG1-209ENST00000538654 ZNF414Q96IQ9 312 aa7.2□□□□□ -1.26
SNHG1-209ENST00000538654 TRGV9Q99603 122 aa7.2□□□□□ -1.26
SNHG1-209ENST00000538654 NAA38Q9BRA0 125 aaKnown RBP7.2□□□□□ -1.26
SNHG1-209ENST00000538654 TRGV5A0A0B4J1U4 118 aa7.2□□□□□ -1.26
SNHG1-209ENST00000538654 F8W1H4 67 aa7.2□□□□□ -1.26
SNHG1-209ENST00000538654 HBDP02042 147 aa7.2□□□□□ -1.26
SNHG1-209ENST00000538654 GP9P14770 177 aa7.2□□□□□ -1.26
SNHG1-209ENST00000538654 CACNG7P62955 275 aa7.2□□□□□ -1.26
SNHG1-209ENST00000538654 ZNF493Q6ZR52 646 aa7.2□□□□□ -1.26
SNHG1-209ENST00000538654 TMEM167AQ8TBQ9 72 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms