RNA–Protein interactions for RNA: ENST00000538545.6

ACTN1-205, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 2,813 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-205ENST00000538545 SMAD7O15105 426 aaKnown RBP10.98□□□□□ -0.65
ACTN1-205ENST00000538545 KRTAP1-3Q8IUG1 177 aa10.98□□□□□ -0.65
ACTN1-205ENST00000538545 OR5B12Q96R08 314 aa10.98□□□□□ -0.65
ACTN1-205ENST00000538545 CTDSP1Q9GZU7 261 aa10.98□□□□□ -0.65
ACTN1-205ENST00000538545 TRAV20A0A0B4J274 112 aa10.97□□□□□ -0.65
ACTN1-205ENST00000538545 WI2-2373I1.2A0A1W2PRP0 233 aa10.97□□□□□ -0.65
ACTN1-205ENST00000538545 H3BRN7 92 aa10.97□□□□□ -0.65
ACTN1-205ENST00000538545 MYCNOSP40205 109 aa10.97□□□□□ -0.65
ACTN1-205ENST00000538545 TCL1AP56279 114 aa10.97□□□□□ -0.65
ACTN1-205ENST00000538545 ZNF502Q8TBZ5 544 aa10.97□□□□□ -0.65
ACTN1-205ENST00000538545 FRZBQ92765 325 aa10.97□□□□□ -0.65
ACTN1-205ENST00000538545 IGF2BP2-AS1Q96M15 143 aa10.97□□□□□ -0.65
ACTN1-205ENST00000538545 SHANK2-AS3Q9BTD1 123 aa10.97□□□□□ -0.65
ACTN1-205ENST00000538545 A6NDX4 124 aa10.97□□□□□ -0.65
ACTN1-205ENST00000538545 OR10G8Q8NGN5 311 aa10.97□□□□□ -0.65
ACTN1-205ENST00000538545 APOHP02749 345 aaPredicted RBP10.96□□□□□ -0.65
ACTN1-205ENST00000538545 EPDR1Q9UM22 224 aa10.96□□□□□ -0.65
ACTN1-205ENST00000538545 TRBV9A0A0B4J1U6 114 aa10.96□□□□□ -0.66
ACTN1-205ENST00000538545 PDZD11Q5EBL8 140 aa10.96□□□□□ -0.66
ACTN1-205ENST00000538545 ANAPC16Q96DE5 110 aa10.96□□□□□ -0.66
ACTN1-205ENST00000538545 TRGV3P03979 118 aa10.95□□□□□ -0.66
ACTN1-205ENST00000538545 S100A6P06703 90 aa10.95□□□□□ -0.66
ACTN1-205ENST00000538545 HLA-DMBP28068 263 aa10.95□□□□□ -0.66
ACTN1-205ENST00000538545 YPEL3P61236 119 aaPredicted RBP10.95□□□□□ -0.66
ACTN1-205ENST00000538545 TOMM20LQ6UXN7 152 aa10.95□□□□□ -0.66
ACTN1-205ENST00000538545 SERTAD4Q9NUC0 356 aa10.95□□□□□ -0.66
ACTN1-205ENST00000538545 J3QKU1 62 aa10.95□□□□□ -0.66
ACTN1-205ENST00000538545 HIST1H2BKO60814 126 aa10.95□□□□□ -0.66
ACTN1-205ENST00000538545 HIST1H2BJP06899 126 aa10.95□□□□□ -0.66
ACTN1-205ENST00000538545 HIST1H2BOP23527 126 aa10.95□□□□□ -0.66
ACTN1-205ENST00000538545 HIST1H2BBP33778 126 aa10.95□□□□□ -0.66
ACTN1-205ENST00000538545 HIST1H2BDP58876 126 aa10.95□□□□□ -0.66
ACTN1-205ENST00000538545 HIST1H2BCP62807 126 aa10.95□□□□□ -0.66
ACTN1-205ENST00000538545 FABP9Q0Z7S8 132 aa10.95□□□□□ -0.66
ACTN1-205ENST00000538545 HIST2H2BEQ16778 126 aa10.95□□□□□ -0.66
ACTN1-205ENST00000538545 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.95□□□□□ -0.66
ACTN1-205ENST00000538545 GFI1BQ5VTD9 330 aa10.95□□□□□ -0.66
ACTN1-205ENST00000538545 HIST2H2BDQ6DRA6 164 aa10.95□□□□□ -0.66
ACTN1-205ENST00000538545 HIST1H2BHQ93079 126 aa10.95□□□□□ -0.66
ACTN1-205ENST00000538545 HIST1H2BNQ99877 126 aa10.95□□□□□ -0.66
ACTN1-205ENST00000538545 HIST1H2BMQ99879 126 aa10.95□□□□□ -0.66
ACTN1-205ENST00000538545 TRBV24-1A0A075B6N3 115 aa10.94□□□□□ -0.66
ACTN1-205ENST00000538545 ZNF320A2RRD8 509 aa10.94□□□□□ -0.66
ACTN1-205ENST00000538545 C9JCJ5 164 aa10.94□□□□□ -0.66
ACTN1-205ENST00000538545 NDUFA6P56556 154 aa10.94□□□□□ -0.66
ACTN1-205ENST00000538545 LINC00322Q6ZN03 302 aaPredicted RBP10.94□□□□□ -0.66
ACTN1-205ENST00000538545 GOLT1AQ6ZVE7 132 aa10.94□□□□□ -0.66
ACTN1-205ENST00000538545 BAGE2Q86Y30 109 aa10.94□□□□□ -0.66
ACTN1-205ENST00000538545 ARL2-SNX15V9GYD0 113 aa10.94□□□□□ -0.66
ACTN1-205ENST00000538545 MRPS12O15235 138 aaKnown RBP10.94□□□□□ -0.66
ACTN1-205ENST00000538545 TRGC1P0CF51 173 aa10.94□□□□□ -0.66
ACTN1-205ENST00000538545 S100PP25815 95 aa10.94□□□□□ -0.66
ACTN1-205ENST00000538545 CNN1P51911 297 aaKnown RBP10.94□□□□□ -0.66
ACTN1-205ENST00000538545 TPPP2P59282 170 aa10.94□□□□□ -0.66
ACTN1-205ENST00000538545 BPIFA4PQ86YQ2 179 aa10.94□□□□□ -0.66
ACTN1-205ENST00000538545 STXBP6Q8NFX7 210 aa10.94□□□□□ -0.66
ACTN1-205ENST00000538545 ZNF48Q96MX3 618 aaPredicted RBP10.94□□□□□ -0.66
ACTN1-205ENST00000538545 BEX4Q9NWD9 120 aaPredicted RBP10.94□□□□□ -0.66
ACTN1-205ENST00000538545 SORL1Q92673 2214 aa10.94□□□□□ -0.66
ACTN1-205ENST00000538545 TRAV30A0A087WSZ9 112 aa10.94□□□□□ -0.66
ACTN1-205ENST00000538545 IGLC2P0DOY2 106 aa10.94□□□□□ -0.66
ACTN1-205ENST00000538545 HIST1H1EP10412 219 aaKnown RBP10.94□□□□□ -0.66
ACTN1-205ENST00000538545 HIST1H1BP16401 226 aaKnown RBP10.94□□□□□ -0.66
ACTN1-205ENST00000538545 LOXL1Q08397 574 aaPredicted RBP10.94□□□□□ -0.66
ACTN1-205ENST00000538545 PSMG3-AS1Q96PY0 264 aa10.94□□□□□ -0.66
ACTN1-205ENST00000538545 V9GYV3 84 aa10.94□□□□□ -0.66
ACTN1-205ENST00000538545 TRBV19A0A075B6N1 114 aa10.93□□□□□ -0.66
ACTN1-205ENST00000538545 PF4V1P10720 104 aa10.93□□□□□ -0.66
ACTN1-205ENST00000538545 BIN3Q9NQY0 253 aa10.93□□□□□ -0.66
ACTN1-205ENST00000538545 TCRAP04437 139 aa10.93□□□□□ -0.66
ACTN1-205ENST00000538545 UBE2G1P62253 170 aa10.93□□□□□ -0.66
ACTN1-205ENST00000538545 C19orf54Q5BKX5 351 aa10.93□□□□□ -0.66
ACTN1-205ENST00000538545 OR8I2Q8N0Y5 310 aa10.93□□□□□ -0.66
ACTN1-205ENST00000538545 CDC42EP3Q9UKI2 254 aa10.93□□□□□ -0.66
ACTN1-205ENST00000538545 C5orf52A6NGY3 159 aa10.92□□□□□ -0.66
ACTN1-205ENST00000538545 NDUFS6O75380 124 aaKnown RBP10.92□□□□□ -0.66
ACTN1-205ENST00000538545 FABP1P07148 127 aa10.92□□□□□ -0.66
ACTN1-205ENST00000538545 IBA57Q5T440 356 aaKnown RBP10.92□□□□□ -0.66
ACTN1-205ENST00000538545 OR4F17Q8NGA8 305 aa10.92□□□□□ -0.66
ACTN1-205ENST00000538545 SMAD5-AS1Q9Y6J3 95 aa10.92□□□□□ -0.66
ACTN1-205ENST00000538545 IGHG2P01859 326 aa10.92□□□□□ -0.66
ACTN1-205ENST00000538545 SIGLEC15Q6ZMC9 328 aa10.92□□□□□ -0.66
ACTN1-205ENST00000538545 TMEM68Q96MH6 324 aa10.92□□□□□ -0.66
ACTN1-205ENST00000538545 IMMP2LQ96T52 175 aa10.92□□□□□ -0.66
ACTN1-205ENST00000538545 ZFAND3Q9H8U3 227 aa10.92□□□□□ -0.66
ACTN1-205ENST00000538545 PRELID1Q9Y255 219 aa10.92□□□□□ -0.66
ACTN1-205ENST00000538545 PHOX2AO14813 284 aa10.91□□□□□ -0.66
ACTN1-205ENST00000538545 PPIFP30405 207 aaKnown RBP10.91□□□□□ -0.66
ACTN1-205ENST00000538545 ATP5G2Q06055 141 aa10.91□□□□□ -0.66
ACTN1-205ENST00000538545 UNQ9165/PRO28630Q6UXU0 137 aa10.91□□□□□ -0.66
ACTN1-205ENST00000538545 PRNTQ86SH4 94 aa10.91□□□□□ -0.66
ACTN1-205ENST00000538545 VN1R17PQ8TDU5 208 aa10.91□□□□□ -0.66
ACTN1-205ENST00000538545 PYGO2Q9BRQ0 406 aa10.91□□□□□ -0.66
ACTN1-205ENST00000538545 A0A1B0GUS0 222 aa10.91□□□□□ -0.66
ACTN1-205ENST00000538545 CLPSL1A2RUU4 121 aa10.91□□□□□ -0.66
ACTN1-205ENST00000538545 ZNF705FA8MVS1 300 aaPredicted RBP10.91□□□□□ -0.66
ACTN1-205ENST00000538545 TGOLN2O43493 480 aa10.91□□□□□ -0.66
ACTN1-205ENST00000538545 GGCTO75223 188 aaKnown RBP10.91□□□□□ -0.66
ACTN1-205ENST00000538545 GCGP01275 180 aa10.91□□□□□ -0.66
ACTN1-205ENST00000538545 GATA3P23771 443 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms