RNA–Protein interactions for RNA: ENST00000538363.1

TNFRSF1A-211, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-211ENST00000538363 SPATA31B1PQ5VZV4 182 aa8.19□□□□□ -1.1
TNFRSF1A-211ENST00000538363 LEMD1Q68G75 181 aa8.19□□□□□ -1.1
TNFRSF1A-211ENST00000538363 PATE2Q6UY27 113 aa8.19□□□□□ -1.1
TNFRSF1A-211ENST00000538363 PQLC2Q6ZP29 291 aa8.19□□□□□ -1.1
TNFRSF1A-211ENST00000538363 DYNLRB2Q8TF09 96 aa8.19□□□□□ -1.1
TNFRSF1A-211ENST00000538363 SHANK2-AS3Q9BTD1 123 aa8.19□□□□□ -1.1
TNFRSF1A-211ENST00000538363 EIF5A2Q9GZV4 153 aaKnown RBP8.19□□□□□ -1.1
TNFRSF1A-211ENST00000538363 SEPSECSQ9HD40 501 aaKnown RBP8.19□□□□□ -1.1
TNFRSF1A-211ENST00000538363 DAZ1Q9NQZ3 744 aaKnown RBP8.19□□□□□ -1.1
TNFRSF1A-211ENST00000538363 MRPL27Q9P0M9 148 aaKnown RBP8.19□□□□□ -1.1
TNFRSF1A-211ENST00000538363 GNG13Q9P2W3 67 aa8.19□□□□□ -1.1
TNFRSF1A-211ENST00000538363 K7EMT4 169 aa8.18□□□□□ -1.1
TNFRSF1A-211ENST00000538363 OR10J4P0C629 311 aa8.18□□□□□ -1.1
TNFRSF1A-211ENST00000538363 ARL14EPLP0DKL9 152 aa8.18□□□□□ -1.1
TNFRSF1A-211ENST00000538363 PSMB3P49720 205 aa8.18□□□□□ -1.1
TNFRSF1A-211ENST00000538363 UBE2L3P68036 154 aaKnown RBP8.18□□□□□ -1.1
TNFRSF1A-211ENST00000538363 TM4SF20Q53R12 229 aa8.18□□□□□ -1.1
TNFRSF1A-211ENST00000538363 CST9LP1Q5W188 147 aa8.18□□□□□ -1.1
TNFRSF1A-211ENST00000538363 BLNKQ8WV28 456 aa8.18□□□□□ -1.1
TNFRSF1A-211ENST00000538363 MBD3L1Q8WWY6 194 aa8.18□□□□□ -1.1
TNFRSF1A-211ENST00000538363 TMEM190Q8WZ59 177 aa8.18□□□□□ -1.1
TNFRSF1A-211ENST00000538363 RAX2Q96IS3 184 aa8.18□□□□□ -1.1
TNFRSF1A-211ENST00000538363 GPR82Q96P67 336 aa8.18□□□□□ -1.1
TNFRSF1A-211ENST00000538363 SCRT1Q9BWW7 348 aa8.18□□□□□ -1.1
TNFRSF1A-211ENST00000538363 TMEM167BQ9NRX6 74 aa8.18□□□□□ -1.1
TNFRSF1A-211ENST00000538363 IGHV7-4-1A0A0J9YVY3 117 aa8.17□□□□□ -1.1
TNFRSF1A-211ENST00000538363 H3BRN7 92 aa8.17□□□□□ -1.1
TNFRSF1A-211ENST00000538363 LGALS9O00182 355 aa8.17□□□□□ -1.1
TNFRSF1A-211ENST00000538363 OVOL1O14753 267 aa8.17□□□□□ -1.1
TNFRSF1A-211ENST00000538363 NMBP08949 121 aa8.17□□□□□ -1.1
TNFRSF1A-211ENST00000538363 STAG3L2P0CL84 134 aa8.17□□□□□ -1.1
TNFRSF1A-211ENST00000538363 STAG3L3P0CL85 134 aa8.17□□□□□ -1.1
TNFRSF1A-211ENST00000538363 GCHFRP30047 84 aa8.17□□□□□ -1.1
TNFRSF1A-211ENST00000538363 UBE2G2P60604 165 aa8.17□□□□□ -1.1
TNFRSF1A-211ENST00000538363 NDUFA5Q16718 116 aa8.17□□□□□ -1.1
TNFRSF1A-211ENST00000538363 HAGHQ16775 308 aa8.17□□□□□ -1.1
TNFRSF1A-211ENST00000538363 UNQ9165/PRO28630Q6UXU0 137 aa8.17□□□□□ -1.1
TNFRSF1A-211ENST00000538363 REC114Q7Z4M0 266 aa8.17□□□□□ -1.1
TNFRSF1A-211ENST00000538363 SPATA3Q8NHX4 192 aa8.17□□□□□ -1.1
TNFRSF1A-211ENST00000538363 WIPF2Q8TF74 440 aaPredicted RBP8.17□□□□□ -1.1
TNFRSF1A-211ENST00000538363 MARC2Q969Z3 335 aa8.17□□□□□ -1.1
TNFRSF1A-211ENST00000538363 RHPN1-AS1Q9BWJ2 59 aa8.17□□□□□ -1.1
TNFRSF1A-211ENST00000538363 HELTA6NFD8 242 aa8.16□□□□□ -1.1
TNFRSF1A-211ENST00000538363 DNASE2O00115 360 aaPredicted RBP8.16□□□□□ -1.1
TNFRSF1A-211ENST00000538363 SNRPCP09234 159 aaKnown RBP8.16□□□□□ -1.1
TNFRSF1A-211ENST00000538363 CRYBB3P26998 211 aa8.16□□□□□ -1.1
TNFRSF1A-211ENST00000538363 KLF5Q13887 457 aaPredicted RBP8.16□□□□□ -1.1
TNFRSF1A-211ENST00000538363 PEA15Q15121 130 aa8.16□□□□□ -1.1
TNFRSF1A-211ENST00000538363 ZNF726P1Q15940 193 aa8.16□□□□□ -1.1
TNFRSF1A-211ENST00000538363 C1orf194Q5T5A4 169 aa8.16□□□□□ -1.1
TNFRSF1A-211ENST00000538363 DLX4Q92988 240 aaPredicted RBP8.16□□□□□ -1.1
TNFRSF1A-211ENST00000538363 SLC25A2Q9BXI2 301 aa8.16□□□□□ -1.1
TNFRSF1A-211ENST00000538363 TMPRSS5Q9H3S3 457 aa8.16□□□□□ -1.1
TNFRSF1A-211ENST00000538363 TREM1Q9NP99 234 aa8.16□□□□□ -1.1
TNFRSF1A-211ENST00000538363 SMPXQ9UHP9 88 aa8.16□□□□□ -1.1
TNFRSF1A-211ENST00000538363 IGKV3-7A0A075B6H7 116 aa8.15□□□□□ -1.1
TNFRSF1A-211ENST00000538363 TRAV1-1A0A0B4J248 108 aa8.15□□□□□ -1.1
TNFRSF1A-211ENST00000538363 RBFOX3A6NFN3 312 aa8.15□□□□□ -1.1
TNFRSF1A-211ENST00000538363 NBEAP1P0C6P0 100 aa8.15□□□□□ -1.1
TNFRSF1A-211ENST00000538363 PYYP10082 97 aa8.15□□□□□ -1.1
TNFRSF1A-211ENST00000538363 HIST1H1EP10412 219 aaKnown RBP8.15□□□□□ -1.1
TNFRSF1A-211ENST00000538363 FOLR2P14207 255 aa8.15□□□□□ -1.1
TNFRSF1A-211ENST00000538363 TAGLN2P37802 199 aaKnown RBP8.15□□□□□ -1.1
TNFRSF1A-211ENST00000538363 KRTAP10-3P60369 221 aa8.15□□□□□ -1.1
TNFRSF1A-211ENST00000538363 PAFAH1B2P68402 229 aa8.15□□□□□ -1.1
TNFRSF1A-211ENST00000538363 SHISA2Q6UWI4 295 aa8.15□□□□□ -1.1
TNFRSF1A-211ENST00000538363 SIGLEC15Q6ZMC9 328 aa8.15□□□□□ -1.1
TNFRSF1A-211ENST00000538363 RBPMS2Q6ZRY4 209 aaKnown RBP8.15□□□□□ -1.1
TNFRSF1A-211ENST00000538363 SSX7Q7RTT5 188 aa8.15□□□□□ -1.1
TNFRSF1A-211ENST00000538363 COMMD7Q86VX2 200 aa8.15□□□□□ -1.1
TNFRSF1A-211ENST00000538363 OR9G4Q8NGQ1 327 aa8.15□□□□□ -1.1
TNFRSF1A-211ENST00000538363 ZNF747Q9BV97 191 aa8.15□□□□□ -1.1
TNFRSF1A-211ENST00000538363 AAMDCQ9H7C9 122 aa8.15□□□□□ -1.1
TNFRSF1A-211ENST00000538363 MANBALQ9NQG1 85 aa8.15□□□□□ -1.1
TNFRSF1A-211ENST00000538363 TMEM14CQ9P0S9 112 aa8.15□□□□□ -1.1
TNFRSF1A-211ENST00000538363 C2orf70A6NJV1 201 aa8.14□□□□□ -1.11
TNFRSF1A-211ENST00000538363 H3BTX0 84 aa8.14□□□□□ -1.11
TNFRSF1A-211ENST00000538363 BUB3O43684 328 aa8.14□□□□□ -1.11
TNFRSF1A-211ENST00000538363 PAGE4O60829 102 aa8.14□□□□□ -1.11
TNFRSF1A-211ENST00000538363 APOHP02749 345 aaPredicted RBP8.14□□□□□ -1.11
TNFRSF1A-211ENST00000538363 CD5P06127 495 aa8.14□□□□□ -1.11
TNFRSF1A-211ENST00000538363 CBLN1P23435 193 aa8.14□□□□□ -1.11
TNFRSF1A-211ENST00000538363 CEBPGP53567 150 aa8.14□□□□□ -1.11
TNFRSF1A-211ENST00000538363 RANP62826 216 aaKnown RBP8.14□□□□□ -1.11
TNFRSF1A-211ENST00000538363 CCL20P78556 96 aa8.14□□□□□ -1.11
TNFRSF1A-211ENST00000538363 PSG9Q00887 426 aa8.14□□□□□ -1.11
TNFRSF1A-211ENST00000538363 GUK1Q16774 197 aa8.14□□□□□ -1.11
TNFRSF1A-211ENST00000538363 TOR2AQ5JU69 321 aa8.14□□□□□ -1.11
TNFRSF1A-211ENST00000538363 MORN5Q5VZ52 161 aa8.14□□□□□ -1.11
TNFRSF1A-211ENST00000538363 C16orf54Q6UWD8 224 aa8.14□□□□□ -1.11
TNFRSF1A-211ENST00000538363 TCF24Q7RTU0 167 aa8.14□□□□□ -1.11
TNFRSF1A-211ENST00000538363 WFDC3Q8IUB2 231 aa8.14□□□□□ -1.11
TNFRSF1A-211ENST00000538363 CMTM2Q8TAZ6 248 aa8.14□□□□□ -1.11
TNFRSF1A-211ENST00000538363 SELENOKQ9Y6D0 94 aa8.14□□□□□ -1.11
TNFRSF1A-211ENST00000538363 F6UZH7 168 aa8.13□□□□□ -1.11
TNFRSF1A-211ENST00000538363 CHEK1O14757 476 aa8.13□□□□□ -1.11
TNFRSF1A-211ENST00000538363 SAP30O75446 220 aa8.13□□□□□ -1.11
TNFRSF1A-211ENST00000538363 CD33P20138 364 aa8.13□□□□□ -1.11
TNFRSF1A-211ENST00000538363 ID1P41134 155 aa8.13□□□□□ -1.11
TNFRSF1A-211ENST00000538363 CSN1S1P47710 185 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms