RNA–Protein interactions for RNA: ENST00000537556.1

SRGAP1-202, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 2,976 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-202ENST00000537556 UCN2Q96RP3 112 aa6.83□□□□□ -1.32
SRGAP1-202ENST00000537556 U3KQK5 164 aa6.83□□□□□ -1.32
SRGAP1-202ENST00000537556 IGKV1OR2-108A0A075B7D4 117 aa6.82□□□□□ -1.32
SRGAP1-202ENST00000537556 TMSB15BA0A087X1C1 80 aa6.82□□□□□ -1.32
SRGAP1-202ENST00000537556 LINC01549A6NIU2 74 aa6.82□□□□□ -1.32
SRGAP1-202ENST00000537556 FOXF2Q12947 444 aa6.82□□□□□ -1.32
SRGAP1-202ENST00000537556 HES1Q14469 280 aa6.82□□□□□ -1.32
SRGAP1-202ENST00000537556 MRPL23Q16540 153 aaKnown RBP6.82□□□□□ -1.32
SRGAP1-202ENST00000537556 SPRNQ5BIV9 151 aa6.82□□□□□ -1.32
SRGAP1-202ENST00000537556 C10orf113Q5VZT2 155 aa6.82□□□□□ -1.32
SRGAP1-202ENST00000537556 ZNF714Q96N38 554 aa6.82□□□□□ -1.32
SRGAP1-202ENST00000537556 LINC01587Q99440 93 aa6.82□□□□□ -1.32
SRGAP1-202ENST00000537556 TANC2Q9HCD6 1990 aa6.82□□□□□ -1.32
SRGAP1-202ENST00000537556 C2orf16Q68DN1 1984 aa6.82□□□□□ -1.32
SRGAP1-202ENST00000537556 A0A1B0GX51 115 aa6.82□□□□□ -1.32
SRGAP1-202ENST00000537556 LINC00205P59089 165 aa6.82□□□□□ -1.32
SRGAP1-202ENST00000537556 FXYD5Q96DB9 178 aa6.82□□□□□ -1.32
SRGAP1-202ENST00000537556 SPANXDQ9BXN6 97 aa6.82□□□□□ -1.32
SRGAP1-202ENST00000537556 C9JAW5 83 aa6.81□□□□□ -1.32
SRGAP1-202ENST00000537556 MFAP4P55083 255 aa6.81□□□□□ -1.32
SRGAP1-202ENST00000537556 FXYD7P58549 80 aa6.81□□□□□ -1.32
SRGAP1-202ENST00000537556 ZFP2Q6ZN57 461 aa6.81□□□□□ -1.32
SRGAP1-202ENST00000537556 FAM19A5Q7Z5A7 132 aaPredicted RBP6.81□□□□□ -1.32
SRGAP1-202ENST00000537556 VKORC1L1Q8N0U8 176 aa6.81□□□□□ -1.32
SRGAP1-202ENST00000537556 S1PR3Q99500 378 aa6.81□□□□□ -1.32
SRGAP1-202ENST00000537556 TRGV9Q99603 122 aa6.81□□□□□ -1.32
SRGAP1-202ENST00000537556 C21orf62Q9NYP8 219 aa6.81□□□□□ -1.32
SRGAP1-202ENST00000537556 HIGD1AQ9Y241 93 aa6.81□□□□□ -1.32
SRGAP1-202ENST00000537556 FOXA2Q9Y261 457 aaPredicted RBP6.81□□□□□ -1.32
SRGAP1-202ENST00000537556 TRAV3A0A0B4J244 114 aa6.81□□□□□ -1.32
SRGAP1-202ENST00000537556 RPL7P18124 248 aaKnown RBP6.81□□□□□ -1.32
SRGAP1-202ENST00000537556 MORN5Q5VZ52 161 aa6.81□□□□□ -1.32
SRGAP1-202ENST00000537556 MAPKAPK5-AS1Q8N8E1 139 aa6.81□□□□□ -1.32
SRGAP1-202ENST00000537556 C15orf53Q8NAA6 179 aa6.81□□□□□ -1.32
SRGAP1-202ENST00000537556 SRSF12Q8WXF0 261 aaKnown RBP6.81□□□□□ -1.32
SRGAP1-202ENST00000537556 TRAV8-1A0A0A6YYK1 113 aa6.81□□□□□ -1.32
SRGAP1-202ENST00000537556 NPFFO15130 113 aa6.81□□□□□ -1.32
SRGAP1-202ENST00000537556 DUSP14O95147 198 aaKnown RBP6.81□□□□□ -1.32
SRGAP1-202ENST00000537556 FAM104BQ5XKR9 115 aa6.81□□□□□ -1.32
SRGAP1-202ENST00000537556 AAED1Q7RTV5 226 aa6.81□□□□□ -1.32
SRGAP1-202ENST00000537556 WFDC3Q8IUB2 231 aa6.81□□□□□ -1.32
SRGAP1-202ENST00000537556 TMEM160Q9NX00 188 aa6.81□□□□□ -1.32
SRGAP1-202ENST00000537556 IGHV3-20A0A0C4DH32 117 aa6.8□□□□□ -1.32
SRGAP1-202ENST00000537556 IGHG3P01860 377 aa6.8□□□□□ -1.32
SRGAP1-202ENST00000537556 Q6ZQT7 251 aa6.8□□□□□ -1.32
SRGAP1-202ENST00000537556 YAF2Q8IY57 180 aa6.8□□□□□ -1.32
SRGAP1-202ENST00000537556 FOXC2Q99958 501 aa6.8□□□□□ -1.32
SRGAP1-202ENST00000537556 PRADC1Q9BSG0 188 aa6.8□□□□□ -1.32
SRGAP1-202ENST00000537556 TMEM14BQ9NUH8 114 aa6.8□□□□□ -1.32
SRGAP1-202ENST00000537556 SEC16AO15027 2179 aa6.8□□□□□ -1.32
SRGAP1-202ENST00000537556 SLC25A20O43772 301 aa6.8□□□□□ -1.32
SRGAP1-202ENST00000537556 TCRAP04437 139 aa6.8□□□□□ -1.32
SRGAP1-202ENST00000537556 KIR2DL1P43626 348 aaPredicted RBP6.8□□□□□ -1.32
SRGAP1-202ENST00000537556 EMP1P54849 157 aa6.8□□□□□ -1.32
SRGAP1-202ENST00000537556 RPS28P62857 69 aaKnown RBP6.8□□□□□ -1.32
SRGAP1-202ENST00000537556 OR13H1Q8NG92 308 aa6.8□□□□□ -1.32
SRGAP1-202ENST00000537556 OR11H6Q8NGC7 330 aa6.8□□□□□ -1.32
SRGAP1-202ENST00000537556 IGFLR1Q9H665 355 aa6.8□□□□□ -1.32
SRGAP1-202ENST00000537556 PROCRQ9UNN8 238 aa6.8□□□□□ -1.32
SRGAP1-202ENST00000537556 AGRNO00468 2067 aa6.8□□□□□ -1.32
SRGAP1-202ENST00000537556 TRAV8-4A0A0B4J246 113 aa6.79□□□□□ -1.32
SRGAP1-202ENST00000537556 IGHV5-51A0A0C4DH38 117 aa6.79□□□□□ -1.32
SRGAP1-202ENST00000537556 TCL1BO95988 128 aa6.79□□□□□ -1.32
SRGAP1-202ENST00000537556 CXCL10P02778 98 aa6.79□□□□□ -1.32
SRGAP1-202ENST00000537556 CKS2P33552 79 aa6.79□□□□□ -1.32
SRGAP1-202ENST00000537556 AAMDCQ9H7C9 122 aa6.79□□□□□ -1.32
SRGAP1-202ENST00000537556 FZR1Q9UM11 496 aa6.79□□□□□ -1.32
SRGAP1-202ENST00000537556 PCSK5Q92824 1860 aa6.79□□□□□ -1.32
SRGAP1-202ENST00000537556 LOC107984640A0A0U1RRK4 108 aa6.79□□□□□ -1.32
SRGAP1-202ENST00000537556 LINC01548A6NM66 108 aa6.79□□□□□ -1.32
SRGAP1-202ENST00000537556 NDUFA7O95182 113 aa6.79□□□□□ -1.32
SRGAP1-202ENST00000537556 UBE2D1P51668 147 aa6.79□□□□□ -1.32
SRGAP1-202ENST00000537556 FAM53AQ6NSI3 398 aaPredicted RBP6.79□□□□□ -1.32
SRGAP1-202ENST00000537556 TMEM190Q8WZ59 177 aa6.79□□□□□ -1.32
SRGAP1-202ENST00000537556 IFI27L2Q9H2X8 130 aa6.79□□□□□ -1.32
SRGAP1-202ENST00000537556 NOTCH4Q99466 2003 aa6.79□□□□□ -1.32
SRGAP1-202ENST00000537556 ABCA7Q8IZY2 2146 aa6.79□□□□□ -1.32
SRGAP1-202ENST00000537556 TRAV2A0A0B4J234 112 aa6.78□□□□□ -1.32
SRGAP1-202ENST00000537556 TRAV40A0A0B4J280 105 aa6.78□□□□□ -1.32
SRGAP1-202ENST00000537556 SPINT2O43291 252 aa6.78□□□□□ -1.32
SRGAP1-202ENST00000537556 CD69Q07108 199 aa6.78□□□□□ -1.32
SRGAP1-202ENST00000537556 C2orf83Q53S99 150 aa6.78□□□□□ -1.32
SRGAP1-202ENST00000537556 C9orf153Q5TBE3 101 aa6.78□□□□□ -1.32
SRGAP1-202ENST00000537556 RFESDQ8TAC1 157 aa6.78□□□□□ -1.32
SRGAP1-202ENST00000537556 RTL8AQ9BWD3 113 aa6.78□□□□□ -1.32
SRGAP1-202ENST00000537556 ADAMTS20P59510 1910 aa6.78□□□□□ -1.32
SRGAP1-202ENST00000537556 OVOL3O00110 214 aa6.78□□□□□ -1.32
SRGAP1-202ENST00000537556 PLNP26678 52 aa6.78□□□□□ -1.32
SRGAP1-202ENST00000537556 LEPP41159 167 aa6.78□□□□□ -1.32
SRGAP1-202ENST00000537556 SFTA2Q6UW10 78 aa6.78□□□□□ -1.32
SRGAP1-202ENST00000537556 Q86TA4 180 aa6.78□□□□□ -1.32
SRGAP1-202ENST00000537556 C10orf126Q8N4M7 172 aa6.78□□□□□ -1.32
SRGAP1-202ENST00000537556 C3orf56Q8N813 242 aa6.78□□□□□ -1.32
SRGAP1-202ENST00000537556 OR13A1Q8NGR1 328 aa6.78□□□□□ -1.32
SRGAP1-202ENST00000537556 FAM57AQ8TBR7 257 aa6.78□□□□□ -1.32
SRGAP1-202ENST00000537556 MRAPQ8TCY5 172 aa6.78□□□□□ -1.32
SRGAP1-202ENST00000537556 TMEM101Q96IK0 257 aa6.78□□□□□ -1.32
SRGAP1-202ENST00000537556 CHCHD5Q9BSY4 110 aa6.78□□□□□ -1.32
SRGAP1-202ENST00000537556 PRO3102Q9H379 93 aa6.78□□□□□ -1.32
SRGAP1-202ENST00000537556 CALYQ9NYX4 217 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms