RNA–Protein interactions for RNA: ENST00000537435.2

USP44-203, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-203ENST00000537435 IGFBPL1Q8WX77 278 aa11.33□□□□□ -0.6
USP44-203ENST00000537435 C17orf77Q96MU5 243 aa11.33□□□□□ -0.6
USP44-203ENST00000537435 SCNM1Q9BWG6 230 aa11.33□□□□□ -0.6
USP44-203ENST00000537435 CLEC5AQ9NY25 188 aa11.33□□□□□ -0.6
USP44-203ENST00000537435 FAM231BA6NCW3 169 aa11.32□□□□□ -0.6
USP44-203ENST00000537435 K7ENP7 123 aa11.32□□□□□ -0.6
USP44-203ENST00000537435 HOXB4P17483 251 aaPredicted RBP11.32□□□□□ -0.6
USP44-203ENST00000537435 TFPI2P48307 235 aa11.32□□□□□ -0.6
USP44-203ENST00000537435 COL5A1-AS1Q5SY13 56 aa11.32□□□□□ -0.6
USP44-203ENST00000537435 FAM162BQ5T6X4 162 aa11.32□□□□□ -0.6
USP44-203ENST00000537435 BPIFA4PQ86YQ2 179 aa11.32□□□□□ -0.6
USP44-203ENST00000537435 SHANK2-AS3Q9BTD1 123 aa11.32□□□□□ -0.6
USP44-203ENST00000537435 HILPDAQ9Y5L2 63 aa11.32□□□□□ -0.6
USP44-203ENST00000537435 TRBV19A0A075B6N1 114 aa11.32□□□□□ -0.6
USP44-203ENST00000537435 H3BRN7 92 aa11.32□□□□□ -0.6
USP44-203ENST00000537435 CHEK1O14757 476 aa11.32□□□□□ -0.6
USP44-203ENST00000537435 LY6HO94772 140 aa11.32□□□□□ -0.6
USP44-203ENST00000537435 PRB4P10163 310 aaPredicted RBP11.32□□□□□ -0.6
USP44-203ENST00000537435 HTR1DP28221 377 aa11.32□□□□□ -0.6
USP44-203ENST00000537435 SPATA12Q7Z6I5 190 aa11.32□□□□□ -0.6
USP44-203ENST00000537435 LY6G5BQ8NDX9 201 aa11.32□□□□□ -0.6
USP44-203ENST00000537435 TPRP12270 2363 aaKnown RBP11.31□□□□□ -0.6
USP44-203ENST00000537435 NBR2O15453 112 aa11.31□□□□□ -0.6
USP44-203ENST00000537435 ARF6P62330 175 aa11.31□□□□□ -0.6
USP44-203ENST00000537435 OR4F17Q8NGA8 305 aa11.31□□□□□ -0.6
USP44-203ENST00000537435 ASCL2Q99929 193 aa11.31□□□□□ -0.6
USP44-203ENST00000537435 ZZEF1O43149 2961 aa11.31□□□□□ -0.6
USP44-203ENST00000537435 TRAV9-2A0A087WT02 112 aa11.31□□□□□ -0.6
USP44-203ENST00000537435 FAM120AOSQ5T036 256 aa11.31□□□□□ -0.6
USP44-203ENST00000537435 ZNF491Q8N8L2 437 aa11.31□□□□□ -0.6
USP44-203ENST00000537435 DPM3Q9P2X0 92 aa11.31□□□□□ -0.6
USP44-203ENST00000537435 LAMTOR2Q9Y2Q5 125 aa11.31□□□□□ -0.6
USP44-203ENST00000537435 S4R3C0 116 aa11.31□□□□□ -0.6
USP44-203ENST00000537435 LOC102724200A0A096LPH7 203 aaPredicted RBP11.3□□□□□ -0.6
USP44-203ENST00000537435 ZNF785A8K8V0 405 aa11.3□□□□□ -0.6
USP44-203ENST00000537435 APOHP02749 345 aaPredicted RBP11.3□□□□□ -0.6
USP44-203ENST00000537435 IL4P05112 153 aa11.3□□□□□ -0.6
USP44-203ENST00000537435 KLF17Q5JT82 389 aaPredicted RBP11.3□□□□□ -0.6
USP44-203ENST00000537435 C16orf54Q6UWD8 224 aa11.3□□□□□ -0.6
USP44-203ENST00000537435 SIGLEC15Q6ZMC9 328 aa11.3□□□□□ -0.6
USP44-203ENST00000537435 CHCHD1Q96BP2 118 aaKnown RBP11.3□□□□□ -0.6
USP44-203ENST00000537435 RNF125Q96EQ8 232 aa11.3□□□□□ -0.6
USP44-203ENST00000537435 ZC2HC1AQ96GY0 325 aa11.3□□□□□ -0.6
USP44-203ENST00000537435 TMEM70Q9BUB7 260 aa11.3□□□□□ -0.6
USP44-203ENST00000537435 IGHV1-24A0A0C4DH33 117 aa11.3□□□□□ -0.6
USP44-203ENST00000537435 TRBV6-1A0A0K0K1D8 114 aa11.3□□□□□ -0.6
USP44-203ENST00000537435 HLA-DRB1P01911 266 aa11.3□□□□□ -0.6
USP44-203ENST00000537435 KLRD1Q13241 179 aa11.3□□□□□ -0.6
USP44-203ENST00000537435 CFHR4Q92496 578 aa11.3□□□□□ -0.6
USP44-203ENST00000537435 HAX1O00165 279 aa11.29□□□□□ -0.6
USP44-203ENST00000537435 NPSP0C0P6 89 aa11.29□□□□□ -0.6
USP44-203ENST00000537435 IGLL1P15814 213 aa11.29□□□□□ -0.6
USP44-203ENST00000537435 TMEM75Q8N9X5 138 aa11.29□□□□□ -0.6
USP44-203ENST00000537435 NDFIP1Q9BT67 221 aa11.29□□□□□ -0.6
USP44-203ENST00000537435 RNF24Q9Y225 148 aa11.29□□□□□ -0.6
USP44-203ENST00000537435 GOLT1BQ9Y3E0 138 aa11.29□□□□□ -0.6
USP44-203ENST00000537435 PTPRZ1P23471 2315 aaPredicted RBP11.29□□□□□ -0.6
USP44-203ENST00000537435 OVOL3O00110 214 aa11.29□□□□□ -0.6
USP44-203ENST00000537435 LINC00614P0C842 121 aa11.29□□□□□ -0.6
USP44-203ENST00000537435 TSPOP30536 169 aa11.29□□□□□ -0.6
USP44-203ENST00000537435 FCGR2BP31994 310 aaPredicted RBP11.29□□□□□ -0.6
USP44-203ENST00000537435 GAGE1Q13065 139 aa11.29□□□□□ -0.6
USP44-203ENST00000537435 FBLN7Q53RD9 439 aa11.29□□□□□ -0.6
USP44-203ENST00000537435 STPG4Q8N801 248 aa11.29□□□□□ -0.6
USP44-203ENST00000537435 OR11H6Q8NGC7 330 aa11.29□□□□□ -0.6
USP44-203ENST00000537435 PSG8Q9UQ74 426 aa11.29□□□□□ -0.6
USP44-203ENST00000537435 A0A1W2PRD5 423 aa11.28□□□□□ -0.6
USP44-203ENST00000537435 A0A1W2PRF3 423 aa11.28□□□□□ -0.6
USP44-203ENST00000537435 A0A1W2PRM7 423 aa11.28□□□□□ -0.6
USP44-203ENST00000537435 MRPS12O15235 138 aaKnown RBP11.28□□□□□ -0.6
USP44-203ENST00000537435 NDUFA3O95167 84 aa11.28□□□□□ -0.6
USP44-203ENST00000537435 HES1Q14469 280 aa11.28□□□□□ -0.6
USP44-203ENST00000537435 LINC00173Q6ZV60 143 aa11.28□□□□□ -0.6
USP44-203ENST00000537435 NPBQ8NG41 125 aa11.28□□□□□ -0.6
USP44-203ENST00000537435 ZFP30Q9Y2G7 519 aa11.28□□□□□ -0.6
USP44-203ENST00000537435 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.28□□□□□ -0.6
USP44-203ENST00000537435 C20orf202A1L168 122 aa11.28□□□□□ -0.6
USP44-203ENST00000537435 K7EQM0 130 aa11.28□□□□□ -0.6
USP44-203ENST00000537435 FBXL19-AS1Q494R0 122 aa11.28□□□□□ -0.6
USP44-203ENST00000537435 BCL6BQ8N143 479 aaPredicted RBP11.28□□□□□ -0.6
USP44-203ENST00000537435 LYPD1Q8N2G4 141 aa11.28□□□□□ -0.6
USP44-203ENST00000537435 ZNF414Q96IQ9 312 aa11.28□□□□□ -0.6
USP44-203ENST00000537435 WI2-2373I1.2A0A1W2PRP0 233 aa11.27□□□□□ -0.61
USP44-203ENST00000537435 M0R3E3 92 aa11.27□□□□□ -0.61
USP44-203ENST00000537435 GNG7O60262 68 aa11.27□□□□□ -0.61
USP44-203ENST00000537435 LEPROTL1O95214 131 aa11.27□□□□□ -0.61
USP44-203ENST00000537435 FOSL1P15407 271 aa11.27□□□□□ -0.61
USP44-203ENST00000537435 CEACAM3P40198 252 aa11.27□□□□□ -0.61
USP44-203ENST00000537435 PSG3Q16557 428 aa11.27□□□□□ -0.61
USP44-203ENST00000537435 A0A1B0GUT8 65 aa11.27□□□□□ -0.61
USP44-203ENST00000537435 OR4C46A6NHA9 309 aa11.27□□□□□ -0.61
USP44-203ENST00000537435 ARMS2P0C7Q2 107 aa11.27□□□□□ -0.61
USP44-203ENST00000537435 ZNF138P52744 262 aa11.27□□□□□ -0.61
USP44-203ENST00000537435 RAB1BQ9H0U4 201 aa11.27□□□□□ -0.61
USP44-203ENST00000537435 SYS1-DBNDD2H3BUS1 97 aa11.26□□□□□ -0.61
USP44-203ENST00000537435 CCL21O00585 134 aa11.26□□□□□ -0.61
USP44-203ENST00000537435 CRXO43186 299 aaPredicted RBP11.26□□□□□ -0.61
USP44-203ENST00000537435 C5orf64Q2M2E5 130 aa11.26□□□□□ -0.61
USP44-203ENST00000537435 TMEM190Q8WZ59 177 aa11.26□□□□□ -0.61
USP44-203ENST00000537435 TIMD4Q96H15 378 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 236.8 ms