RNA–Protein interactions for RNA: ENST00000536710.1

PRKDC-208, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 4

Gene PRKDC, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-208ENST00000536710 SLC30A7Q8NEW0 376 aa1.8□□□□□ -2.12
PRKDC-208ENST00000536710 SFT2D1Q8WV19 159 aa1.8□□□□□ -2.12
PRKDC-208ENST00000536710 PRADC1Q9BSG0 188 aa1.8□□□□□ -2.12
PRKDC-208ENST00000536710 BCL2L10Q9HD36 194 aa1.8□□□□□ -2.12
PRKDC-208ENST00000536710 HS3ST2Q9Y278 367 aa1.8□□□□□ -2.12
PRKDC-208ENST00000536710 CCNB3Q8WWL7 1395 aa1.8□□□□□ -2.12
PRKDC-208ENST00000536710 MYOM3Q5VTT5 1437 aa1.8□□□□□ -2.12
PRKDC-208ENST00000536710 ERBINQ96RT1 1412 aa1.8□□□□□ -2.12
PRKDC-208ENST00000536710 DIP2AQ14689 1571 aa1.8□□□□□ -2.12
PRKDC-208ENST00000536710 NHSL1Q5SYE7 1610 aa1.8□□□□□ -2.12
PRKDC-208ENST00000536710 SHPRHQ149N8 1683 aa1.8□□□□□ -2.12
PRKDC-208ENST00000536710 ROBO1Q9Y6N7 1651 aa1.8□□□□□ -2.12
PRKDC-208ENST00000536710 SPHKAPQ2M3C7 1700 aa1.8□□□□□ -2.12
PRKDC-208ENST00000536710 IFT172Q9UG01 1749 aa1.8□□□□□ -2.12
PRKDC-208ENST00000536710 SRCAPQ6ZRS2 3230 aa1.79□□□□□ -2.12
PRKDC-208ENST00000536710 CCDC88CQ9P219 2028 aa1.79□□□□□ -2.12
PRKDC-208ENST00000536710 G3V2T6 193 aa1.79□□□□□ -2.12
PRKDC-208ENST00000536710 HCRTO43612 131 aa1.79□□□□□ -2.12
PRKDC-208ENST00000536710 BANF1O75531 89 aa1.79□□□□□ -2.12
PRKDC-208ENST00000536710 DYNLT1P63172 113 aa1.79□□□□□ -2.12
PRKDC-208ENST00000536710 OR10J5Q8NHC4 309 aa1.79□□□□□ -2.12
PRKDC-208ENST00000536710 MED29Q9NX70 200 aa1.79□□□□□ -2.12
PRKDC-208ENST00000536710 PYCARDQ9ULZ3 195 aa1.79□□□□□ -2.12
PRKDC-208ENST00000536710 ABCC5O15440 1437 aa1.79□□□□□ -2.12
PRKDC-208ENST00000536710 NALCNQ8IZF0 1738 aa1.79□□□□□ -2.12
PRKDC-208ENST00000536710 SIPA1L2Q9P2F8 1722 aaPredicted RBP1.79□□□□□ -2.12
PRKDC-208ENST00000536710 MARF1Q9Y4F3 1742 aaKnown RBP1.79□□□□□ -2.12
PRKDC-208ENST00000536710 HEATR5AQ86XA9 2040 aa1.79□□□□□ -2.12
PRKDC-208ENST00000536710 PPLO60437 1756 aa1.78□□□□□ -2.12
PRKDC-208ENST00000536710 PHLPP1O60346 1717 aa1.78□□□□□ -2.12
PRKDC-208ENST00000536710 SETBP1Q9Y6X0 1596 aa1.78□□□□□ -2.12
PRKDC-208ENST00000536710 NKTRP30414 1462 aaKnown RBP1.78□□□□□ -2.12
PRKDC-208ENST00000536710 DAPK1P53355 1430 aa1.78□□□□□ -2.12
PRKDC-208ENST00000536710 FGD6Q6ZV73 1430 aa1.78□□□□□ -2.12
PRKDC-208ENST00000536710 TRGV10A0A0A0MS01 117 aa1.78□□□□□ -2.12
PRKDC-208ENST00000536710 TAX1BP3O14907 124 aa1.78□□□□□ -2.12
PRKDC-208ENST00000536710 GADD45GO95257 159 aa1.78□□□□□ -2.12
PRKDC-208ENST00000536710 NDUFC2O95298 119 aa1.78□□□□□ -2.12
PRKDC-208ENST00000536710 RNASE4P34096 147 aaKnown RBP1.78□□□□□ -2.12
PRKDC-208ENST00000536710 RPL19P84098 196 aaKnown RBP1.78□□□□□ -2.12
PRKDC-208ENST00000536710 PDE6HQ13956 83 aa1.78□□□□□ -2.12
PRKDC-208ENST00000536710 AP3S1Q92572 193 aa1.78□□□□□ -2.12
PRKDC-208ENST00000536710 YPEL2Q96QA6 119 aa1.78□□□□□ -2.12
PRKDC-208ENST00000536710 KLK9Q9UKQ9 250 aa1.78□□□□□ -2.12
PRKDC-208ENST00000536710 KIF1BO60333 1816 aa1.77□□□□□ -2.13
PRKDC-208ENST00000536710 KNDC1Q76NI1 1749 aa1.77□□□□□ -2.13
PRKDC-208ENST00000536710 RTTNQ86VV8 2226 aa1.77□□□□□ -2.13
PRKDC-208ENST00000536710 HYPMO75409 117 aa1.77□□□□□ -2.13
PRKDC-208ENST00000536710 LYZL6O75951 148 aa1.77□□□□□ -2.13
PRKDC-208ENST00000536710 ZNF93P35789 620 aaPredicted RBP1.77□□□□□ -2.13
PRKDC-208ENST00000536710 SOSTDC1Q6X4U4 206 aa1.77□□□□□ -2.13
PRKDC-208ENST00000536710 TEX47Q8TBZ9 253 aa1.77□□□□□ -2.13
PRKDC-208ENST00000536710 RETNLBQ9BQ08 111 aa1.77□□□□□ -2.13
PRKDC-208ENST00000536710 ACER3Q9NUN7 267 aa1.77□□□□□ -2.13
PRKDC-208ENST00000536710 ABCA3Q99758 1704 aa1.77□□□□□ -2.13
PRKDC-208ENST00000536710 CRYBG1Q9Y4K1 1723 aa1.77□□□□□ -2.13
PRKDC-208ENST00000536710 CLTCL1P53675 1640 aa1.77□□□□□ -2.13
PRKDC-208ENST00000536710 TRPM2O94759 1503 aa1.76□□□□□ -2.13
PRKDC-208ENST00000536710 NEXMIFQ5QGS0 1516 aa1.76□□□□□ -2.13
PRKDC-208ENST00000536710 FAM135BQ49AJ0 1406 aa1.76□□□□□ -2.13
PRKDC-208ENST00000536710 TMEM2Q9UHN6 1383 aa1.76□□□□□ -2.13
PRKDC-208ENST00000536710 TRAV12-1A0A0B4J245 112 aa1.76□□□□□ -2.13
PRKDC-208ENST00000536710 NDUFB3O43676 98 aa1.76□□□□□ -2.13
PRKDC-208ENST00000536710 TIMM17BO60830 172 aa1.76□□□□□ -2.13
PRKDC-208ENST00000536710 C1QBP02746 253 aa1.76□□□□□ -2.13
PRKDC-208ENST00000536710 GNG5P63218 68 aa1.76□□□□□ -2.13
PRKDC-208ENST00000536710 DEFB113Q30KQ7 82 aa1.76□□□□□ -2.13
PRKDC-208ENST00000536710 TMED4Q7Z7H5 227 aa1.76□□□□□ -2.13
PRKDC-208ENST00000536710 PDZD9Q8IXQ8 264 aa1.76□□□□□ -2.13
PRKDC-208ENST00000536710 RGPD8O14715 1765 aaPredicted RBP1.76□□□□□ -2.13
PRKDC-208ENST00000536710 LRP6O75581 1613 aa1.76□□□□□ -2.13
PRKDC-208ENST00000536710 NCOA3Q9Y6Q9 1424 aa1.75□□□□□ -2.13
PRKDC-208ENST00000536710 ECM29Q5VYK3 1845 aa1.75□□□□□ -2.13
PRKDC-208ENST00000536710 BAZ2BQ9UIF8 2168 aaKnown RBP1.75□□□□□ -2.13
PRKDC-208ENST00000536710 ROCK1Q13464 1354 aa1.75□□□□□ -2.13
PRKDC-208ENST00000536710 FMN2Q9NZ56 1722 aa1.75□□□□□ -2.13
PRKDC-208ENST00000536710 MUC6Q6W4X9 2439 aa1.75□□□□□ -2.13
PRKDC-208ENST00000536710 TRBV6-8A0A0A6YYG3 113 aa1.75□□□□□ -2.13
PRKDC-208ENST00000536710 ARL14EPLP0DKL9 152 aa1.75□□□□□ -2.13
PRKDC-208ENST00000536710 AKR1C8PQ5T2L2 129 aa1.75□□□□□ -2.13
PRKDC-208ENST00000536710 C22orf39Q6P5X5 142 aa1.75□□□□□ -2.13
PRKDC-208ENST00000536710 CLECL1Q8IZS7 167 aa1.75□□□□□ -2.13
PRKDC-208ENST00000536710 C14orf132Q9NPU4 83 aa1.75□□□□□ -2.13
PRKDC-208ENST00000536710 PRNDQ9UKY0 176 aa1.75□□□□□ -2.13
PRKDC-208ENST00000536710 MYH11P35749 1972 aa1.75□□□□□ -2.13
PRKDC-208ENST00000536710 CDC42BPGQ6DT37 1551 aa1.75□□□□□ -2.13
PRKDC-208ENST00000536710 ASXL1Q8IXJ9 1541 aa1.75□□□□□ -2.13
PRKDC-208ENST00000536710 ANKRD50Q9ULJ7 1429 aa1.74□□□□□ -2.13
PRKDC-208ENST00000536710 ANKRD30AQ9BXX3 1397 aa1.74□□□□□ -2.13
PRKDC-208ENST00000536710 PLCH1Q4KWH8 1693 aa1.74□□□□□ -2.13
PRKDC-208ENST00000536710 SCN10AQ9Y5Y9 1956 aa1.74□□□□□ -2.13
PRKDC-208ENST00000536710 USP32Q8NFA0 1604 aa1.74□□□□□ -2.13
PRKDC-208ENST00000536710 A0A087WX48 190 aa1.74□□□□□ -2.13
PRKDC-208ENST00000536710 IGKV2D-26A0A0A0MRZ7 120 aa1.74□□□□□ -2.13
PRKDC-208ENST00000536710 AIPO00170 330 aa1.74□□□□□ -2.13
PRKDC-208ENST00000536710 GEMIN2O14893 280 aaKnown RBP1.74□□□□□ -2.13
PRKDC-208ENST00000536710 IFNA1P01562 189 aa1.74□□□□□ -2.13
PRKDC-208ENST00000536710 UBE2BP63146 152 aa1.74□□□□□ -2.13
PRKDC-208ENST00000536710 C3orf56Q8N813 242 aa1.74□□□□□ -2.13
PRKDC-208ENST00000536710 OR2T35Q8NGX2 323 aa1.74□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms