RNA–Protein interactions for RNA: ENST00000536634.5

CLIP1-207, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-207ENST00000536634 SPIN2AQ99865 258 aa3.49□□□□□ -1.85
CLIP1-207ENST00000536634 SPIN2BQ9BPZ2 258 aa3.49□□□□□ -1.85
CLIP1-207ENST00000536634 MND1Q9BWT6 205 aa3.49□□□□□ -1.85
CLIP1-207ENST00000536634 TREM1Q9NP99 234 aa3.49□□□□□ -1.85
CLIP1-207ENST00000536634 SDHAF2Q9NX18 166 aa3.49□□□□□ -1.85
CLIP1-207ENST00000536634 ZNF257Q9Y2Q1 563 aa3.49□□□□□ -1.85
CLIP1-207ENST00000536634 UFC1Q9Y3C8 167 aa3.49□□□□□ -1.85
CLIP1-207ENST00000536634 TNXBP22105 4242 aa3.48□□□□□ -1.85
CLIP1-207ENST00000536634 IGLV8-61A0A075B6I0 122 aa3.48□□□□□ -1.85
CLIP1-207ENST00000536634 IGLV11-55A0A075B6I3 123 aa3.48□□□□□ -1.85
CLIP1-207ENST00000536634 XKRY2A2RUG3 117 aa3.48□□□□□ -1.85
CLIP1-207ENST00000536634 DNASE2O00115 360 aaPredicted RBP3.48□□□□□ -1.85
CLIP1-207ENST00000536634 MED6O75586 246 aa3.48□□□□□ -1.85
CLIP1-207ENST00000536634 EIF3GO75821 320 aaKnown RBP eCLIP3.48□□□□□ -1.85
CLIP1-207ENST00000536634 IFNA21P01568 189 aa3.48□□□□□ -1.85
CLIP1-207ENST00000536634 IFNA17P01571 189 aa3.48□□□□□ -1.85
CLIP1-207ENST00000536634 C1QBP02746 253 aa3.48□□□□□ -1.85
CLIP1-207ENST00000536634 CD2P06729 351 aa3.48□□□□□ -1.85
CLIP1-207ENST00000536634 CRYGCP07315 174 aa3.48□□□□□ -1.85
CLIP1-207ENST00000536634 CD3GP09693 182 aa3.48□□□□□ -1.85
CLIP1-207ENST00000536634 MIFP14174 115 aa3.48□□□□□ -1.85
CLIP1-207ENST00000536634 CD36P16671 472 aa3.48□□□□□ -1.85
CLIP1-207ENST00000536634 PSMB6P28072 239 aa3.48□□□□□ -1.85
CLIP1-207ENST00000536634 HTR2CP28335 458 aa3.48□□□□□ -1.85
CLIP1-207ENST00000536634 KLK9Q2XQG4 91 aa3.48□□□□□ -1.85
CLIP1-207ENST00000536634 VMA21Q3ZAQ7 101 aa3.48□□□□□ -1.85
CLIP1-207ENST00000536634 OR2B11Q5JQS5 317 aa3.48□□□□□ -1.85
CLIP1-207ENST00000536634 DNLZQ5SXM8 178 aa3.48□□□□□ -1.85
CLIP1-207ENST00000536634 GPR107Q5VW38 600 aa3.48□□□□□ -1.85
CLIP1-207ENST00000536634 LAMTOR1Q6IAA8 161 aa3.48□□□□□ -1.85
CLIP1-207ENST00000536634 COMMD7Q86VX2 200 aa3.48□□□□□ -1.85
CLIP1-207ENST00000536634 VKORC1L1Q8N0U8 176 aa3.48□□□□□ -1.85
CLIP1-207ENST00000536634 JAGN1Q8N5M9 183 aa3.48□□□□□ -1.85
CLIP1-207ENST00000536634 FAM24BQ8N5W8 94 aa3.48□□□□□ -1.85
CLIP1-207ENST00000536634 ZNF502Q8TBZ5 544 aa3.48□□□□□ -1.85
CLIP1-207ENST00000536634 SFT2D1Q8WV19 159 aa3.48□□□□□ -1.85
CLIP1-207ENST00000536634 DEDD2Q8WXF8 326 aa3.48□□□□□ -1.85
CLIP1-207ENST00000536634 RBPMSQ93062 196 aaKnown RBP3.48□□□□□ -1.85
CLIP1-207ENST00000536634 NICN1Q9BSH3 213 aa3.48□□□□□ -1.85
CLIP1-207ENST00000536634 GABARAPL3Q9BY60 117 aa3.48□□□□□ -1.85
CLIP1-207ENST00000536634 GABARAPL1Q9H0R8 117 aa3.48□□□□□ -1.85
CLIP1-207ENST00000536634 OR2D2Q9H210 308 aa3.48□□□□□ -1.85
CLIP1-207ENST00000536634 NIT2Q9NQR4 276 aa3.48□□□□□ -1.85
CLIP1-207ENST00000536634 DAZ1Q9NQZ3 744 aaKnown RBP3.48□□□□□ -1.85
CLIP1-207ENST00000536634 RDH8Q9NYR8 311 aa3.48□□□□□ -1.85
CLIP1-207ENST00000536634 KLK9Q9UKQ9 250 aa3.48□□□□□ -1.85
CLIP1-207ENST00000536634 IGHV3-49A0A0A0MS15 119 aa3.47□□□□□ -1.85
CLIP1-207ENST00000536634 TRBV6-6A0A0A6YYG2 114 aa3.47□□□□□ -1.85
CLIP1-207ENST00000536634 TRBV7-1A0A0A6YYK4 115 aa3.47□□□□□ -1.85
CLIP1-207ENST00000536634 SERTM2A0A1B0GWG4 89 aa3.47□□□□□ -1.85
CLIP1-207ENST00000536634 TCRBV3S1A0A5B6 114 aa3.47□□□□□ -1.85
CLIP1-207ENST00000536634 OR2T8A6NH00 312 aa3.47□□□□□ -1.85
CLIP1-207ENST00000536634 G3V2T6 193 aa3.47□□□□□ -1.85
CLIP1-207ENST00000536634 TGOLN2O43493 480 aa3.47□□□□□ -1.85
CLIP1-207ENST00000536634 DIRAS3O95661 229 aa3.47□□□□□ -1.85
CLIP1-207ENST00000536634 LALBAP00709 142 aa3.47□□□□□ -1.85
CLIP1-207ENST00000536634 ZNF735P0CB33 412 aa3.47□□□□□ -1.85
CLIP1-207ENST00000536634 FUSP35637 526 aaKnown RBP eCLIP3.47□□□□□ -1.85
CLIP1-207ENST00000536634 TAGLN2P37802 199 aaKnown RBP3.47□□□□□ -1.85
CLIP1-207ENST00000536634 SERPINB10P48595 397 aa3.47□□□□□ -1.85
CLIP1-207ENST00000536634 NUTF2P61970 127 aaKnown RBP3.47□□□□□ -1.85
CLIP1-207ENST00000536634 RPS11P62280 158 aaKnown RBP eCLIP3.47□□□□□ -1.85
CLIP1-207ENST00000536634 SNRPGP62308 76 aaKnown RBP3.47□□□□□ -1.85
CLIP1-207ENST00000536634 FGL1Q08830 312 aa3.47□□□□□ -1.85
CLIP1-207ENST00000536634 RTL8BQ17RB0 113 aa3.47□□□□□ -1.85
CLIP1-207ENST00000536634 OR2G6Q5TZ20 316 aa3.47□□□□□ -1.85
CLIP1-207ENST00000536634 GLT8D1Q68CQ7 371 aa3.47□□□□□ -1.85
CLIP1-207ENST00000536634 PLET1Q6UQ28 207 aa3.47□□□□□ -1.85
CLIP1-207ENST00000536634 MOB1BQ7L9L4 216 aa3.47□□□□□ -1.85
CLIP1-207ENST00000536634 C6orf223Q8N319 242 aa3.47□□□□□ -1.85
CLIP1-207ENST00000536634 ZNF436-AS1Q8NC38 126 aaPredicted RBP3.47□□□□□ -1.85
CLIP1-207ENST00000536634 C14orf144Q96I85 54 aa3.47□□□□□ -1.85
CLIP1-207ENST00000536634 THTPAQ9BU02 230 aa3.47□□□□□ -1.85
CLIP1-207ENST00000536634 PARD6GQ9BYG4 376 aaPredicted RBP3.47□□□□□ -1.85
CLIP1-207ENST00000536634 SLC2A9Q9NRM0 540 aa3.47□□□□□ -1.85
CLIP1-207ENST00000536634 MCUBQ9NWR8 336 aa3.47□□□□□ -1.85
CLIP1-207ENST00000536634 COPZ2Q9P299 210 aa3.47□□□□□ -1.85
CLIP1-207ENST00000536634 AK3Q9UIJ7 227 aa3.47□□□□□ -1.85
CLIP1-207ENST00000536634 PUS1Q9Y606 427 aaKnown RBP eCLIP3.47□□□□□ -1.85
CLIP1-207ENST00000536634 IGHV3-21A0A0B4J1V1 117 aa3.46□□□□□ -1.86
CLIP1-207ENST00000536634 NBDYA0A0U1RRE5 68 aa3.46□□□□□ -1.86
CLIP1-207ENST00000536634 FAM231BA6NCW3 169 aa3.46□□□□□ -1.86
CLIP1-207ENST00000536634 SULT1C2O00338 296 aa3.46□□□□□ -1.86
CLIP1-207ENST00000536634 MRPS14O60783 128 aaKnown RBP3.46□□□□□ -1.86
CLIP1-207ENST00000536634 LIMS3P0CW19 117 aa3.46□□□□□ -1.86
CLIP1-207ENST00000536634 LIMS4P0CW20 117 aa3.46□□□□□ -1.86
CLIP1-207ENST00000536634 CDKN1BP46527 198 aa3.46□□□□□ -1.86
CLIP1-207ENST00000536634 RPL27AP46776 148 aaKnown RBP3.46□□□□□ -1.86
CLIP1-207ENST00000536634 CNN1P51911 297 aaKnown RBP3.46□□□□□ -1.86
CLIP1-207ENST00000536634 DEFA1P59665 94 aa3.46□□□□□ -1.86
CLIP1-207ENST00000536634 DEFA3P59666 94 aa3.46□□□□□ -1.86
CLIP1-207ENST00000536634 DEFB131AP59861 70 aa3.46□□□□□ -1.86
CLIP1-207ENST00000536634 UNC119Q13432 240 aa3.46□□□□□ -1.86
CLIP1-207ENST00000536634 LYPD1Q8N2G4 141 aa3.46□□□□□ -1.86
CLIP1-207ENST00000536634 C9orf62Q8N4C0 152 aa3.46□□□□□ -1.86
CLIP1-207ENST00000536634 OR52I1Q8NGK6 324 aa3.46□□□□□ -1.86
CLIP1-207ENST00000536634 TMEM37Q8WXS4 190 aa3.46□□□□□ -1.86
CLIP1-207ENST00000536634 MAFIPQ8WZ33 124 aa3.46□□□□□ -1.86
CLIP1-207ENST00000536634 SMIM19Q96E16 107 aa3.46□□□□□ -1.86
CLIP1-207ENST00000536634 PFDN5Q99471 154 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms