RNA–Protein interactions for RNA: ENST00000535659.6

CNN1-202, Transcript of calponin 1, humanhuman

TSL 2 BASIC

Gene CNN1, Length 1,527 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-202ENST00000535659 TRAV25A0A0B4J276 109 aa11.74□□□□□ -0.53
CNN1-202ENST00000535659 HELTA6NFD8 242 aa11.74□□□□□ -0.53
CNN1-202ENST00000535659 RAB2AP61019 212 aa11.74□□□□□ -0.53
CNN1-202ENST00000535659 RHOBP62745 196 aa11.74□□□□□ -0.53
CNN1-202ENST00000535659 RPL11P62913 178 aaKnown RBP11.74□□□□□ -0.53
CNN1-202ENST00000535659 DNAH3Q8TD57 4116 aa11.74□□□□□ -0.53
CNN1-202ENST00000535659 TRAV5A0A0B4J249 113 aa11.73□□□□□ -0.53
CNN1-202ENST00000535659 IZUMO1RA6ND01 250 aa11.73□□□□□ -0.53
CNN1-202ENST00000535659 TMEM41BQ5BJD5 291 aa11.73□□□□□ -0.53
CNN1-202ENST00000535659 EIF5AL1Q6IS14 154 aaKnown RBP11.73□□□□□ -0.53
CNN1-202ENST00000535659 LCN12Q6JVE5 192 aa11.73□□□□□ -0.53
CNN1-202ENST00000535659 SIGLEC15Q6ZMC9 328 aa11.73□□□□□ -0.53
CNN1-202ENST00000535659 TMEM61Q8N0U2 210 aa11.73□□□□□ -0.53
CNN1-202ENST00000535659 RPP25LQ8N5L8 163 aaKnown RBP11.73□□□□□ -0.53
CNN1-202ENST00000535659 GPR82Q96P67 336 aa11.73□□□□□ -0.53
CNN1-202ENST00000535659 MRPL32Q9BYC8 188 aaKnown RBP11.73□□□□□ -0.53
CNN1-202ENST00000535659 RPRMQ9NS64 109 aa11.73□□□□□ -0.53
CNN1-202ENST00000535659 FUT9Q9Y231 359 aa11.73□□□□□ -0.53
CNN1-202ENST00000535659 A0A1W2PPV4 95 aa11.72□□□□□ -0.53
CNN1-202ENST00000535659 G3V4G9 280 aa11.72□□□□□ -0.53
CNN1-202ENST00000535659 TSPAN4O14817 238 aa11.72□□□□□ -0.53
CNN1-202ENST00000535659 RPL7P18124 248 aaKnown RBP11.72□□□□□ -0.53
CNN1-202ENST00000535659 AKR1C8PQ5T2L2 129 aa11.72□□□□□ -0.53
CNN1-202ENST00000535659 SAMD5Q5TGI4 173 aa11.72□□□□□ -0.53
CNN1-202ENST00000535659 SPATA31B1PQ5VZV4 182 aa11.72□□□□□ -0.53
CNN1-202ENST00000535659 MIR17HGQ75NE6 70 aa11.72□□□□□ -0.53
CNN1-202ENST00000535659 TMED6Q8WW62 240 aa11.72□□□□□ -0.53
CNN1-202ENST00000535659 PLA2G2EQ9NZK7 142 aa11.72□□□□□ -0.53
CNN1-202ENST00000535659 ZNF785A8K8V0 405 aa11.71□□□□□ -0.53
CNN1-202ENST00000535659 GALR1P47211 349 aa11.71□□□□□ -0.53
CNN1-202ENST00000535659 PAFAH1B2P68402 229 aa11.71□□□□□ -0.53
CNN1-202ENST00000535659 FAM122CQ6P4D5 195 aa11.71□□□□□ -0.53
CNN1-202ENST00000535659 BPIFA4PQ86YQ2 179 aa11.71□□□□□ -0.53
CNN1-202ENST00000535659 ZMAT5Q9UDW3 170 aaKnown RBP11.71□□□□□ -0.53
CNN1-202ENST00000535659 SMAD5-AS1Q9Y6J3 95 aa11.71□□□□□ -0.53
CNN1-202ENST00000535659 IGKV3-7A0A075B6H7 116 aa11.7□□□□□ -0.54
CNN1-202ENST00000535659 UMAD1C9J7I0 102 aa11.7□□□□□ -0.54
CNN1-202ENST00000535659 GUCA2BQ16661 112 aa11.7□□□□□ -0.54
CNN1-202ENST00000535659 SPAG8Q99932 426 aaPredicted RBP11.7□□□□□ -0.54
CNN1-202ENST00000535659 ACTR3CQ9C0K3 210 aaPredicted RBP11.7□□□□□ -0.54
CNN1-202ENST00000535659 MGAM2Q2M2H8 2515 aa11.7□□□□□ -0.54
CNN1-202ENST00000535659 DNASE2O00115 360 aaPredicted RBP11.7□□□□□ -0.54
CNN1-202ENST00000535659 MRPS12O15235 138 aaKnown RBP11.7□□□□□ -0.54
CNN1-202ENST00000535659 CDC34P49427 236 aaPredicted RBP11.7□□□□□ -0.54
CNN1-202ENST00000535659 EGFEM1PQ0D2K5 195 aa11.7□□□□□ -0.54
CNN1-202ENST00000535659 GBGT1Q8N5D6 347 aa11.7□□□□□ -0.54
CNN1-202ENST00000535659 RAB24Q969Q5 203 aa11.7□□□□□ -0.54
CNN1-202ENST00000535659 FAM167A-AS1Q96KT0 104 aa11.7□□□□□ -0.54
CNN1-202ENST00000535659 SLC25A2Q9BXI2 301 aa11.7□□□□□ -0.54
CNN1-202ENST00000535659 MS4A6AQ9H2W1 248 aa11.7□□□□□ -0.54
CNN1-202ENST00000535659 TAS2R45P59539 299 aa11.69□□□□□ -0.54
CNN1-202ENST00000535659 WFDC3Q8IUB2 231 aa11.69□□□□□ -0.54
CNN1-202ENST00000535659 STXBP6Q8NFX7 210 aa11.69□□□□□ -0.54
CNN1-202ENST00000535659 PHYHIPLQ96FC7 376 aa11.69□□□□□ -0.54
CNN1-202ENST00000535659 NRN1Q9NPD7 142 aa11.69□□□□□ -0.54
CNN1-202ENST00000535659 TMEM14CQ9P0S9 112 aa11.69□□□□□ -0.54
CNN1-202ENST00000535659 EIF3GO75821 320 aaKnown RBP eCLIP11.68□□□□□ -0.54
CNN1-202ENST00000535659 ATF4P18848 351 aaPredicted RBP11.68□□□□□ -0.54
CNN1-202ENST00000535659 TFPI2P48307 235 aa11.68□□□□□ -0.54
CNN1-202ENST00000535659 KRTAP10-11P60412 298 aa11.68□□□□□ -0.54
CNN1-202ENST00000535659 C17orf77Q96MU5 243 aa11.68□□□□□ -0.54
CNN1-202ENST00000535659 OR51M1Q9H341 326 aa11.68□□□□□ -0.54
CNN1-202ENST00000535659 TRAV2A0A0B4J234 112 aa11.67□□□□□ -0.54
CNN1-202ENST00000535659 OR4C46A6NHA9 309 aa11.67□□□□□ -0.54
CNN1-202ENST00000535659 HMGB3O15347 200 aaKnown RBP11.67□□□□□ -0.54
CNN1-202ENST00000535659 STAG3L2P0CL84 134 aa11.67□□□□□ -0.54
CNN1-202ENST00000535659 STAG3L3P0CL85 134 aa11.67□□□□□ -0.54
CNN1-202ENST00000535659 GP9P14770 177 aa11.67□□□□□ -0.54
CNN1-202ENST00000535659 RAB5CP51148 216 aa11.67□□□□□ -0.54
CNN1-202ENST00000535659 BEAN1Q3B7T3 259 aa11.67□□□□□ -0.54
CNN1-202ENST00000535659 KHDC3LQ587J8 217 aa11.67□□□□□ -0.54
CNN1-202ENST00000535659 DPPA3Q6W0C5 159 aa11.67□□□□□ -0.54
CNN1-202ENST00000535659 DCANP1Q8TF63 244 aa11.67□□□□□ -0.54
CNN1-202ENST00000535659 PAXXQ9BUH6 204 aa11.67□□□□□ -0.54
CNN1-202ENST00000535659 ZNF256Q9Y2P7 627 aaPredicted RBP11.67□□□□□ -0.54
CNN1-202ENST00000535659 A0A087X0K7 114 aa11.66□□□□□ -0.54
CNN1-202ENST00000535659 CTXND1A0A1B0GTU2 59 aa11.66□□□□□ -0.54
CNN1-202ENST00000535659 K7EQG2 157 aa11.66□□□□□ -0.54
CNN1-202ENST00000535659 OR7C2O60412 319 aa11.66□□□□□ -0.54
CNN1-202ENST00000535659 IGLC2P0DOY2 106 aa11.66□□□□□ -0.54
CNN1-202ENST00000535659 PYYP10082 97 aa11.66□□□□□ -0.54
CNN1-202ENST00000535659 HIST1H1EP10412 219 aaKnown RBP11.66□□□□□ -0.54
CNN1-202ENST00000535659 FHITP49789 147 aa11.66□□□□□ -0.54
CNN1-202ENST00000535659 MEOX2P50222 304 aa11.66□□□□□ -0.54
CNN1-202ENST00000535659 SULT1A2P50226 295 aa11.66□□□□□ -0.54
CNN1-202ENST00000535659 ZNF726P1Q15940 193 aa11.66□□□□□ -0.54
CNN1-202ENST00000535659 ZNF503Q96F45 646 aa11.66□□□□□ -0.54
CNN1-202ENST00000535659 HRH4Q9H3N8 390 aa11.66□□□□□ -0.54
CNN1-202ENST00000535659 H3BQ15 152 aa11.65□□□□□ -0.54
CNN1-202ENST00000535659 SNRPCP09234 159 aaKnown RBP11.65□□□□□ -0.54
CNN1-202ENST00000535659 GUK1Q16774 197 aa11.65□□□□□ -0.54
CNN1-202ENST00000535659 KPRPQ5T749 579 aaPredicted RBP11.65□□□□□ -0.54
CNN1-202ENST00000535659 ALKAL2Q6UX46 152 aa11.65□□□□□ -0.54
CNN1-202ENST00000535659 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.65□□□□□ -0.54
CNN1-202ENST00000535659 PQLC2Q6ZP29 291 aa11.65□□□□□ -0.54
CNN1-202ENST00000535659 SSX7Q7RTT5 188 aa11.65□□□□□ -0.54
CNN1-202ENST00000535659 FAM213BQ8TBF2 198 aa11.65□□□□□ -0.54
CNN1-202ENST00000535659 RNF141Q8WVD5 230 aa11.65□□□□□ -0.54
CNN1-202ENST00000535659 NBEAP1P0C6P0 100 aa11.65□□□□□ -0.55
CNN1-202ENST00000535659 FXYD5Q96DB9 178 aa11.65□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 122.7 ms