RNA–Protein interactions for RNA: ENST00000535479.5

LPCAT3-203, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 1 (best)

Gene LPCAT3, Length 2,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-203ENST00000535479 TMEM213A2RRL7 107 aa11.06□□□□□ -0.64
LPCAT3-203ENST00000535479 CNIH1O95406 144 aa11.06□□□□□ -0.64
LPCAT3-203ENST00000535479 TCRAP04437 139 aa11.06□□□□□ -0.64
LPCAT3-203ENST00000535479 HLA-DMBP28068 263 aa11.06□□□□□ -0.64
LPCAT3-203ENST00000535479 LOXP28300 417 aaPredicted RBP11.06□□□□□ -0.64
LPCAT3-203ENST00000535479 KLRD1Q13241 179 aa11.06□□□□□ -0.64
LPCAT3-203ENST00000535479 C1orf185Q5T7R7 199 aa11.06□□□□□ -0.64
LPCAT3-203ENST00000535479 OSR1Q8TAX0 266 aaPredicted RBP11.06□□□□□ -0.64
LPCAT3-203ENST00000535479 GPR82Q96P67 336 aa11.06□□□□□ -0.64
LPCAT3-203ENST00000535479 TRAV9-1A0A075B6T8 112 aa11.06□□□□□ -0.64
LPCAT3-203ENST00000535479 SFTPCP11686 197 aa11.06□□□□□ -0.64
LPCAT3-203ENST00000535479 AMMECR1LQ6DCA0 310 aa11.06□□□□□ -0.64
LPCAT3-203ENST00000535479 TTTY13Q9BZ97 58 aa11.06□□□□□ -0.64
LPCAT3-203ENST00000535479 COX11Q9Y6N1 276 aa11.06□□□□□ -0.64
LPCAT3-203ENST00000535479 SPRY2O43597 315 aa11.05□□□□□ -0.64
LPCAT3-203ENST00000535479 THBDP07204 575 aa11.05□□□□□ -0.64
LPCAT3-203ENST00000535479 RPL27AP46776 148 aaKnown RBP11.05□□□□□ -0.64
LPCAT3-203ENST00000535479 POU2AF1Q16633 256 aa11.05□□□□□ -0.64
LPCAT3-203ENST00000535479 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.05□□□□□ -0.64
LPCAT3-203ENST00000535479 TMEM133Q9H2Q1 129 aa11.05□□□□□ -0.64
LPCAT3-203ENST00000535479 UTP20O75691 2785 aaKnown RBP11.05□□□□□ -0.64
LPCAT3-203ENST00000535479 TMEM265A0A087WTH1 108 aa11.05□□□□□ -0.64
LPCAT3-203ENST00000535479 SYS1-DBNDD2H3BUS1 97 aa11.05□□□□□ -0.64
LPCAT3-203ENST00000535479 APOHP02749 345 aaPredicted RBP11.05□□□□□ -0.64
LPCAT3-203ENST00000535479 LDLRAD2Q5SZI1 272 aa11.05□□□□□ -0.64
LPCAT3-203ENST00000535479 LINC01560Q8TB33 94 aa11.05□□□□□ -0.64
LPCAT3-203ENST00000535479 RAB37Q96AX2 223 aa11.05□□□□□ -0.64
LPCAT3-203ENST00000535479 IGHV3-49A0A0A0MS15 119 aa11.05□□□□□ -0.64
LPCAT3-203ENST00000535479 ZNF785A8K8V0 405 aa11.05□□□□□ -0.64
LPCAT3-203ENST00000535479 GAS8-AS1O95177 125 aa11.05□□□□□ -0.64
LPCAT3-203ENST00000535479 KLHDC1Q8N7A1 406 aa11.05□□□□□ -0.64
LPCAT3-203ENST00000535479 PERPQ96FX8 193 aa11.05□□□□□ -0.64
LPCAT3-203ENST00000535479 C18orf15Q96N68 181 aa11.05□□□□□ -0.64
LPCAT3-203ENST00000535479 IGHV2-26A0A0B4J1V2 119 aa11.04□□□□□ -0.64
LPCAT3-203ENST00000535479 TMEM178BH3BS89 294 aa11.04□□□□□ -0.64
LPCAT3-203ENST00000535479 LINC00614P0C842 121 aa11.04□□□□□ -0.64
LPCAT3-203ENST00000535479 FCGR2BP31994 310 aaPredicted RBP11.04□□□□□ -0.64
LPCAT3-203ENST00000535479 TMEM167AQ8TBQ9 72 aa11.04□□□□□ -0.64
LPCAT3-203ENST00000535479 MRPL32Q9BYC8 188 aaKnown RBP11.04□□□□□ -0.64
LPCAT3-203ENST00000535479 INSIG2Q9Y5U4 225 aa11.04□□□□□ -0.64
LPCAT3-203ENST00000535479 F11RQ9Y624 299 aaKnown RBP11.04□□□□□ -0.64
LPCAT3-203ENST00000535479 GP9P14770 177 aa11.04□□□□□ -0.64
LPCAT3-203ENST00000535479 HES1Q14469 280 aa11.04□□□□□ -0.64
LPCAT3-203ENST00000535479 LRRC10Q5BKY1 277 aa11.04□□□□□ -0.64
LPCAT3-203ENST00000535479 TMEM108Q6UXF1 575 aa11.04□□□□□ -0.64
LPCAT3-203ENST00000535479 ONECUT1Q9UBC0 465 aa11.04□□□□□ -0.64
LPCAT3-203ENST00000535479 K7EP13 123 aa11.03□□□□□ -0.64
LPCAT3-203ENST00000535479 IFI27P40305 119 aaPredicted RBP11.03□□□□□ -0.64
LPCAT3-203ENST00000535479 GAGE1Q13065 139 aa11.03□□□□□ -0.64
LPCAT3-203ENST00000535479 VMA21Q3ZAQ7 101 aa11.03□□□□□ -0.64
LPCAT3-203ENST00000535479 ZNF738Q8NE65 137 aa11.03□□□□□ -0.64
LPCAT3-203ENST00000535479 IGKV2-40A0A087WW87 121 aaPredicted RBP11.03□□□□□ -0.64
LPCAT3-203ENST00000535479 A0A1B0GXF2 115 aa11.03□□□□□ -0.64
LPCAT3-203ENST00000535479 IGKV2D-40P01614 121 aaPredicted RBP11.03□□□□□ -0.64
LPCAT3-203ENST00000535479 IGHV1-8P0DP01 117 aa11.03□□□□□ -0.64
LPCAT3-203ENST00000535479 IL4P05112 153 aa11.02□□□□□ -0.64
LPCAT3-203ENST00000535479 GATA4P43694 442 aa11.02□□□□□ -0.64
LPCAT3-203ENST00000535479 SUB1P53999 127 aaKnown RBP eCLIP11.02□□□□□ -0.64
LPCAT3-203ENST00000535479 ARF6P62330 175 aa11.02□□□□□ -0.64
LPCAT3-203ENST00000535479 SLC25A39Q9BZJ4 359 aaPredicted RBP11.02□□□□□ -0.64
LPCAT3-203ENST00000535479 AMN1Q8IY45 258 aa11.02□□□□□ -0.65
LPCAT3-203ENST00000535479 CACNG8Q8WXS5 425 aa11.02□□□□□ -0.65
LPCAT3-203ENST00000535479 CHRDL1Q9BU40 450 aa11.02□□□□□ -0.65
LPCAT3-203ENST00000535479 HIGD1AQ9Y241 93 aa11.02□□□□□ -0.65
LPCAT3-203ENST00000535479 A8MWL6 223 aa11.02□□□□□ -0.65
LPCAT3-203ENST00000535479 FNDC10F2Z333 226 aa11.02□□□□□ -0.65
LPCAT3-203ENST00000535479 C16orf97H3BN30 126 aa11.02□□□□□ -0.65
LPCAT3-203ENST00000535479 MYCNOSP40205 109 aa11.02□□□□□ -0.65
LPCAT3-203ENST00000535479 CRIP1P50238 77 aa11.02□□□□□ -0.65
LPCAT3-203ENST00000535479 RBX1P62877 108 aa11.02□□□□□ -0.65
LPCAT3-203ENST00000535479 UBE2V1Q13404 147 aa11.02□□□□□ -0.65
LPCAT3-203ENST00000535479 Q86TA4 180 aa11.02□□□□□ -0.65
LPCAT3-203ENST00000535479 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.02□□□□□ -0.651e-6■■■■■ 29.4
LPCAT3-203ENST00000535479 PRSS3P2Q8NHM4 247 aa11.01□□□□□ -0.65
LPCAT3-203ENST00000535479 ABHD17AQ96GS6 310 aa11.01□□□□□ -0.65
LPCAT3-203ENST00000535479 MSRB1Q9NZV6 116 aa11.01□□□□□ -0.65
LPCAT3-203ENST00000535479 TRAV8-6A0A0B4J262 113 aa11.01□□□□□ -0.65
LPCAT3-203ENST00000535479 J3KRW8 73 aa11.01□□□□□ -0.65
LPCAT3-203ENST00000535479 RASL11BQ9BPW5 248 aa11.01□□□□□ -0.65
LPCAT3-203ENST00000535479 MLST8Q9BVC4 326 aa11.01□□□□□ -0.65
LPCAT3-203ENST00000535479 MRPL27Q9P0M9 148 aaKnown RBP11.01□□□□□ -0.65
LPCAT3-203ENST00000535479 E7EQL1 145 aa11□□□□□ -0.65
LPCAT3-203ENST00000535479 VSTM2AQ8TAG5 236 aa11□□□□□ -0.65
LPCAT3-203ENST00000535479 CHODLQ9H9P2 273 aa11□□□□□ -0.65
LPCAT3-203ENST00000535479 SIGLEC9Q9Y336 463 aa11□□□□□ -0.65
LPCAT3-203ENST00000535479 CBY1Q9Y3M2 126 aa11□□□□□ -0.65
LPCAT3-203ENST00000535479 D6R8Y8 96 aa11□□□□□ -0.65
LPCAT3-203ENST00000535479 TAX1BP3O14907 124 aa11□□□□□ -0.65
LPCAT3-203ENST00000535479 IGLV2-11P01706 119 aa11□□□□□ -0.65
LPCAT3-203ENST00000535479 TEX36Q5VZQ5 186 aa11□□□□□ -0.65
LPCAT3-203ENST00000535479 IGFL2Q6UWQ7 119 aa11□□□□□ -0.65
LPCAT3-203ENST00000535479 Q6ZQT7 251 aa11□□□□□ -0.65
LPCAT3-203ENST00000535479 RBPMS2Q6ZRY4 209 aaKnown RBP11□□□□□ -0.65
LPCAT3-203ENST00000535479 C5orf17Q8NAS9 161 aa11□□□□□ -0.65
LPCAT3-203ENST00000535479 TMEM186Q96B77 213 aa11□□□□□ -0.65
LPCAT3-203ENST00000535479 FAM90A27PA6NNH2 459 aa10.99□□□□□ -0.65
LPCAT3-203ENST00000535479 LTAP01374 205 aa10.99□□□□□ -0.65
LPCAT3-203ENST00000535479 ANKRD39Q53RE8 183 aa10.99□□□□□ -0.65
LPCAT3-203ENST00000535479 PPP1R27Q86WC6 154 aa10.99□□□□□ -0.65
LPCAT3-203ENST00000535479 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 109 ms