RNA–Protein interactions for RNA: ENST00000535038.1

TNFRSF1A-206, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 578 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-206ENST00000535038 C11orf71Q6IPW1 123 aa4.64□□□□□ -1.67
TNFRSF1A-206ENST00000535038 KRTAP5-11Q6L8G4 156 aa4.64□□□□□ -1.67
TNFRSF1A-206ENST00000535038 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.64□□□□□ -1.67
TNFRSF1A-206ENST00000535038 HCP5Q6MZN7 132 aa4.64□□□□□ -1.67
TNFRSF1A-206ENST00000535038 ZNF600Q6ZNG1 722 aa4.64□□□□□ -1.67
TNFRSF1A-206ENST00000535038 NIT1Q86X76 327 aa4.64□□□□□ -1.67
TNFRSF1A-206ENST00000535038 PERPQ96FX8 193 aa4.64□□□□□ -1.67
TNFRSF1A-206ENST00000535038 LINC00479Q96M42 142 aa4.64□□□□□ -1.67
TNFRSF1A-206ENST00000535038 CLEC7AQ9BXN2 247 aa4.64□□□□□ -1.67
TNFRSF1A-206ENST00000535038 DYNLRB1Q9NP97 96 aa4.64□□□□□ -1.67
TNFRSF1A-206ENST00000535038 TNFRSF19Q9NS68 423 aa4.64□□□□□ -1.67
TNFRSF1A-206ENST00000535038 MRPL27Q9P0M9 148 aaKnown RBP4.64□□□□□ -1.67
TNFRSF1A-206ENST00000535038 KLK9Q9UKQ9 250 aa4.64□□□□□ -1.67
TNFRSF1A-206ENST00000535038 EPDR1Q9UM22 224 aa4.64□□□□□ -1.67
TNFRSF1A-206ENST00000535038 ANKHD1Q8IWZ3 2542 aaKnown RBP4.64□□□□□ -1.67
TNFRSF1A-206ENST00000535038 SMG1Q96Q15 3661 aaKnown RBP4.63□□□□□ -1.67
TNFRSF1A-206ENST00000535038 A0A1B0GV90 55 aa4.63□□□□□ -1.67
TNFRSF1A-206ENST00000535038 A0A1W2PS18 150 aa4.63□□□□□ -1.67
TNFRSF1A-206ENST00000535038 ZNF705GA8MUZ8 300 aaPredicted RBP4.63□□□□□ -1.67
TNFRSF1A-206ENST00000535038 ODF3BA8MYP8 253 aa4.63□□□□□ -1.67
TNFRSF1A-206ENST00000535038 MRPS12O15235 138 aaKnown RBP4.63□□□□□ -1.67
TNFRSF1A-206ENST00000535038 NDUFA3O95167 84 aa4.63□□□□□ -1.67
TNFRSF1A-206ENST00000535038 MOSP00540 346 aa4.63□□□□□ -1.67
TNFRSF1A-206ENST00000535038 LTAP01374 205 aa4.63□□□□□ -1.67
TNFRSF1A-206ENST00000535038 IGKV1-17P01599 117 aa4.63□□□□□ -1.67
TNFRSF1A-206ENST00000535038 IGLV2-11P01706 119 aa4.63□□□□□ -1.67
TNFRSF1A-206ENST00000535038 SNRPCP09234 159 aaKnown RBP4.63□□□□□ -1.67
TNFRSF1A-206ENST00000535038 CDKN1AP38936 164 aa4.63□□□□□ -1.67
TNFRSF1A-206ENST00000535038 CTRLP40313 264 aa4.63□□□□□ -1.67
TNFRSF1A-206ENST00000535038 CA7P43166 264 aa4.63□□□□□ -1.67
TNFRSF1A-206ENST00000535038 PRRX1P54821 245 aa4.63□□□□□ -1.67
TNFRSF1A-206ENST00000535038 SSTP61278 116 aa4.63□□□□□ -1.67
TNFRSF1A-206ENST00000535038 FXYD3Q14802 87 aa4.63□□□□□ -1.67
TNFRSF1A-206ENST00000535038 ZNF672Q499Z4 452 aaPredicted RBP4.63□□□□□ -1.67
TNFRSF1A-206ENST00000535038 C19orf35Q6ZS72 473 aa4.63□□□□□ -1.67
TNFRSF1A-206ENST00000535038 LINC00305Q7Z4B0 112 aa4.63□□□□□ -1.67
TNFRSF1A-206ENST00000535038 ATP5L2Q7Z4Y8 100 aa4.63□□□□□ -1.67
TNFRSF1A-206ENST00000535038 PPP1R27Q86WC6 154 aa4.63□□□□□ -1.67
TNFRSF1A-206ENST00000535038 BAGE2Q86Y30 109 aa4.63□□□□□ -1.67
TNFRSF1A-206ENST00000535038 GATD1Q8NB37 220 aa4.63□□□□□ -1.67
TNFRSF1A-206ENST00000535038 NUP35Q8NFH5 326 aa4.63□□□□□ -1.67
TNFRSF1A-206ENST00000535038 NPBQ8NG41 125 aa4.63□□□□□ -1.67
TNFRSF1A-206ENST00000535038 OR11H6Q8NGC7 330 aa4.63□□□□□ -1.67
TNFRSF1A-206ENST00000535038 TSKUQ8WUA8 353 aa4.63□□□□□ -1.67
TNFRSF1A-206ENST00000535038 KCNS1Q96KK3 526 aa4.63□□□□□ -1.67
TNFRSF1A-206ENST00000535038 RCHY1Q96PM5 261 aa4.63□□□□□ -1.67
TNFRSF1A-206ENST00000535038 HSPB9Q9BQS6 159 aa4.63□□□□□ -1.67
TNFRSF1A-206ENST00000535038 CHRDL1Q9BU40 450 aa4.63□□□□□ -1.67
TNFRSF1A-206ENST00000535038 LAMA5O15230 3695 aa4.63□□□□□ -1.67
TNFRSF1A-206ENST00000535038 ABCA1O95477 2261 aa4.62□□□□□ -1.67
TNFRSF1A-206ENST00000535038 CFAP47Q6ZTR5 3102 aa4.62□□□□□ -1.67
TNFRSF1A-206ENST00000535038 IGHV3-72A0A0B4J1Y9 119 aa4.62□□□□□ -1.67
TNFRSF1A-206ENST00000535038 TRAV34A0A0B4J273 112 aa4.62□□□□□ -1.67
TNFRSF1A-206ENST00000535038 WI2-2373I1.2A0A1W2PRP0 233 aa4.62□□□□□ -1.67
TNFRSF1A-206ENST00000535038 FAM231BA6NCW3 169 aa4.62□□□□□ -1.67
TNFRSF1A-206ENST00000535038 K7EIM0 57 aa4.62□□□□□ -1.67
TNFRSF1A-206ENST00000535038 HYPMO75409 117 aa4.62□□□□□ -1.67
TNFRSF1A-206ENST00000535038 CA1P00915 261 aaPredicted RBP4.62□□□□□ -1.67
TNFRSF1A-206ENST00000535038 IGHV3-48P01763 117 aa4.62□□□□□ -1.67
TNFRSF1A-206ENST00000535038 APOHP02749 345 aaPredicted RBP4.62□□□□□ -1.67
TNFRSF1A-206ENST00000535038 TCRAP04437 139 aa4.62□□□□□ -1.67
TNFRSF1A-206ENST00000535038 NBEAP1P0C6P0 100 aa4.62□□□□□ -1.67
TNFRSF1A-206ENST00000535038 BRS3P32247 399 aa4.62□□□□□ -1.67
TNFRSF1A-206ENST00000535038 FOXA3P55318 350 aaPredicted RBP4.62□□□□□ -1.67
TNFRSF1A-206ENST00000535038 TCL1AP56279 114 aa4.62□□□□□ -1.67
TNFRSF1A-206ENST00000535038 SUMO2P61956 95 aaKnown RBP4.62□□□□□ -1.67
TNFRSF1A-206ENST00000535038 GNG5P63218 68 aa4.62□□□□□ -1.67
TNFRSF1A-206ENST00000535038 RPL19P84098 196 aaKnown RBP4.62□□□□□ -1.67
TNFRSF1A-206ENST00000535038 ADORA2A-AS1P86434 159 aa4.62□□□□□ -1.67
TNFRSF1A-206ENST00000535038 SLAQ13239 276 aa4.62□□□□□ -1.67
TNFRSF1A-206ENST00000535038 MMDQ15546 238 aa4.62□□□□□ -1.67
TNFRSF1A-206ENST00000535038 TDRG1Q3Y452 100 aa4.62□□□□□ -1.67
TNFRSF1A-206ENST00000535038 LINC00322Q6ZN03 302 aaPredicted RBP4.62□□□□□ -1.67
TNFRSF1A-206ENST00000535038 Q8N6K4 173 aa4.62□□□□□ -1.67
TNFRSF1A-206ENST00000535038 C5orf17Q8NAS9 161 aa4.62□□□□□ -1.67
TNFRSF1A-206ENST00000535038 C18orf32Q8TCD1 76 aa4.62□□□□□ -1.67
TNFRSF1A-206ENST00000535038 SRSF12Q8WXF0 261 aaKnown RBP4.62□□□□□ -1.67
TNFRSF1A-206ENST00000535038 FMC1Q96HJ9 113 aa4.62□□□□□ -1.67
TNFRSF1A-206ENST00000535038 URB1-AS1Q96HZ7 61 aa4.62□□□□□ -1.67
TNFRSF1A-206ENST00000535038 ZNF414Q96IQ9 312 aa4.62□□□□□ -1.67
TNFRSF1A-206ENST00000535038 GPR82Q96P67 336 aa4.62□□□□□ -1.67
TNFRSF1A-206ENST00000535038 RBM14Q96PK6 669 aaKnown RBP4.62□□□□□ -1.67
TNFRSF1A-206ENST00000535038 TBX15Q96SF7 602 aa4.62□□□□□ -1.67
TNFRSF1A-206ENST00000535038 ATG101Q9BSB4 218 aa4.62□□□□□ -1.67
TNFRSF1A-206ENST00000535038 ALKBH7Q9BT30 221 aaPredicted RBP4.62□□□□□ -1.67
TNFRSF1A-206ENST00000535038 SNHG12Q9BXW3 62 aa4.62□□□□□ -1.67
TNFRSF1A-206ENST00000535038 FBXL15Q9H469 300 aa4.62□□□□□ -1.67
TNFRSF1A-206ENST00000535038 OTORQ9NRC9 128 aa4.62□□□□□ -1.67
TNFRSF1A-206ENST00000535038 ZNF586Q9NXT0 402 aa4.62□□□□□ -1.67
TNFRSF1A-206ENST00000535038 C1RLQ9NZP8 487 aa4.62□□□□□ -1.67
TNFRSF1A-206ENST00000535038 NAT8BQ9UHF3 227 aa4.62□□□□□ -1.67
TNFRSF1A-206ENST00000535038 SOX21Q9Y651 276 aaPredicted RBP4.62□□□□□ -1.67
TNFRSF1A-206ENST00000535038 PPIAL4CA0A0B4J2A2 164 aa4.61□□□□□ -1.67
TNFRSF1A-206ENST00000535038 PGPA6NDG6 321 aa4.61□□□□□ -1.67
TNFRSF1A-206ENST00000535038 LYNX1G3V0Z9 82 aa4.61□□□□□ -1.67
TNFRSF1A-206ENST00000535038 H3BRN7 92 aa4.61□□□□□ -1.67
TNFRSF1A-206ENST00000535038 M0R1W7 72 aa4.61□□□□□ -1.67
TNFRSF1A-206ENST00000535038 ZNF324O75467 553 aaPredicted RBP4.61□□□□□ -1.67
TNFRSF1A-206ENST00000535038 SCGB1D1O95968 90 aa4.61□□□□□ -1.67
TNFRSF1A-206ENST00000535038 APCSP02743 223 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms