RNA–Protein interactions for RNA: ENST00000534771.1

COPB1-212, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-212ENST00000534771 OR2J2O76002 312 aa-1.04□□□□□ -2.58
COPB1-212ENST00000534771 RPS3P23396 243 aaKnown RBP eCLIP-1.04□□□□□ -2.587e-8■■■■■ 46.8
COPB1-212ENST00000534771 CLDN12P56749 244 aa-1.04□□□□□ -2.58
COPB1-212ENST00000534771 VBP1P61758 197 aa-1.04□□□□□ -2.58
COPB1-212ENST00000534771 CDK6Q00534 326 aa-1.04□□□□□ -2.58
COPB1-212ENST00000534771 SLAMF1Q13291 335 aa-1.04□□□□□ -2.58
COPB1-212ENST00000534771 WFDC2Q14508 124 aa-1.04□□□□□ -2.58
COPB1-212ENST00000534771 RSU1Q15404 277 aa-1.04□□□□□ -2.58
COPB1-212ENST00000534771 KRTAP20-1Q3LI63 56 aa-1.04□□□□□ -2.58
COPB1-212ENST00000534771 KRTAP6-2Q3LI66 62 aa-1.04□□□□□ -2.58
COPB1-212ENST00000534771 TNFAIP8L2Q6P589 184 aaPredicted RBP-1.04□□□□□ -2.58
COPB1-212ENST00000534771 DNM1P34Q6PK57 102 aa-1.04□□□□□ -2.58
COPB1-212ENST00000534771 FBXL12Q9NXK8 326 aa-1.04□□□□□ -2.58
COPB1-212ENST00000534771 AKAP6Q13023 2319 aa-1.04□□□□□ -2.58
COPB1-212ENST00000534771 HECW1Q76N89 1606 aa-1.04□□□□□ -2.58
COPB1-212ENST00000534771 CHD7Q9P2D1 2997 aa-1.05□□□□□ -2.58
COPB1-212ENST00000534771 MAP2P11137 1827 aaKnown RBP-1.05□□□□□ -2.58
COPB1-212ENST00000534771 A0A096LNT2 108 aa-1.05□□□□□ -2.58
COPB1-212ENST00000534771 EXOC1LA0A1B0GW35 172 aa-1.05□□□□□ -2.58
COPB1-212ENST00000534771 A0A1W2PRS3 328 aa-1.05□□□□□ -2.58
COPB1-212ENST00000534771 OR7C1O76099 320 aaPredicted RBP-1.05□□□□□ -2.58
COPB1-212ENST00000534771 ORM1P02763 201 aa-1.05□□□□□ -2.58
COPB1-212ENST00000534771 CCL2P13500 99 aa-1.05□□□□□ -2.58
COPB1-212ENST00000534771 UCHL3P15374 230 aa-1.05□□□□□ -2.58
COPB1-212ENST00000534771 UGT2B7P16662 529 aa-1.05□□□□□ -2.58
COPB1-212ENST00000534771 MARCKSL1P49006 195 aa-1.05□□□□□ -2.58
COPB1-212ENST00000534771 RHOBP62745 196 aa-1.05□□□□□ -2.58
COPB1-212ENST00000534771 PPP1R1AQ13522 171 aa-1.05□□□□□ -2.58
COPB1-212ENST00000534771 CD200R1LQ6Q8B3 271 aa-1.05□□□□□ -2.58
COPB1-212ENST00000534771 SYCE1Q8N0S2 351 aa-1.05□□□□□ -2.58
COPB1-212ENST00000534771 C5orf17Q8NAS9 161 aa-1.05□□□□□ -2.58
COPB1-212ENST00000534771 OR51A2Q8NGJ7 313 aa-1.05□□□□□ -2.58
COPB1-212ENST00000534771 DDI1Q8WTU0 396 aa-1.05□□□□□ -2.58
COPB1-212ENST00000534771 KLK6Q92876 244 aa-1.05□□□□□ -2.58
COPB1-212ENST00000534771 RAB37Q96AX2 223 aa-1.05□□□□□ -2.58
COPB1-212ENST00000534771 LINC00208Q96KT6 92 aa-1.05□□□□□ -2.58
COPB1-212ENST00000534771 PRADC1Q9BSG0 188 aa-1.05□□□□□ -2.58
COPB1-212ENST00000534771 POFUT2Q9Y2G5 429 aa-1.05□□□□□ -2.58
COPB1-212ENST00000534771 PPRC1Q5VV67 1664 aaKnown RBP-1.05□□□□□ -2.58
COPB1-212ENST00000534771 CTTNBP2Q8WZ74 1663 aa-1.05□□□□□ -2.58
COPB1-212ENST00000534771 MYH10P35580 1976 aa-1.05□□□□□ -2.58
COPB1-212ENST00000534771 NEO1Q92859 1461 aa-1.05□□□□□ -2.58
COPB1-212ENST00000534771 TNS1Q9HBL0 1735 aaKnown RBP-1.06□□□□□ -2.58
COPB1-212ENST00000534771 A0A0J9YY99 117 aa-1.06□□□□□ -2.58
COPB1-212ENST00000534771 TINCRA0A1B0GVN0 87 aa-1.06□□□□□ -2.58
COPB1-212ENST00000534771 A8MWV9 139 aa-1.06□□□□□ -2.58
COPB1-212ENST00000534771 B4DSR2 109 aa-1.06□□□□□ -2.58
COPB1-212ENST00000534771 C17orf112F2Z3M2 114 aa-1.06□□□□□ -2.58
COPB1-212ENST00000534771 M0R233 179 aa-1.06□□□□□ -2.58
COPB1-212ENST00000534771 CSTAP01040 98 aa-1.06□□□□□ -2.58
COPB1-212ENST00000534771 KDELR2P33947 212 aa-1.06□□□□□ -2.58
COPB1-212ENST00000534771 FBXO48Q5FWF7 155 aa-1.06□□□□□ -2.58
COPB1-212ENST00000534771 CD302Q8IX05 232 aa-1.06□□□□□ -2.58
COPB1-212ENST00000534771 OR10K1Q8NGX5 313 aa-1.06□□□□□ -2.58
COPB1-212ENST00000534771 ADAT3Q96EY9 351 aaPredicted RBP-1.06□□□□□ -2.58
COPB1-212ENST00000534771 Q96NJ1 140 aa-1.06□□□□□ -2.58
COPB1-212ENST00000534771 NCOR1P1Q9H4R4 102 aa-1.06□□□□□ -2.58
COPB1-212ENST00000534771 PRTFDC1Q9NRG1 225 aa-1.06□□□□□ -2.58
COPB1-212ENST00000534771 SPANXB1Q9NS25 103 aaPredicted RBP-1.06□□□□□ -2.58
COPB1-212ENST00000534771 OBSL1O75147 1896 aa-1.06□□□□□ -2.58
COPB1-212ENST00000534771 PKD1L2Q7Z442 2459 aa-1.06□□□□□ -2.58
COPB1-212ENST00000534771 LYSTQ99698 3801 aa-1.06□□□□□ -2.58
COPB1-212ENST00000534771 DOCK4Q8N1I0 1966 aa-1.07□□□□□ -2.58
COPB1-212ENST00000534771 EYSQ5T1H1 3165 aa-1.07□□□□□ -2.58
COPB1-212ENST00000534771 HECW2Q9P2P5 1572 aa-1.07□□□□□ -2.58
COPB1-212ENST00000534771 TRAV27A0A087WT01 109 aa-1.07□□□□□ -2.58
COPB1-212ENST00000534771 A0A096LPI6 279 aa-1.07□□□□□ -2.58
COPB1-212ENST00000534771 C1orf196B1AJZ1 125 aa-1.07□□□□□ -2.58
COPB1-212ENST00000534771 MCRIP1C9JLW8 97 aa-1.07□□□□□ -2.58
COPB1-212ENST00000534771 H7BYZ3 331 aa-1.07□□□□□ -2.58
COPB1-212ENST00000534771 BIRC5O15392 142 aa-1.07□□□□□ -2.58
COPB1-212ENST00000534771 IGHV3-33P01772 117 aa-1.07□□□□□ -2.58
COPB1-212ENST00000534771 ISG15P05161 165 aa-1.07□□□□□ -2.58
COPB1-212ENST00000534771 NMBP08949 121 aa-1.07□□□□□ -2.58
COPB1-212ENST00000534771 MYL12AP19105 171 aa-1.07□□□□□ -2.58
COPB1-212ENST00000534771 SYT1P21579 422 aa-1.07□□□□□ -2.58
COPB1-212ENST00000534771 EDDM3AQ14507 147 aa-1.07□□□□□ -2.58
COPB1-212ENST00000534771 FXYD3Q14802 87 aa-1.07□□□□□ -2.58
COPB1-212ENST00000534771 C1orf134Q5TEV5 83 aa-1.07□□□□□ -2.58
COPB1-212ENST00000534771 CST9Q5W186 159 aa-1.07□□□□□ -2.58
COPB1-212ENST00000534771 ARPINQ7Z6K5 226 aa-1.07□□□□□ -2.58
COPB1-212ENST00000534771 COMMD7Q86VX2 200 aa-1.07□□□□□ -2.58
COPB1-212ENST00000534771 FUNDC1Q8IVP5 155 aa-1.07□□□□□ -2.58
COPB1-212ENST00000534771 SMIM19Q96E16 107 aa-1.07□□□□□ -2.58
COPB1-212ENST00000534771 C3orf18Q9UK00 162 aa-1.07□□□□□ -2.58
COPB1-212ENST00000534771 CYSLTR1Q9Y271 337 aa-1.07□□□□□ -2.58
COPB1-212ENST00000534771 C15orf41Q9Y2V0 281 aa-1.07□□□□□ -2.58
COPB1-212ENST00000534771 TMEM56-RWDD3S4R434 201 aa-1.07□□□□□ -2.58
COPB1-212ENST00000534771 DMXL2Q8TDJ6 3036 aa-1.07□□□□□ -2.58
COPB1-212ENST00000534771 ZZEF1O43149 2961 aa-1.07□□□□□ -2.58
COPB1-212ENST00000534771 KALRNO60229 2985 aa-1.08□□□□□ -2.58
COPB1-212ENST00000534771 C9orf170A2RU37 121 aa-1.08□□□□□ -2.58
COPB1-212ENST00000534771 MKRN2OSH3BPM6 223 aa-1.08□□□□□ -2.58
COPB1-212ENST00000534771 M0R3E3 92 aa-1.08□□□□□ -2.58
COPB1-212ENST00000534771 HPGDSO60760 199 aa-1.08□□□□□ -2.58
COPB1-212ENST00000534771 BRI3O95415 125 aa-1.08□□□□□ -2.58
COPB1-212ENST00000534771 IGHV3-30P01768 117 aa-1.08□□□□□ -2.58
COPB1-212ENST00000534771 HLA-DRB1P01911 266 aa-1.08□□□□□ -2.58
COPB1-212ENST00000534771 MPC1LP0DKB6 136 aa-1.08□□□□□ -2.58
COPB1-212ENST00000534771 IGHV3-30-5P0DP03 117 aa-1.08□□□□□ -2.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms