RNA–Protein interactions for RNA: ENST00000534405.5

SMPD1-210, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,446 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-210ENST00000534405 C8orf88P0DMB2 117 aa15.38■□□□□ 0.05
SMPD1-210ENST00000534405 PPP1R35Q8TAP8 253 aa15.38■□□□□ 0.05
SMPD1-210ENST00000534405 S1PR3Q99500 378 aa15.38■□□□□ 0.05
SMPD1-210ENST00000534405 CDIP1Q9H305 208 aa15.38■□□□□ 0.05
SMPD1-210ENST00000534405 RPP21Q9H633 154 aaKnown RBP15.38■□□□□ 0.05
SMPD1-210ENST00000534405 PLCE1Q9P212 2302 aa15.38■□□□□ 0.05
SMPD1-210ENST00000534405 CEACAM4O75871 244 aa15.37■□□□□ 0.05
SMPD1-210ENST00000534405 INSL3P51460 131 aa15.37■□□□□ 0.05
SMPD1-210ENST00000534405 SSBP2P81877 361 aaPredicted RBP15.37■□□□□ 0.05
SMPD1-210ENST00000534405 GAGE5Q13069 117 aa15.37■□□□□ 0.05
SMPD1-210ENST00000534405 GAGE6Q13070 117 aa15.37■□□□□ 0.05
SMPD1-210ENST00000534405 TRBV7-9A0A0J9YWB2 115 aa15.37■□□□□ 0.05
SMPD1-210ENST00000534405 C22orf34Q6ZV56 151 aa15.37■□□□□ 0.05
SMPD1-210ENST00000534405 TCF19Q9Y242 345 aa15.37■□□□□ 0.05
SMPD1-210ENST00000534405 hADV38S2A0JD32 116 aa15.36■□□□□ 0.05
SMPD1-210ENST00000534405 CHEK1O14757 476 aa15.36■□□□□ 0.05
SMPD1-210ENST00000534405 ERVK-16P61578 105 aa15.36■□□□□ 0.05
SMPD1-210ENST00000534405 KLRD1Q13241 179 aa15.36■□□□□ 0.05
SMPD1-210ENST00000534405 LCNL1Q6ZST4 164 aa15.36■□□□□ 0.05
SMPD1-210ENST00000534405 PCP2Q8IVA1 136 aa15.36■□□□□ 0.05
SMPD1-210ENST00000534405 BCL6BQ8N143 479 aaPredicted RBP15.36■□□□□ 0.05
SMPD1-210ENST00000534405 C20orf78Q9BR46 151 aa15.36■□□□□ 0.05
SMPD1-210ENST00000534405 SLC25A33Q9BSK2 321 aa15.36■□□□□ 0.05
SMPD1-210ENST00000534405 PRSS22Q9GZN4 317 aa15.36■□□□□ 0.05
SMPD1-210ENST00000534405 HIGD1BQ9P298 99 aa15.36■□□□□ 0.05
SMPD1-210ENST00000534405 PRO0461Q9UI25 63 aa15.36■□□□□ 0.05
SMPD1-210ENST00000534405 APOHP02749 345 aaPredicted RBP15.36■□□□□ 0.05
SMPD1-210ENST00000534405 GCSHP23434 173 aa15.36■□□□□ 0.05
SMPD1-210ENST00000534405 GLRXP35754 106 aa15.36■□□□□ 0.05
SMPD1-210ENST00000534405 ZNF137PP52743 207 aa15.36■□□□□ 0.05
SMPD1-210ENST00000534405 TM4SF20Q53R12 229 aa15.36■□□□□ 0.05
SMPD1-210ENST00000534405 PGLYRP4Q96LB8 373 aa15.36■□□□□ 0.05
SMPD1-210ENST00000534405 GFRA4Q9GZZ7 299 aa15.36■□□□□ 0.05
SMPD1-210ENST00000534405 CSN3P07498 182 aa15.35■□□□□ 0.05
SMPD1-210ENST00000534405 SAA2P0DJI9 122 aaPredicted RBP15.35■□□□□ 0.05
SMPD1-210ENST00000534405 HERV-K104P63124 156 aa15.35■□□□□ 0.05
SMPD1-210ENST00000534405 ZNF329Q86UD4 541 aa15.35■□□□□ 0.05
SMPD1-210ENST00000534405 K7ERJ3 54 aa15.35■□□□□ 0.05
SMPD1-210ENST00000534405 MYOD1P15172 320 aa15.35■□□□□ 0.05
SMPD1-210ENST00000534405 RBPMS2Q6ZRY4 209 aaKnown RBP15.35■□□□□ 0.05
SMPD1-210ENST00000534405 RP1L1Q8IWN7 2480 aaPredicted RBP15.35■□□□□ 0.05
SMPD1-210ENST00000534405 MGAQ8IWI9 3026 aa15.35■□□□□ 0.05
SMPD1-210ENST00000534405 IGLV3-9A0A075B6K5 115 aa15.34■□□□□ 0.05
SMPD1-210ENST00000534405 GAGE13Q4V321 117 aa15.34■□□□□ 0.05
SMPD1-210ENST00000534405 FAM167A-AS1Q96KT0 104 aa15.34■□□□□ 0.05
SMPD1-210ENST00000534405 SMG1Q96Q15 3661 aaKnown RBP15.34■□□□□ 0.05
SMPD1-210ENST00000534405 H3BMG7 143 aa15.34■□□□□ 0.05
SMPD1-210ENST00000534405 UBE2L3P68036 154 aaKnown RBP15.34■□□□□ 0.05
SMPD1-210ENST00000534405 F11RQ9Y624 299 aaKnown RBP15.34■□□□□ 0.05
SMPD1-210ENST00000534405 RAI1Q7Z5J4 1906 aaPredicted RBP15.33■□□□□ 0.05
SMPD1-210ENST00000534405 TANC2Q9HCD6 1990 aa15.33■□□□□ 0.04
SMPD1-210ENST00000534405 C15orf61A6NNL5 157 aa15.33■□□□□ 0.04
SMPD1-210ENST00000534405 IGLL5B9A064 214 aa15.33■□□□□ 0.04
SMPD1-210ENST00000534405 DEFB108BQ8NET1 73 aa15.33■□□□□ 0.04
SMPD1-210ENST00000534405 SLC25A2Q9BXI2 301 aa15.33■□□□□ 0.04
SMPD1-210ENST00000534405 MRPL32Q9BYC8 188 aaKnown RBP15.33■□□□□ 0.04
SMPD1-210ENST00000534405 MT-ATP8P03928 68 aa15.33■□□□□ 0.04
SMPD1-210ENST00000534405 CT45A10P0DMU9 189 aa15.33■□□□□ 0.04
SMPD1-210ENST00000534405 NMUP48645 174 aa15.33■□□□□ 0.04
SMPD1-210ENST00000534405 OR8A1Q8NGG7 326 aa15.33■□□□□ 0.04
SMPD1-210ENST00000534405 A0A096LNJ9 63 aa15.32■□□□□ 0.04
SMPD1-210ENST00000534405 TCRBV4S1A1TA0A5B7 111 aa15.32■□□□□ 0.04
SMPD1-210ENST00000534405 SRRM4A7MD48 611 aaKnown RBP15.32■□□□□ 0.04
SMPD1-210ENST00000534405 SYT8Q8NBV8 401 aa15.32■□□□□ 0.04
SMPD1-210ENST00000534405 K7EM74 188 aa15.32■□□□□ 0.04
SMPD1-210ENST00000534405 HAX1O00165 279 aa15.32■□□□□ 0.04
SMPD1-210ENST00000534405 KIR2DS2P43631 304 aa15.32■□□□□ 0.04
SMPD1-210ENST00000534405 TNCP24821 2201 aa15.31■□□□□ 0.04
SMPD1-210ENST00000534405 TCTAP57738 103 aa15.31■□□□□ 0.04
SMPD1-210ENST00000534405 FAM27E3Q08E93 113 aa15.31■□□□□ 0.04
SMPD1-210ENST00000534405 Q6ZUT4 128 aa15.31■□□□□ 0.04
SMPD1-210ENST00000534405 PIFOQ8TCI5 191 aa15.31■□□□□ 0.04
SMPD1-210ENST00000534405 TM2D2Q9BX73 214 aa15.31■□□□□ 0.04
SMPD1-210ENST00000534405 TMEM14BQ9NUH8 114 aa15.31■□□□□ 0.04
SMPD1-210ENST00000534405 ZNRD1Q9P1U0 126 aa15.31■□□□□ 0.04
SMPD1-210ENST00000534405 C19orf71A6NCJ1 209 aa15.31■□□□□ 0.04
SMPD1-210ENST00000534405 IGHV1-46P01743 117 aa15.31■□□□□ 0.04
SMPD1-210ENST00000534405 GATA4P43694 442 aa15.31■□□□□ 0.04
SMPD1-210ENST00000534405 CACNG7P62955 275 aa15.31■□□□□ 0.04
SMPD1-210ENST00000534405 FOXI1Q12951 378 aa15.31■□□□□ 0.04
SMPD1-210ENST00000534405 LINC00322Q6ZN03 302 aaPredicted RBP15.31■□□□□ 0.04
SMPD1-210ENST00000534405 FAM216BQ8N7L0 139 aa15.31■□□□□ 0.04
SMPD1-210ENST00000534405 ATP6V0E2Q8NHE4 81 aa15.31■□□□□ 0.04
SMPD1-210ENST00000534405 GAFA1Q96PS6 74 aa15.31■□□□□ 0.04
SMPD1-210ENST00000534405 CCL13Q99616 98 aa15.31■□□□□ 0.04
SMPD1-210ENST00000534405 MLST8Q9BVC4 326 aa15.31■□□□□ 0.04
SMPD1-210ENST00000534405 ZNF492Q9P255 531 aa15.31■□□□□ 0.04
SMPD1-210ENST00000534405 IGKV1OR2-108A0A075B7D4 117 aa15.3■□□□□ 0.04
SMPD1-210ENST00000534405 ANAPC13Q9BS18 74 aa15.3■□□□□ 0.04
SMPD1-210ENST00000534405 RNF7Q9UBF6 113 aa15.3■□□□□ 0.04
SMPD1-210ENST00000534405 FOXA2Q9Y261 457 aaPredicted RBP15.3■□□□□ 0.04
SMPD1-210ENST00000534405 CEP250Q9BV73 2442 aa15.3■□□□□ 0.04
SMPD1-210ENST00000534405 NPIPB6E9PJ23 425 aa15.29■□□□□ 0.04
SMPD1-210ENST00000534405 TNFAIP6P98066 277 aaPredicted RBP15.29■□□□□ 0.04
SMPD1-210ENST00000534405 NHP2Q9NX24 153 aaKnown RBP15.29■□□□□ 0.04
SMPD1-210ENST00000534405 APOMO95445 188 aa15.29■□□□□ 0.04
SMPD1-210ENST00000534405 P01737 135 aa15.29■□□□□ 0.04
SMPD1-210ENST00000534405 HSPE1P61604 102 aaKnown RBP15.29■□□□□ 0.04
SMPD1-210ENST00000534405 IGFL3Q6UXB1 125 aa15.29■□□□□ 0.04
SMPD1-210ENST00000534405 CHAC1Q9BUX1 264 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms