RNA–Protein interactions for RNA: ENST00000534300.5

AMBRA1-212, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene AMBRA1, Length 5,067 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-212ENST00000534300 MTCL1Q9Y4B5 1905 aaKnown RBP9.94□□□□□ -0.82
AMBRA1-212ENST00000534300 F8W1H4 67 aa9.94□□□□□ -0.82
AMBRA1-212ENST00000534300 CRPP02741 224 aa9.94□□□□□ -0.82
AMBRA1-212ENST00000534300 PPDPFLQ8WWR9 84 aa9.94□□□□□ -0.82
AMBRA1-212ENST00000534300 PCNX2A6NKB5 2137 aa9.94□□□□□ -0.82
AMBRA1-212ENST00000534300 IGLV3-32A0A0A0MS00 114 aa9.94□□□□□ -0.82
AMBRA1-212ENST00000534300 IGKV3D-20A0A0C4DH25 116 aa9.94□□□□□ -0.82
AMBRA1-212ENST00000534300 ETDBQ3ZM63 59 aa9.94□□□□□ -0.82
AMBRA1-212ENST00000534300 ZNF48Q96MX3 618 aaPredicted RBP9.94□□□□□ -0.82
AMBRA1-212ENST00000534300 SLAQ13239 276 aa9.93□□□□□ -0.82
AMBRA1-212ENST00000534300 MDS2Q8NDY4 140 aa9.93□□□□□ -0.82
AMBRA1-212ENST00000534300 MESP1Q9BRJ9 268 aa9.93□□□□□ -0.82
AMBRA1-212ENST00000534300 OVOL2Q9BRP0 275 aa9.93□□□□□ -0.82
AMBRA1-212ENST00000534300 ANKRD36A6QL64 1941 aa9.93□□□□□ -0.82
AMBRA1-212ENST00000534300 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.93□□□□□ -0.82
AMBRA1-212ENST00000534300 C18orf32Q8TCD1 76 aa9.93□□□□□ -0.82
AMBRA1-212ENST00000534300 TMEM42Q69YG0 159 aa9.93□□□□□ -0.82
AMBRA1-212ENST00000534300 NLRC5Q86WI3 1866 aa9.93□□□□□ -0.82
AMBRA1-212ENST00000534300 YPEL3P61236 119 aaPredicted RBP9.93□□□□□ -0.82
AMBRA1-212ENST00000534300 TP53BP1Q12888 1972 aaPredicted RBP9.93□□□□□ -0.82
AMBRA1-212ENST00000534300 PMS2P5A8MQ11 134 aa9.92□□□□□ -0.82
AMBRA1-212ENST00000534300 OVOL1O14753 267 aa9.92□□□□□ -0.82
AMBRA1-212ENST00000534300 DUSP14O95147 198 aaKnown RBP9.92□□□□□ -0.82
AMBRA1-212ENST00000534300 ZNF138P52744 262 aa9.92□□□□□ -0.82
AMBRA1-212ENST00000534300 QRFPP83859 136 aa9.92□□□□□ -0.82
AMBRA1-212ENST00000534300 LY6G6EA0A0G2JKS1 128 aa9.92□□□□□ -0.82
AMBRA1-212ENST00000534300 CCL3L1P16619 93 aa9.92□□□□□ -0.82
AMBRA1-212ENST00000534300 TMEM158Q8WZ71 300 aa9.92□□□□□ -0.82
AMBRA1-212ENST00000534300 GFRA4Q9GZZ7 299 aa9.92□□□□□ -0.82
AMBRA1-212ENST00000534300 U3KQA8 63 aa9.92□□□□□ -0.82
AMBRA1-212ENST00000534300 PLXNA4Q9HCM2 1894 aa9.92□□□□□ -0.82
AMBRA1-212ENST00000534300 A0A0U1RRA0 63 aa9.92□□□□□ -0.82
AMBRA1-212ENST00000534300 LILRA1O75019 489 aa9.92□□□□□ -0.82
AMBRA1-212ENST00000534300 Q6ZS49 121 aa9.92□□□□□ -0.82
AMBRA1-212ENST00000534300 TRGV9Q99603 122 aa9.92□□□□□ -0.82
AMBRA1-212ENST00000534300 LRRK1Q38SD2 2015 aa9.92□□□□□ -0.82
AMBRA1-212ENST00000534300 SPTAN1Q13813 2472 aaKnown RBP9.92□□□□□ -0.82
AMBRA1-212ENST00000534300 TRBV6-6A0A0A6YYG2 114 aa9.92□□□□□ -0.82
AMBRA1-212ENST00000534300 K7EP34 96 aa9.92□□□□□ -0.82
AMBRA1-212ENST00000534300 LINC01587Q99440 93 aa9.92□□□□□ -0.82
AMBRA1-212ENST00000534300 NTF4P34130 210 aa9.91□□□□□ -0.82
AMBRA1-212ENST00000534300 C1orf122Q6ZSJ8 110 aa9.91□□□□□ -0.82
AMBRA1-212ENST00000534300 LYPD1Q8N2G4 141 aa9.91□□□□□ -0.82
AMBRA1-212ENST00000534300 PHLDA1Q8WV24 401 aaPredicted RBP9.91□□□□□ -0.82
AMBRA1-212ENST00000534300 TMEM133Q9H2Q1 129 aa9.91□□□□□ -0.82
AMBRA1-212ENST00000534300 FNDC10F2Z333 226 aa9.91□□□□□ -0.82
AMBRA1-212ENST00000534300 CT83Q5H943 113 aa9.91□□□□□ -0.82
AMBRA1-212ENST00000534300 CENPVQ7Z7K6 275 aaPredicted RBP9.91□□□□□ -0.82
AMBRA1-212ENST00000534300 STPG4Q8N801 248 aa9.91□□□□□ -0.82
AMBRA1-212ENST00000534300 TNFRSF14Q92956 283 aa9.91□□□□□ -0.82
AMBRA1-212ENST00000534300 IGHV3-64A0A075B6Q5 118 aa9.91□□□□□ -0.82
AMBRA1-212ENST00000534300 VCYO14598 125 aa9.91□□□□□ -0.82
AMBRA1-212ENST00000534300 TOMM40O96008 361 aa9.91□□□□□ -0.82
AMBRA1-212ENST00000534300 PLAURQ03405 335 aa9.91□□□□□ -0.82
AMBRA1-212ENST00000534300 ABCA4P78363 2273 aa9.91□□□□□ -0.82
AMBRA1-212ENST00000534300 GAGE12HA6NDE8 117 aa9.91□□□□□ -0.82
AMBRA1-212ENST00000534300 MYOD1P15172 320 aa9.91□□□□□ -0.82
AMBRA1-212ENST00000534300 Q6ZWC4 215 aa9.91□□□□□ -0.82
AMBRA1-212ENST00000534300 LHFPL4Q7Z7J7 247 aa9.91□□□□□ -0.82
AMBRA1-212ENST00000534300 EXOC3-AS1Q8N2X6 119 aa9.91□□□□□ -0.82
AMBRA1-212ENST00000534300 ZIC4Q8N9L1 334 aa9.91□□□□□ -0.82
AMBRA1-212ENST00000534300 DNAJC30Q96LL9 226 aa9.91□□□□□ -0.82
AMBRA1-212ENST00000534300 METRNQ9UJH8 293 aa9.91□□□□□ -0.82
AMBRA1-212ENST00000534300 ANK1P16157 1881 aa9.91□□□□□ -0.82
AMBRA1-212ENST00000534300 GBF1Q92538 1859 aa9.91□□□□□ -0.82
AMBRA1-212ENST00000534300 C17orf100A8MU93 164 aa9.9□□□□□ -0.82
AMBRA1-212ENST00000534300 RPUSD1Q9UJJ7 312 aaKnown RBP9.9□□□□□ -0.82
AMBRA1-212ENST00000534300 CADP27708 2225 aa9.9□□□□□ -0.82
AMBRA1-212ENST00000534300 NOTCH3Q9UM47 2321 aa9.9□□□□□ -0.82
AMBRA1-212ENST00000534300 DOCK11Q5JSL3 2073 aa9.9□□□□□ -0.82
AMBRA1-212ENST00000534300 CDKN1BP46527 198 aa9.9□□□□□ -0.82
AMBRA1-212ENST00000534300 MCRIP2Q9BUT9 160 aaKnown RBP9.9□□□□□ -0.82
AMBRA1-212ENST00000534300 SPRR3Q9UBC9 169 aa9.9□□□□□ -0.82
AMBRA1-212ENST00000534300 LSM4Q9Y4Z0 139 aaKnown RBP9.9□□□□□ -0.82
AMBRA1-212ENST00000534300 ROS1P08922 2347 aa9.9□□□□□ -0.82
AMBRA1-212ENST00000534300 TRGV11A0A075B6L2 103 aa9.9□□□□□ -0.82
AMBRA1-212ENST00000534300 WISP1O95388 367 aa9.9□□□□□ -0.82
AMBRA1-212ENST00000534300 IGHV1-2P23083 117 aa9.9□□□□□ -0.82
AMBRA1-212ENST00000534300 CFPP27918 469 aa9.9□□□□□ -0.82
AMBRA1-212ENST00000534300 SCRT1Q9BWW7 348 aa9.9□□□□□ -0.82
AMBRA1-212ENST00000534300 KLF2Q9Y5W3 355 aaPredicted RBP9.9□□□□□ -0.82
AMBRA1-212ENST00000534300 TRAV8-3A0A0A6YYJ7 113 aa9.9□□□□□ -0.83
AMBRA1-212ENST00000534300 C15orf62A8K5M9 175 aa9.9□□□□□ -0.83
AMBRA1-212ENST00000534300 IGHG3P01860 377 aa9.9□□□□□ -0.83
AMBRA1-212ENST00000534300 LINC00158P58513 81 aa9.9□□□□□ -0.83
AMBRA1-212ENST00000534300 DPH3P1Q9H4G8 78 aa9.9□□□□□ -0.83
AMBRA1-212ENST00000534300 A0A1B0GUS0 222 aa9.89□□□□□ -0.83
AMBRA1-212ENST00000534300 FXYD7P58549 80 aa9.89□□□□□ -0.83
AMBRA1-212ENST00000534300 PLXNA3P51805 1871 aa9.89□□□□□ -0.83
AMBRA1-212ENST00000534300 TRGV2A0A075B6R0 118 aa9.89□□□□□ -0.83
AMBRA1-212ENST00000534300 IGLL1P15814 213 aa9.89□□□□□ -0.83
AMBRA1-212ENST00000534300 GATD1Q8NB37 220 aa9.89□□□□□ -0.83
AMBRA1-212ENST00000534300 IGKV1-27A0A075B6S5 117 aa9.89□□□□□ -0.83
AMBRA1-212ENST00000534300 IGHV2-26A0A0B4J1V2 119 aa9.89□□□□□ -0.83
AMBRA1-212ENST00000534300 INAFM2P0DMQ5 153 aa9.89□□□□□ -0.83
AMBRA1-212ENST00000534300 ATRXP46100 2492 aa9.89□□□□□ -0.83
AMBRA1-212ENST00000534300 CELA3BP08861 270 aa9.89□□□□□ -0.83
AMBRA1-212ENST00000534300 COX8AP10176 69 aa9.89□□□□□ -0.83
AMBRA1-212ENST00000534300 NEGR1Q7Z3B1 354 aa9.88□□□□□ -0.83
AMBRA1-212ENST00000534300 AMN1Q8IY45 258 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms