RNA–Protein interactions for RNA: ENST00000534106.2

CHMP4A-208, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 5

Gene CHMP4A, Length 370 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-208ENST00000534106 C1orf196B1AJZ1 125 aa2.05□□□□□ -2.08
CHMP4A-208ENST00000534106 J3QRE1 110 aa2.05□□□□□ -2.08
CHMP4A-208ENST00000534106 DNASE2O00115 360 aaPredicted RBP2.05□□□□□ -2.08
CHMP4A-208ENST00000534106 CTDSPLO15194 276 aa2.05□□□□□ -2.08
CHMP4A-208ENST00000534106 TNFSF12O43508 249 aa2.05□□□□□ -2.08
CHMP4A-208ENST00000534106 CRTAPO75718 401 aaPredicted RBP2.05□□□□□ -2.08
CHMP4A-208ENST00000534106 ATG12O94817 140 aa2.05□□□□□ -2.08
CHMP4A-208ENST00000534106 SNAPINO95295 136 aa2.05□□□□□ -2.08
CHMP4A-208ENST00000534106 APOHP02749 345 aaPredicted RBP2.05□□□□□ -2.08
CHMP4A-208ENST00000534106 PRM2P04554 102 aa2.05□□□□□ -2.08
CHMP4A-208ENST00000534106 ISG15P05161 165 aa2.05□□□□□ -2.08
CHMP4A-208ENST00000534106 RD3LP0DJH9 198 aa2.05□□□□□ -2.08
CHMP4A-208ENST00000534106 MGMTP16455 207 aa2.05□□□□□ -2.08
CHMP4A-208ENST00000534106 RAB3AP20336 220 aa2.05□□□□□ -2.08
CHMP4A-208ENST00000534106 HRH1P35367 487 aa2.05□□□□□ -2.08
CHMP4A-208ENST00000534106 CBX5P45973 191 aa2.05□□□□□ -2.08
CHMP4A-208ENST00000534106 CAMLGP49069 296 aa2.05□□□□□ -2.08
CHMP4A-208ENST00000534106 H2BFSP57053 126 aa2.05□□□□□ -2.08
CHMP4A-208ENST00000534106 TAS2R31P59538 309 aa2.05□□□□□ -2.08
CHMP4A-208ENST00000534106 FXYD4P59646 89 aa2.05□□□□□ -2.08
CHMP4A-208ENST00000534106 RAB5BP61020 215 aa2.05□□□□□ -2.08
CHMP4A-208ENST00000534106 RPS11P62280 158 aaKnown RBP eCLIP2.05□□□□□ -2.08
CHMP4A-208ENST00000534106 GAGE5Q13069 117 aa2.05□□□□□ -2.08
CHMP4A-208ENST00000534106 GAGE6Q13070 117 aa2.05□□□□□ -2.08
CHMP4A-208ENST00000534106 PPP1R1AQ13522 171 aa2.05□□□□□ -2.08
CHMP4A-208ENST00000534106 MEF2DQ14814 521 aa2.05□□□□□ -2.08
CHMP4A-208ENST00000534106 PEA15Q15121 130 aa2.05□□□□□ -2.08
CHMP4A-208ENST00000534106 ZNF674Q2M3X9 581 aa2.05□□□□□ -2.08
CHMP4A-208ENST00000534106 NHLRC3Q5JS37 347 aa2.05□□□□□ -2.08
CHMP4A-208ENST00000534106 PAPPA-AS1Q5QFB9 102 aa2.05□□□□□ -2.08
CHMP4A-208ENST00000534106 SLC25A24Q6NUK1 477 aa2.05□□□□□ -2.08
CHMP4A-208ENST00000534106 GLIPR1L1Q6UWM5 242 aa2.05□□□□□ -2.08
CHMP4A-208ENST00000534106 HSD17B13Q7Z5P4 300 aaPredicted RBP2.05□□□□□ -2.08
CHMP4A-208ENST00000534106 GAPTQ8N292 157 aa2.05□□□□□ -2.08
CHMP4A-208ENST00000534106 SVBPQ8N300 66 aa2.05□□□□□ -2.08
CHMP4A-208ENST00000534106 TMEM229BQ8NBD8 167 aa2.05□□□□□ -2.08
CHMP4A-208ENST00000534106 CCDC54Q8NEL0 328 aa2.05□□□□□ -2.08
CHMP4A-208ENST00000534106 OR5D14Q8NGL3 314 aa2.05□□□□□ -2.08
CHMP4A-208ENST00000534106 OR5H2Q8NGV7 314 aa2.05□□□□□ -2.08
CHMP4A-208ENST00000534106 RNASE11Q8TAA1 199 aaKnown RBP2.05□□□□□ -2.08
CHMP4A-208ENST00000534106 MARCH1Q8TCQ1 289 aa2.05□□□□□ -2.08
CHMP4A-208ENST00000534106 GALMQ96C23 342 aa2.05□□□□□ -2.08
CHMP4A-208ENST00000534106 S100A13Q99584 98 aa2.05□□□□□ -2.08
CHMP4A-208ENST00000534106 PRRT1Q99946 306 aa2.05□□□□□ -2.08
CHMP4A-208ENST00000534106 SULT4A1Q9BR01 284 aa2.05□□□□□ -2.08
CHMP4A-208ENST00000534106 HDHD3Q9BSH5 251 aaPredicted RBP2.05□□□□□ -2.08
CHMP4A-208ENST00000534106 RHPN1-AS1Q9BWJ2 59 aa2.05□□□□□ -2.08
CHMP4A-208ENST00000534106 SELENOIQ9C0D9 397 aa2.05□□□□□ -2.08
CHMP4A-208ENST00000534106 ZNF430Q9H8G1 570 aaPredicted RBP2.05□□□□□ -2.08
CHMP4A-208ENST00000534106 RPS10P5Q9NQ39 176 aa2.05□□□□□ -2.08
CHMP4A-208ENST00000534106 BIN3Q9NQY0 253 aa2.05□□□□□ -2.08
CHMP4A-208ENST00000534106 SLC35D1Q9NTN3 355 aa2.05□□□□□ -2.08
CHMP4A-208ENST00000534106 EHFQ9NZC4 300 aa2.05□□□□□ -2.08
CHMP4A-208ENST00000534106 PIPOXQ9P0Z9 390 aa2.05□□□□□ -2.08
CHMP4A-208ENST00000534106 MTFP1Q9UDX5 166 aa2.05□□□□□ -2.08
CHMP4A-208ENST00000534106 JPT1Q9UK76 154 aa2.05□□□□□ -2.08
CHMP4A-208ENST00000534106 UFC1Q9Y3C8 167 aa2.05□□□□□ -2.08
CHMP4A-208ENST00000534106 TMED3Q9Y3Q3 217 aa2.05□□□□□ -2.08
CHMP4A-208ENST00000534106 TRBV5-5A0A0J9YX44 114 aa2.04□□□□□ -2.08
CHMP4A-208ENST00000534106 OR2T8A6NH00 312 aa2.04□□□□□ -2.08
CHMP4A-208ENST00000534106 ZNF98A6NK75 572 aa2.04□□□□□ -2.08
CHMP4A-208ENST00000534106 HMSDA8MTL9 139 aa2.04□□□□□ -2.08
CHMP4A-208ENST00000534106 G3V3Q6 166 aa2.04□□□□□ -2.08
CHMP4A-208ENST00000534106 SLC17A2O00624 439 aa2.04□□□□□ -2.08
CHMP4A-208ENST00000534106 CHEK1O14757 476 aa2.04□□□□□ -2.08
CHMP4A-208ENST00000534106 BET1O15155 118 aa2.04□□□□□ -2.08
CHMP4A-208ENST00000534106 SSX5O60225 188 aa2.04□□□□□ -2.08
CHMP4A-208ENST00000534106 ADAP1O75689 374 aa2.04□□□□□ -2.08
CHMP4A-208ENST00000534106 SFTA3P0C7M3 94 aa2.04□□□□□ -2.08
CHMP4A-208ENST00000534106 DNAH10OSP0CZ25 163 aa2.04□□□□□ -2.08
CHMP4A-208ENST00000534106 PET100P0DJ07 73 aa2.04□□□□□ -2.08
CHMP4A-208ENST00000534106 MIFP14174 115 aa2.04□□□□□ -2.08
CHMP4A-208ENST00000534106 FUT3P21217 361 aa2.04□□□□□ -2.08
CHMP4A-208ENST00000534106 NPY1RP25929 384 aa2.04□□□□□ -2.08
CHMP4A-208ENST00000534106 ZNF93P35789 620 aaPredicted RBP2.04□□□□□ -2.08
CHMP4A-208ENST00000534106 NPBWR1P48145 328 aa2.04□□□□□ -2.08
CHMP4A-208ENST00000534106 HOXA1P49639 335 aaPredicted RBP2.04□□□□□ -2.08
CHMP4A-208ENST00000534106 PPT1P50897 306 aa2.04□□□□□ -2.08
CHMP4A-208ENST00000534106 FXYD7P58549 80 aa2.04□□□□□ -2.08
CHMP4A-208ENST00000534106 OR2B8PP59922 312 aa2.04□□□□□ -2.08
CHMP4A-208ENST00000534106 DEFB1P60022 68 aa2.04□□□□□ -2.08
CHMP4A-208ENST00000534106 HERV-K104P61576 105 aa2.04□□□□□ -2.08
CHMP4A-208ENST00000534106 DHODHQ02127 395 aa2.04□□□□□ -2.08
CHMP4A-208ENST00000534106 ARL16Q0P5N6 197 aa2.04□□□□□ -2.08
CHMP4A-208ENST00000534106 DHRS2Q13268 280 aa2.04□□□□□ -2.08
CHMP4A-208ENST00000534106 OR2F1Q13607 317 aa2.04□□□□□ -2.08
CHMP4A-208ENST00000534106 HMGN3Q15651 99 aa2.04□□□□□ -2.08
CHMP4A-208ENST00000534106 VWC2Q2TAL6 325 aa2.04□□□□□ -2.08
CHMP4A-208ENST00000534106 ACTL10Q5JWF8 245 aa2.04□□□□□ -2.08
CHMP4A-208ENST00000534106 LY6G6FQ5SQ64 297 aa2.04□□□□□ -2.08
CHMP4A-208ENST00000534106 FAM222AQ5U5X8 452 aa2.04□□□□□ -2.08
CHMP4A-208ENST00000534106 OR4A47Q6IF82 309 aa2.04□□□□□ -2.08
CHMP4A-208ENST00000534106 LPCAT3Q6P1A2 487 aa2.04□□□□□ -2.08
CHMP4A-208ENST00000534106 TMEM182Q6ZP80 229 aaPredicted RBP2.04□□□□□ -2.08
CHMP4A-208ENST00000534106 Q6ZRG5 221 aa2.04□□□□□ -2.08
CHMP4A-208ENST00000534106 ACOT7LQ6ZUV0 252 aa2.04□□□□□ -2.08
CHMP4A-208ENST00000534106 Q75L30 129 aa2.04□□□□□ -2.08
CHMP4A-208ENST00000534106 TRPT1Q86TN4 253 aaKnown RBP2.04□□□□□ -2.08
CHMP4A-208ENST00000534106 PDPNQ86YL7 162 aa2.04□□□□□ -2.08
CHMP4A-208ENST00000534106 LINC00518Q8N0U6 118 aa2.04□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms