RNA–Protein interactions for RNA: ENST00000533820.5

CAPN1-226, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-226ENST00000533820 MCRIP2Q9BUT9 160 aaKnown RBP15.5■□□□□ 0.07
CAPN1-226ENST00000533820 EPDR1Q9UM22 224 aa15.5■□□□□ 0.07
CAPN1-226ENST00000533820 NDUFB3O43676 98 aa15.49■□□□□ 0.07
CAPN1-226ENST00000533820 CTSZQ9UBR2 303 aa15.49■□□□□ 0.07
CAPN1-226ENST00000533820 FAM231BA6NCW3 169 aa15.49■□□□□ 0.07
CAPN1-226ENST00000533820 IGLV2-23P01705 113 aa15.49■□□□□ 0.07
CAPN1-226ENST00000533820 PIP4P1Q86T03 277 aa15.49■□□□□ 0.07
CAPN1-226ENST00000533820 OR8B2Q96RD0 313 aa15.49■□□□□ 0.07
CAPN1-226ENST00000533820 FAM181BA6NEQ2 426 aa15.49■□□□□ 0.07
CAPN1-226ENST00000533820 ARHGAP32A7KAX9 2087 aa15.48■□□□□ 0.07
CAPN1-226ENST00000533820 A0A087X0K7 114 aa15.48■□□□□ 0.07
CAPN1-226ENST00000533820 ZNF138P52744 262 aa15.48■□□□□ 0.07
CAPN1-226ENST00000533820 SPATA12Q7Z6I5 190 aa15.48■□□□□ 0.07
CAPN1-226ENST00000533820 OR4A5Q8NH83 315 aa15.48■□□□□ 0.07
CAPN1-226ENST00000533820 PEF1Q9UBV8 284 aaKnown RBP15.48■□□□□ 0.07
CAPN1-226ENST00000533820 HIST1H1EP10412 219 aaKnown RBP15.48■□□□□ 0.07
CAPN1-226ENST00000533820 UQCRFS1P47985 274 aa15.48■□□□□ 0.07
CAPN1-226ENST00000533820 LINC00173Q6ZV60 143 aa15.48■□□□□ 0.07
CAPN1-226ENST00000533820 VSTM2AQ8TAG5 236 aa15.48■□□□□ 0.07
CAPN1-226ENST00000533820 IGFBPL1Q8WX77 278 aa15.48■□□□□ 0.07
CAPN1-226ENST00000533820 DCHS2Q6V1P9 2916 aa15.47■□□□□ 0.07
CAPN1-226ENST00000533820 FSTL3O95633 263 aa15.47■□□□□ 0.07
CAPN1-226ENST00000533820 ATP5IP56385 69 aaPredicted RBP15.47■□□□□ 0.07
CAPN1-226ENST00000533820 PLP1P60201 277 aa15.47■□□□□ 0.07
CAPN1-226ENST00000533820 SHISA2Q6UWI4 295 aa15.47■□□□□ 0.07
CAPN1-226ENST00000533820 VMA21Q3ZAQ7 101 aa15.47■□□□□ 0.07
CAPN1-226ENST00000533820 SIGMAR1Q99720 223 aa15.47■□□□□ 0.07
CAPN1-226ENST00000533820 hDV102S1A0JD36 115 aa15.47■□□□□ 0.07
CAPN1-226ENST00000533820 LYNX1G3V0Z9 82 aa15.47■□□□□ 0.07
CAPN1-226ENST00000533820 LYNX1P0DP58 116 aa15.47■□□□□ 0.07
CAPN1-226ENST00000533820 C7orf71A4D174 169 aa15.46■□□□□ 0.07
CAPN1-226ENST00000533820 TMEM178BH3BS89 294 aa15.46■□□□□ 0.07
CAPN1-226ENST00000533820 PERPQ96FX8 193 aa15.46■□□□□ 0.07
CAPN1-226ENST00000533820 C16orf97H3BN30 126 aa15.46■□□□□ 0.07
CAPN1-226ENST00000533820 LYZP61626 148 aa15.46■□□□□ 0.07
CAPN1-226ENST00000533820 MEF2CQ06413 473 aaPredicted RBP15.46■□□□□ 0.07
CAPN1-226ENST00000533820 SSX8Q7RTT4 187 aa15.46■□□□□ 0.07
CAPN1-226ENST00000533820 A0A0G2JNJ9 132 aa15.45■□□□□ 0.06
CAPN1-226ENST00000533820 SNAI2O43623 268 aa15.45■□□□□ 0.06
CAPN1-226ENST00000533820 GTSF1Q8WW33 167 aa15.45■□□□□ 0.06
CAPN1-226ENST00000533820 Q9UFV3 132 aa15.45■□□□□ 0.06
CAPN1-226ENST00000533820 CSN3P07498 182 aa15.45■□□□□ 0.06
CAPN1-226ENST00000533820 EXOC3-AS1Q8N2X6 119 aa15.45■□□□□ 0.06
CAPN1-226ENST00000533820 CIARTQ8N365 385 aaPredicted RBP15.45■□□□□ 0.06
CAPN1-226ENST00000533820 DYNLRB1Q9NP97 96 aa15.45■□□□□ 0.06
CAPN1-226ENST00000533820 P01737 135 aa15.45■□□□□ 0.06
CAPN1-226ENST00000533820 LOXP28300 417 aaPredicted RBP15.45■□□□□ 0.06
CAPN1-226ENST00000533820 FAM231DQ6ZW35 169 aa15.45■□□□□ 0.06
CAPN1-226ENST00000533820 GPR82Q96P67 336 aa15.45■□□□□ 0.06
CAPN1-226ENST00000533820 KLK10O43240 276 aa15.44■□□□□ 0.06
CAPN1-226ENST00000533820 Q6ZS92 163 aa15.44■□□□□ 0.06
CAPN1-226ENST00000533820 AP1S3Q96PC3 154 aa15.44■□□□□ 0.06
CAPN1-226ENST00000533820 Q9H3A6 140 aa15.44■□□□□ 0.06
CAPN1-226ENST00000533820 C7orf69Q9H7B7 122 aa15.44■□□□□ 0.06
CAPN1-226ENST00000533820 FBLL1A6NHQ2 334 aaKnown RBP15.44■□□□□ 0.06
CAPN1-226ENST00000533820 CEACAM4O75871 244 aa15.44■□□□□ 0.06
CAPN1-226ENST00000533820 COX7A1P24310 79 aa15.44■□□□□ 0.06
CAPN1-226ENST00000533820 DAZAP1Q96EP5 407 aaKnown RBP15.44■□□□□ 0.06
CAPN1-226ENST00000533820 URB1-AS1Q96HZ7 61 aa15.44■□□□□ 0.06
CAPN1-226ENST00000533820 S4R3C0 116 aa15.44■□□□□ 0.06
CAPN1-226ENST00000533820 RPP21Q9H633 154 aaKnown RBP15.43■□□□□ 0.06
CAPN1-226ENST00000533820 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP15.43■□□□□ 0.06
CAPN1-226ENST00000533820 RPL27AP46776 148 aaKnown RBP15.43■□□□□ 0.06
CAPN1-226ENST00000533820 PRNTQ86SH4 94 aa15.43■□□□□ 0.06
CAPN1-226ENST00000533820 THAP8Q8NA92 274 aa15.43■□□□□ 0.06
CAPN1-226ENST00000533820 PRSS33Q8NF86 280 aa15.43■□□□□ 0.06
CAPN1-226ENST00000533820 PMCHL2Q9BQD1 86 aa15.43■□□□□ 0.06
CAPN1-226ENST00000533820 ASH1LQ9NR48 2969 aaKnown RBP15.43■□□□□ 0.06
CAPN1-226ENST00000533820 A0A1W2PRD5 423 aa15.42■□□□□ 0.06
CAPN1-226ENST00000533820 A0A1W2PRF3 423 aa15.42■□□□□ 0.06
CAPN1-226ENST00000533820 A0A1W2PRM7 423 aa15.42■□□□□ 0.06
CAPN1-226ENST00000533820 CD5LO43866 347 aa15.42■□□□□ 0.06
CAPN1-226ENST00000533820 THBDP07204 575 aa15.42■□□□□ 0.06
CAPN1-226ENST00000533820 HBBP68871 147 aa15.42■□□□□ 0.06
CAPN1-226ENST00000533820 MRGPRG-AS1Q2M3A8 158 aa15.42■□□□□ 0.06
CAPN1-226ENST00000533820 WIPF2Q8TF74 440 aaPredicted RBP15.42■□□□□ 0.06
CAPN1-226ENST00000533820 TPPP3Q9BW30 176 aa15.42■□□□□ 0.06
CAPN1-226ENST00000533820 SVEP1Q4LDE5 3571 aa15.42■□□□□ 0.06
CAPN1-226ENST00000533820 RBP4P02753 201 aa15.42■□□□□ 0.06
CAPN1-226ENST00000533820 MYCNOSP40205 109 aa15.42■□□□□ 0.06
CAPN1-226ENST00000533820 C2orf70A6NJV1 201 aa15.42■□□□□ 0.06
CAPN1-226ENST00000533820 H3BUT2 72 aa15.42■□□□□ 0.06
CAPN1-226ENST00000533820 TMEM30BQ3MIR4 351 aa15.42■□□□□ 0.06
CAPN1-226ENST00000533820 GOLT1AQ6ZVE7 132 aa15.42■□□□□ 0.06
CAPN1-226ENST00000533820 GTF2H5Q6ZYL4 71 aa15.42■□□□□ 0.06
CAPN1-226ENST00000533820 FAM57AQ8TBR7 257 aa15.42■□□□□ 0.06
CAPN1-226ENST00000533820 FBXL15Q9H469 300 aa15.42■□□□□ 0.06
CAPN1-226ENST00000533820 IGHV1-8P0DP01 117 aa15.41■□□□□ 0.06
CAPN1-226ENST00000533820 FOXE3Q13461 319 aa15.41■□□□□ 0.06
CAPN1-226ENST00000533820 C12orf54Q6X4T0 127 aa15.41■□□□□ 0.06
CAPN1-226ENST00000533820 NUP37Q8NFH4 326 aa15.41■□□□□ 0.06
CAPN1-226ENST00000533820 JMJD8Q96S16 334 aa15.41■□□□□ 0.06
CAPN1-226ENST00000533820 SPTBN1Q01082 2364 aaKnown RBP15.41■□□□□ 0.06
CAPN1-226ENST00000533820 K7EQM0 130 aa15.4■□□□□ 0.06
CAPN1-226ENST00000533820 TCRAP04437 139 aa15.4■□□□□ 0.06
CAPN1-226ENST00000533820 COL8A1P27658 744 aa15.4■□□□□ 0.06
CAPN1-226ENST00000533820 A8MWL6 223 aa15.4■□□□□ 0.06
CAPN1-226ENST00000533820 PLGLAQ15195 96 aa15.4■□□□□ 0.06
CAPN1-226ENST00000533820 SLC25A34Q6PIV7 304 aa15.4■□□□□ 0.06
CAPN1-226ENST00000533820 OR8B3Q8NGG8 313 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms