RNA–Protein interactions for RNA: ENST00000533526.1

ATM-220, Transcript of ATM serine/threonine kinase, humanhuman

TSL 1 (best)

Gene ATM, Length 234 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-220ENST00000533526 SRIP30626 198 aa-0.02□□□□□ -2.41
ATM-220ENST00000533526 CEBPGP53567 150 aa-0.02□□□□□ -2.41
ATM-220ENST00000533526 RANP62826 216 aaKnown RBP-0.02□□□□□ -2.41
ATM-220ENST00000533526 TMEM97Q5BJF2 176 aa-0.02□□□□□ -2.41
ATM-220ENST00000533526 BCL2L15Q5TBC7 163 aa-0.02□□□□□ -2.41
ATM-220ENST00000533526 OR51A2Q8NGJ7 313 aa-0.02□□□□□ -2.41
ATM-220ENST00000533526 MUCL1Q96DR8 90 aa-0.02□□□□□ -2.41
ATM-220ENST00000533526 FAM103A1Q9BTL3 118 aaKnown RBP-0.02□□□□□ -2.41
ATM-220ENST00000533526 TNCP24821 2201 aa-0.02□□□□□ -2.41
ATM-220ENST00000533526 ZGRF1Q86YA3 2104 aa-0.02□□□□□ -2.41
ATM-220ENST00000533526 TNXBP22105 4242 aa-0.02□□□□□ -2.41
ATM-220ENST00000533526 MYLKQ15746 1914 aa-0.03□□□□□ -2.41
ATM-220ENST00000533526 ZDBF2Q9HCK1 2354 aa-0.03□□□□□ -2.41
ATM-220ENST00000533526 A0A087WSZ3 146 aa-0.03□□□□□ -2.41
ATM-220ENST00000533526 TRBV30A0A0K0K1B3 111 aa-0.03□□□□□ -2.41
ATM-220ENST00000533526 GGCTO75223 188 aaKnown RBP-0.03□□□□□ -2.41
ATM-220ENST00000533526 RPP14O95059 124 aaKnown RBP-0.03□□□□□ -2.41
ATM-220ENST00000533526 PIGPP57054 158 aa-0.03□□□□□ -2.41
ATM-220ENST00000533526 RRN3P1Q2M238 152 aa-0.03□□□□□ -2.41
ATM-220ENST00000533526 SPINK6Q6UWN8 80 aa-0.03□□□□□ -2.41
ATM-220ENST00000533526 OR5AS1Q8N127 324 aa-0.03□□□□□ -2.41
ATM-220ENST00000533526 NABP2Q9BQ15 211 aa-0.03□□□□□ -2.41
ATM-220ENST00000533526 WFDC10AQ9H1F0 79 aa-0.03□□□□□ -2.41
ATM-220ENST00000533526 CTNNBIP1Q9NSA3 81 aaPredicted RBP-0.03□□□□□ -2.41
ATM-220ENST00000533526 UQCC1Q9NVA1 299 aa-0.03□□□□□ -2.41
ATM-220ENST00000533526 OR52A1Q9UKL2 312 aa-0.03□□□□□ -2.41
ATM-220ENST00000533526 ASH1LQ9NR48 2969 aaKnown RBP-0.03□□□□□ -2.41
ATM-220ENST00000533526 MIA2Q96PC5 1412 aa-0.04□□□□□ -2.42
ATM-220ENST00000533526 TRAV4A0A0B4J268 109 aa-0.04□□□□□ -2.42
ATM-220ENST00000533526 NUPR2A6NF83 97 aa-0.04□□□□□ -2.42
ATM-220ENST00000533526 C5orf67F2Z3F1 127 aa-0.04□□□□□ -2.42
ATM-220ENST00000533526 PPYP01298 95 aa-0.04□□□□□ -2.42
ATM-220ENST00000533526 CCL4P13236 92 aa-0.04□□□□□ -2.42
ATM-220ENST00000533526 ERP29P30040 261 aaKnown RBP-0.04□□□□□ -2.42
ATM-220ENST00000533526 CDK6Q00534 326 aa-0.04□□□□□ -2.42
ATM-220ENST00000533526 PTRHD1Q6GMV3 140 aaKnown RBP-0.04□□□□□ -2.42
ATM-220ENST00000533526 GLIPR1L1Q6UWM5 242 aa-0.04□□□□□ -2.42
ATM-220ENST00000533526 OR10AG1Q8NH19 301 aa-0.04□□□□□ -2.42
ATM-220ENST00000533526 ZC2HC1AQ96GY0 325 aa-0.04□□□□□ -2.42
ATM-220ENST00000533526 CCDC94Q9BW85 323 aaPredicted RBP-0.04□□□□□ -2.42
ATM-220ENST00000533526 PRELID3BQ9Y3B1 194 aa-0.04□□□□□ -2.42
ATM-220ENST00000533526 PCF11O94913 1555 aaKnown RBP-0.04□□□□□ -2.42
ATM-220ENST00000533526 ANK1P16157 1881 aa-0.04□□□□□ -2.42
ATM-220ENST00000533526 SSPOA2VEC9 5147 aa-0.04□□□□□ -2.42
ATM-220ENST00000533526 LOC285556D6RIA3 1793 aa-0.04□□□□□ -2.42
ATM-220ENST00000533526 TANC2Q9HCD6 1990 aa-0.05□□□□□ -2.42
ATM-220ENST00000533526 RFX7Q2KHR2 1363 aa-0.05□□□□□ -2.42
ATM-220ENST00000533526 FREM3P0C091 2139 aa-0.05□□□□□ -2.42
ATM-220ENST00000533526 FRMPD1Q5SYB0 1578 aa-0.05□□□□□ -2.42
ATM-220ENST00000533526 XIRP1Q702N8 1843 aaKnown RBP-0.05□□□□□ -2.42
ATM-220ENST00000533526 TRBV19A0A075B6N1 114 aa-0.05□□□□□ -2.42
ATM-220ENST00000533526 OR7C1O76099 320 aaPredicted RBP-0.05□□□□□ -2.42
ATM-220ENST00000533526 HAND1O96004 215 aa-0.05□□□□□ -2.42
ATM-220ENST00000533526 OR10J4P0C629 311 aa-0.05□□□□□ -2.42
ATM-220ENST00000533526 VBP1P61758 197 aa-0.05□□□□□ -2.42
ATM-220ENST00000533526 UBE2BP63146 152 aa-0.05□□□□□ -2.42
ATM-220ENST00000533526 Q8TAT8 98 aa-0.05□□□□□ -2.42
ATM-220ENST00000533526 GNPDA2Q8TDQ7 276 aa-0.05□□□□□ -2.42
ATM-220ENST00000533526 SPRR2GQ9BYE4 73 aa-0.05□□□□□ -2.42
ATM-220ENST00000533526 IMUPQ9GZP8 106 aa-0.05□□□□□ -2.42
ATM-220ENST00000533526 RNASE7Q9H1E1 156 aaKnown RBP-0.05□□□□□ -2.42
ATM-220ENST00000533526 TCEAL2Q9H3H9 227 aaPredicted RBP-0.05□□□□□ -2.42
ATM-220ENST00000533526 PARVBQ9HBI1 364 aa-0.05□□□□□ -2.42
ATM-220ENST00000533526 SPTBP11277 2137 aa-0.05□□□□□ -2.42
ATM-220ENST00000533526 CAMSAP1Q5T5Y3 1602 aa-0.05□□□□□ -2.42
ATM-220ENST00000533526 MAP2P11137 1827 aaKnown RBP-0.06□□□□□ -2.42
ATM-220ENST00000533526 KIDINS220Q9ULH0 1771 aa-0.06□□□□□ -2.42
ATM-220ENST00000533526 SIPA1L2Q9P2F8 1722 aaPredicted RBP-0.06□□□□□ -2.42
ATM-220ENST00000533526 MYH1P12882 1939 aa-0.06□□□□□ -2.42
ATM-220ENST00000533526 M0R233 179 aa-0.06□□□□□ -2.42
ATM-220ENST00000533526 IFNA7P01567 189 aa-0.06□□□□□ -2.42
ATM-220ENST00000533526 RPS17P08708 135 aaKnown RBP-0.06□□□□□ -2.42
ATM-220ENST00000533526 DEFA3P59666 94 aa-0.06□□□□□ -2.42
ATM-220ENST00000533526 MYL6P60660 151 aa-0.06□□□□□ -2.42
ATM-220ENST00000533526 QRFPP83859 136 aa-0.06□□□□□ -2.42
ATM-220ENST00000533526 AESQ08117 197 aa-0.06□□□□□ -2.42
ATM-220ENST00000533526 STAG3L4Q8TBR4 150 aa-0.06□□□□□ -2.42
ATM-220ENST00000533526 RAB37Q96AX2 223 aa-0.06□□□□□ -2.42
ATM-220ENST00000533526 HRNRQ86YZ3 2850 aaPredicted RBP-0.06□□□□□ -2.42
ATM-220ENST00000533526 CCDC144AA2RUR9 1427 aa-0.06□□□□□ -2.42
ATM-220ENST00000533526 BCL9O00512 1426 aa-0.06□□□□□ -2.42
ATM-220ENST00000533526 ERBINQ96RT1 1412 aa-0.06□□□□□ -2.42
ATM-220ENST00000533526 PLXNA2O75051 1894 aa-0.07□□□□□ -2.42
ATM-220ENST00000533526 FER1L6Q2WGJ9 1857 aa-0.07□□□□□ -2.42
ATM-220ENST00000533526 NUP210Q8TEM1 1887 aaPredicted RBP-0.07□□□□□ -2.42
ATM-220ENST00000533526 USP54Q70EL1 1684 aa-0.07□□□□□ -2.42
ATM-220ENST00000533526 MUC2Q02817 5179 aa-0.07□□□□□ -2.42
ATM-220ENST00000533526 AFDNP55196 1824 aaKnown RBP-0.07□□□□□ -2.42
ATM-220ENST00000533526 KIAA1549LQ6ZVL6 1849 aa-0.07□□□□□ -2.42
ATM-220ENST00000533526 TRAV23DV6A0A075B6W5 121 aa-0.07□□□□□ -2.42
ATM-220ENST00000533526 TRAV27A0A087WT01 109 aa-0.07□□□□□ -2.42
ATM-220ENST00000533526 FAM159BA6NKW6 160 aa-0.07□□□□□ -2.42
ATM-220ENST00000533526 TAX1BP3O14907 124 aa-0.07□□□□□ -2.42
ATM-220ENST00000533526 LYPLA2O95372 231 aa-0.07□□□□□ -2.42
ATM-220ENST00000533526 C1QBP02746 253 aa-0.07□□□□□ -2.42
ATM-220ENST00000533526 CYBAP13498 195 aa-0.07□□□□□ -2.42
ATM-220ENST00000533526 HLA-EP13747 358 aa-0.07□□□□□ -2.42
ATM-220ENST00000533526 RAB5CP51148 216 aa-0.07□□□□□ -2.42
ATM-220ENST00000533526 EIF5AL1Q6IS14 154 aaKnown RBP-0.07□□□□□ -2.42
ATM-220ENST00000533526 Q6ZQY7 126 aa-0.07□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms