RNA–Protein interactions for RNA: ENST00000531857.1

PKP3-208, Transcript of plakophilin 3, humanhuman

TSL 4

Gene PKP3, Length 687 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-208ENST00000531857 RELQ04864 619 aaPredicted RBP12.61□□□□□ -0.39
PKP3-208ENST00000531857 FAM74A1Q5RGS3 127 aa12.61□□□□□ -0.39
PKP3-208ENST00000531857 LEMD1Q68G75 181 aa12.61□□□□□ -0.39
PKP3-208ENST00000531857 OR10P1Q8NGE3 313 aa12.61□□□□□ -0.39
PKP3-208ENST00000531857 WFDC1Q9HC57 220 aa12.61□□□□□ -0.39
PKP3-208ENST00000531857 I3L2K1 104 aa12.6□□□□□ -0.39
PKP3-208ENST00000531857 IFNA17P01571 189 aa12.6□□□□□ -0.39
PKP3-208ENST00000531857 APOHP02749 345 aaPredicted RBP12.6□□□□□ -0.39
PKP3-208ENST00000531857 RAB11AP62491 216 aa12.6□□□□□ -0.39
PKP3-208ENST00000531857 TCF24Q7RTU0 167 aa12.6□□□□□ -0.39
PKP3-208ENST00000531857 CCDC28AQ8IWP9 274 aa12.6□□□□□ -0.39
PKP3-208ENST00000531857 LILRB2Q8N423 598 aa12.6□□□□□ -0.39
PKP3-208ENST00000531857 FAM24BQ8N5W8 94 aa12.6□□□□□ -0.39
PKP3-208ENST00000531857 OR1P1Q8NH06 330 aa12.6□□□□□ -0.39
PKP3-208ENST00000531857 MISP3Q96FF7 219 aa12.6□□□□□ -0.39
PKP3-208ENST00000531857 ENY2Q9NPA8 101 aa12.6□□□□□ -0.39
PKP3-208ENST00000531857 C15orf61A6NNL5 157 aa12.59□□□□□ -0.39
PKP3-208ENST00000531857 CST7O76096 145 aa12.59□□□□□ -0.39
PKP3-208ENST00000531857 HBE1P02100 147 aa12.59□□□□□ -0.39
PKP3-208ENST00000531857 MBP02144 154 aa12.59□□□□□ -0.39
PKP3-208ENST00000531857 RBMY1A1P0DJD3 496 aaKnown RBP12.59□□□□□ -0.39
PKP3-208ENST00000531857 RBMY1CP0DJD4 496 aa12.59□□□□□ -0.39
PKP3-208ENST00000531857 CAMLGP49069 296 aa12.59□□□□□ -0.39
PKP3-208ENST00000531857 MFAP4P55083 255 aa12.59□□□□□ -0.39
PKP3-208ENST00000531857 DEFB131AP59861 70 aa12.59□□□□□ -0.39
PKP3-208ENST00000531857 HSPE1P61604 102 aaKnown RBP12.59□□□□□ -0.39
PKP3-208ENST00000531857 CLINT1Q14677 625 aa12.59□□□□□ -0.39
PKP3-208ENST00000531857 RBMY1FQ15415 496 aaKnown RBP12.59□□□□□ -0.39
PKP3-208ENST00000531857 TOR2AQ5JU69 321 aa12.59□□□□□ -0.39
PKP3-208ENST00000531857 SPANXN5Q5MJ07 72 aa12.59□□□□□ -0.39
PKP3-208ENST00000531857 Q8NAQ8 132 aa12.59□□□□□ -0.39
PKP3-208ENST00000531857 OR2G3Q8NGZ4 309 aa12.59□□□□□ -0.39
PKP3-208ENST00000531857 TMEM147Q9BVK8 224 aa12.59□□□□□ -0.39
PKP3-208ENST00000531857 MPDU1O75352 247 aa12.58□□□□□ -0.4
PKP3-208ENST00000531857 ATP6V0CP27449 155 aa12.58□□□□□ -0.4
PKP3-208ENST00000531857 AKR1C8PQ5T2L2 129 aa12.58□□□□□ -0.4
PKP3-208ENST00000531857 PXDC1Q5TGL8 231 aa12.58□□□□□ -0.4
PKP3-208ENST00000531857 PBDC1Q9BVG4 233 aa12.58□□□□□ -0.4
PKP3-208ENST00000531857 MS4A6AQ9H2W1 248 aa12.58□□□□□ -0.4
PKP3-208ENST00000531857 TMEM14BQ9NUH8 114 aa12.58□□□□□ -0.4
PKP3-208ENST00000531857 MUC4Q99102 2169 aa12.57□□□□□ -0.4
PKP3-208ENST00000531857 IGHV3-66A0A0C4DH42 116 aa12.57□□□□□ -0.4
PKP3-208ENST00000531857 C11orf94C9JXX5 98 aa12.57□□□□□ -0.4
PKP3-208ENST00000531857 FNDC10F2Z333 226 aa12.57□□□□□ -0.4
PKP3-208ENST00000531857 INS-IGF2F8WCM5 200 aa12.57□□□□□ -0.4
PKP3-208ENST00000531857 MT-CO2P00403 227 aa12.57□□□□□ -0.4
PKP3-208ENST00000531857 GIG44P09565 113 aaPredicted RBP12.57□□□□□ -0.4
PKP3-208ENST00000531857 IAPPP10997 89 aa12.57□□□□□ -0.4
PKP3-208ENST00000531857 PAFAH1B2P68402 229 aa12.57□□□□□ -0.4
PKP3-208ENST00000531857 SLC38A11Q08AI6 406 aa12.57□□□□□ -0.4
PKP3-208ENST00000531857 TOMM20LQ6UXN7 152 aa12.57□□□□□ -0.4
PKP3-208ENST00000531857 HSD17B11Q8NBQ5 300 aa12.57□□□□□ -0.4
PKP3-208ENST00000531857 PCNPQ8WW12 178 aaKnown RBP12.57□□□□□ -0.4
PKP3-208ENST00000531857 TXN2Q99757 166 aa12.57□□□□□ -0.4
PKP3-208ENST00000531857 HRH4Q9H3N8 390 aa12.57□□□□□ -0.4
PKP3-208ENST00000531857 VSIRQ9H7M9 311 aa12.57□□□□□ -0.4
PKP3-208ENST00000531857 KCNIP2Q9NS61 270 aa12.57□□□□□ -0.4
PKP3-208ENST00000531857 IGHV4-28A0A0C4DH34 117 aa12.56□□□□□ -0.4
PKP3-208ENST00000531857 A0A1B0GVY2 172 aa12.56□□□□□ -0.4
PKP3-208ENST00000531857 C17orf112F2Z3M2 114 aa12.56□□□□□ -0.4
PKP3-208ENST00000531857 GNG7O60262 68 aa12.56□□□□□ -0.4
PKP3-208ENST00000531857 METTL15P1P0C7V9 234 aa12.56□□□□□ -0.4
PKP3-208ENST00000531857 PEA15Q15121 130 aa12.56□□□□□ -0.4
PKP3-208ENST00000531857 IZUMO4Q1ZYL8 232 aa12.56□□□□□ -0.4
PKP3-208ENST00000531857 VWC2Q2TAL6 325 aa12.56□□□□□ -0.4
PKP3-208ENST00000531857 Q6ZRG5 221 aa12.56□□□□□ -0.4
PKP3-208ENST00000531857 UQCC1Q9NVA1 299 aa12.56□□□□□ -0.4
PKP3-208ENST00000531857 TRAV1-1A0A0B4J248 108 aa12.55□□□□□ -0.4
PKP3-208ENST00000531857 DNASE2O00115 360 aaPredicted RBP12.55□□□□□ -0.4
PKP3-208ENST00000531857 HLA-DMBP28068 263 aa12.55□□□□□ -0.4
PKP3-208ENST00000531857 Q6ZTC4 211 aa12.55□□□□□ -0.4
PKP3-208ENST00000531857 ZNF709Q8N972 641 aa12.55□□□□□ -0.4
PKP3-208ENST00000531857 WDR61Q9GZS3 305 aaKnown RBP12.55□□□□□ -0.4
PKP3-208ENST00000531857 HEYLQ9NQ87 328 aaPredicted RBP12.55□□□□□ -0.4
PKP3-208ENST00000531857 RYR1P21817 5038 aa12.54□□□□□ -0.4
PKP3-208ENST00000531857 FAT2Q9NYQ8 4349 aa12.54□□□□□ -0.4
PKP3-208ENST00000531857 IGHV4-4A0A075B6R2 117 aa12.54□□□□□ -0.4
PKP3-208ENST00000531857 NXPH3O95157 252 aa12.54□□□□□ -0.4
PKP3-208ENST00000531857 CD5P06127 495 aa12.54□□□□□ -0.4
PKP3-208ENST00000531857 RPL11P62913 178 aaKnown RBP12.54□□□□□ -0.4
PKP3-208ENST00000531857 DLK1P80370 383 aa12.54□□□□□ -0.4
PKP3-208ENST00000531857 LINC00336Q6ZUF6 198 aa12.54□□□□□ -0.4
PKP3-208ENST00000531857 STHQ8IWL8 128 aa12.54□□□□□ -0.4
PKP3-208ENST00000531857 ZNF114Q8NC26 417 aa12.54□□□□□ -0.4
PKP3-208ENST00000531857 ZFAND3Q9H8U3 227 aa12.54□□□□□ -0.4
PKP3-208ENST00000531857 PKHD1P08F94 4074 aa12.54□□□□□ -0.4
PKP3-208ENST00000531857 ELOA3CA0A087WX78 387 aaPredicted RBP12.53□□□□□ -0.4
PKP3-208ENST00000531857 H3BP45 60 aa12.53□□□□□ -0.4
PKP3-208ENST00000531857 NDUFS6O75380 124 aaKnown RBP12.53□□□□□ -0.4
PKP3-208ENST00000531857 IFNA10P01566 189 aa12.53□□□□□ -0.4
PKP3-208ENST00000531857 TAGLN2P37802 199 aaKnown RBP12.53□□□□□ -0.4
PKP3-208ENST00000531857 HOXA1P49639 335 aaPredicted RBP12.53□□□□□ -0.4
PKP3-208ENST00000531857 PRCDQ00LT1 54 aa12.53□□□□□ -0.4
PKP3-208ENST00000531857 RABAC1Q9UI14 185 aa12.53□□□□□ -0.4
PKP3-208ENST00000531857 PUS1Q9Y606 427 aaKnown RBP eCLIP12.53□□□□□ -0.4
PKP3-208ENST00000531857 X6R8D5 127 aa12.53□□□□□ -0.4
PKP3-208ENST00000531857 TRAV2A0A0B4J234 112 aa12.52□□□□□ -0.41
PKP3-208ENST00000531857 TRAV10A0A0B4J240 114 aa12.52□□□□□ -0.41
PKP3-208ENST00000531857 TMEM218A2RU14 115 aa12.52□□□□□ -0.41
PKP3-208ENST00000531857 PMS2P5A8MQ11 134 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms