RNA–Protein interactions for RNA: ENST00000531118.5

CD44-232, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 877 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-232ENST00000531118 ZNF2Q9BSG1 426 aaPredicted RBP5.51□□□□□ -1.53
CD44-232ENST00000531118 TMPRSS5Q9H3S3 457 aa5.51□□□□□ -1.53
CD44-232ENST00000531118 TRAV18A0A075B6X5 111 aa5.5□□□□□ -1.53
CD44-232ENST00000531118 SMIM31A0A1B0GVY4 71 aa5.5□□□□□ -1.53
CD44-232ENST00000531118 GAGE12BA1L429 117 aa5.5□□□□□ -1.53
CD44-232ENST00000531118 GAGE12HA6NDE8 117 aa5.5□□□□□ -1.53
CD44-232ENST00000531118 RS1O15537 224 aa5.5□□□□□ -1.53
CD44-232ENST00000531118 GAGE7O76087 117 aa5.5□□□□□ -1.53
CD44-232ENST00000531118 DUSP14O95147 198 aaKnown RBP5.5□□□□□ -1.53
CD44-232ENST00000531118 NXPH3O95157 252 aa5.5□□□□□ -1.53
CD44-232ENST00000531118 GAGE12FP0CL80 117 aa5.5□□□□□ -1.53
CD44-232ENST00000531118 GAGE12GP0CL81 117 aa5.5□□□□□ -1.53
CD44-232ENST00000531118 GAGE12IP0CL82 117 aa5.5□□□□□ -1.53
CD44-232ENST00000531118 MT1HL1P0DM35 61 aa5.5□□□□□ -1.53
CD44-232ENST00000531118 SLC25A4P12235 298 aa5.5□□□□□ -1.53
CD44-232ENST00000531118 HTN1P15515 57 aa5.5□□□□□ -1.53
CD44-232ENST00000531118 CBX5P45973 191 aa5.5□□□□□ -1.53
CD44-232ENST00000531118 MEOX2P50222 304 aa5.5□□□□□ -1.53
CD44-232ENST00000531118 NHLH2Q02577 135 aa5.5□□□□□ -1.53
CD44-232ENST00000531118 ZNF493Q6ZR52 646 aa5.5□□□□□ -1.53
CD44-232ENST00000531118 GPR141Q7Z602 305 aa5.5□□□□□ -1.53
CD44-232ENST00000531118 PDCD10Q9BUL8 212 aa5.5□□□□□ -1.53
CD44-232ENST00000531118 PBDC1Q9BVG4 233 aa5.5□□□□□ -1.53
CD44-232ENST00000531118 ENY2Q9NPA8 101 aa5.5□□□□□ -1.53
CD44-232ENST00000531118 LY96Q9Y6Y9 160 aa5.5□□□□□ -1.53
CD44-232ENST00000531118 MEIS3P1A6NDR6 274 aa5.49□□□□□ -1.53
CD44-232ENST00000531118 ZNF98A6NK75 572 aa5.49□□□□□ -1.53
CD44-232ENST00000531118 IGKV1-5P01602 117 aa5.49□□□□□ -1.53
CD44-232ENST00000531118 RLN2P04090 185 aa5.49□□□□□ -1.53
CD44-232ENST00000531118 RD3LP0DJH9 198 aa5.49□□□□□ -1.53
CD44-232ENST00000531118 PSG1P11464 419 aa5.49□□□□□ -1.53
CD44-232ENST00000531118 LSM3P62310 102 aaKnown RBP5.49□□□□□ -1.53
CD44-232ENST00000531118 UBE2NLQ5JXB2 153 aa5.49□□□□□ -1.53
CD44-232ENST00000531118 TBC1D26Q86UD7 250 aa5.49□□□□□ -1.53
CD44-232ENST00000531118 SLC24A4Q8NFF2 622 aa5.49□□□□□ -1.53
CD44-232ENST00000531118 AP3S1Q92572 193 aa5.49□□□□□ -1.53
CD44-232ENST00000531118 YIPF6Q96EC8 236 aa5.49□□□□□ -1.53
CD44-232ENST00000531118 SLC25A39Q9BZJ4 359 aaPredicted RBP5.49□□□□□ -1.53
CD44-232ENST00000531118 IFT46Q9NQC8 304 aa5.49□□□□□ -1.53
CD44-232ENST00000531118 TRAV9-2A0A087WT02 112 aa5.48□□□□□ -1.53
CD44-232ENST00000531118 A0A0B4J293 547 aa5.48□□□□□ -1.53
CD44-232ENST00000531118 PSCAO43653 123 aa5.48□□□□□ -1.53
CD44-232ENST00000531118 ZNF182P17025 639 aaPredicted RBP5.48□□□□□ -1.53
CD44-232ENST00000531118 ETV6P41212 452 aa5.48□□□□□ -1.53
CD44-232ENST00000531118 HTR2BP41595 481 aa5.48□□□□□ -1.53
CD44-232ENST00000531118 AKR1C2P52895 323 aa5.48□□□□□ -1.53
CD44-232ENST00000531118 TAS2R20P59543 309 aa5.48□□□□□ -1.53
CD44-232ENST00000531118 C1orf194Q5T5A4 169 aa5.48□□□□□ -1.53
CD44-232ENST00000531118 MZT2AQ6P582 158 aa5.48□□□□□ -1.53
CD44-232ENST00000531118 WFDC10BQ8IUB3 73 aa5.48□□□□□ -1.53
CD44-232ENST00000531118 SAMD12Q8N8I0 201 aa5.48□□□□□ -1.53
CD44-232ENST00000531118 OR5H6Q8NGV6 325 aa5.48□□□□□ -1.53
CD44-232ENST00000531118 NPIPB3Q92617 1050 aa5.48□□□□□ -1.53
CD44-232ENST00000531118 SLC25A38Q96DW6 304 aa5.48□□□□□ -1.53
CD44-232ENST00000531118 ACY3Q96HD9 319 aa5.48□□□□□ -1.53
CD44-232ENST00000531118 FUNDC2Q9BWH2 189 aa5.48□□□□□ -1.53
CD44-232ENST00000531118 ICOSQ9Y6W8 199 aa5.48□□□□□ -1.53
CD44-232ENST00000531118 PRB4P10163 310 aaPredicted RBP5.47□□□□□ -1.53
CD44-232ENST00000531118 UCP1P25874 307 aa5.47□□□□□ -1.53
CD44-232ENST00000531118 S100GP29377 79 aa5.47□□□□□ -1.53
CD44-232ENST00000531118 PRSS3P35030 304 aa5.47□□□□□ -1.53
CD44-232ENST00000531118 RFX2P48378 723 aa5.47□□□□□ -1.53
CD44-232ENST00000531118 HNRNPA3P51991 378 aaKnown RBP5.47□□□□□ -1.53
CD44-232ENST00000531118 LYZP61626 148 aa5.47□□□□□ -1.53
CD44-232ENST00000531118 C2orf83Q53S99 150 aa5.47□□□□□ -1.53
CD44-232ENST00000531118 LCE5AQ5TCM9 118 aa5.47□□□□□ -1.53
CD44-232ENST00000531118 DHRS11Q6UWP2 260 aa5.47□□□□□ -1.53
CD44-232ENST00000531118 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.47□□□□□ -1.53
CD44-232ENST00000531118 OR8I2Q8N0Y5 310 aa5.47□□□□□ -1.53
CD44-232ENST00000531118 LRTM2Q8N967 370 aa5.47□□□□□ -1.53
CD44-232ENST00000531118 RNASEH2CQ8TDP1 164 aaKnown RBP5.47□□□□□ -1.53
CD44-232ENST00000531118 TMEM170AQ8WVE7 144 aa5.47□□□□□ -1.53
CD44-232ENST00000531118 RAB24Q969Q5 203 aa5.47□□□□□ -1.53
CD44-232ENST00000531118 RRNAD1Q96FB5 475 aaKnown RBP5.47□□□□□ -1.53
CD44-232ENST00000531118 MRPS26Q9BYN8 205 aaKnown RBP5.47□□□□□ -1.53
CD44-232ENST00000531118 KRTAP4-9Q9BYQ8 210 aa5.47□□□□□ -1.53
CD44-232ENST00000531118 SLC25A32Q9H2D1 315 aa5.47□□□□□ -1.53
CD44-232ENST00000531118 AUNIPQ9H7T9 357 aa5.47□□□□□ -1.53
CD44-232ENST00000531118 ANAPC10Q9UM13 185 aa5.47□□□□□ -1.53
CD44-232ENST00000531118 A0A0G2JRQ6 117 aa5.46□□□□□ -1.54
CD44-232ENST00000531118 SNURFLB1AK76 121 aa5.46□□□□□ -1.54
CD44-232ENST00000531118 H7BYZ3 331 aa5.46□□□□□ -1.54
CD44-232ENST00000531118 K7EP13 123 aa5.46□□□□□ -1.54
CD44-232ENST00000531118 APOA1P02647 267 aa5.46□□□□□ -1.54
CD44-232ENST00000531118 PMP2P02689 132 aa5.46□□□□□ -1.54
CD44-232ENST00000531118 EVI2AP22794 236 aa5.46□□□□□ -1.54
CD44-232ENST00000531118 TGFBR1P36897 503 aa5.46□□□□□ -1.54
CD44-232ENST00000531118 TAS2R46P59540 309 aa5.46□□□□□ -1.54
CD44-232ENST00000531118 VBP1P61758 197 aa5.46□□□□□ -1.54
CD44-232ENST00000531118 HIST1H1AQ02539 215 aaPredicted RBP5.46□□□□□ -1.54
CD44-232ENST00000531118 Q6ZTI0 123 aa5.46□□□□□ -1.54
CD44-232ENST00000531118 C10orf126Q8N4M7 172 aa5.46□□□□□ -1.54
CD44-232ENST00000531118 RNF182Q8N6D2 247 aa5.46□□□□□ -1.54
CD44-232ENST00000531118 OR5H2Q8NGV7 314 aa5.46□□□□□ -1.54
CD44-232ENST00000531118 C15orf40Q8WUR7 153 aa5.46□□□□□ -1.54
CD44-232ENST00000531118 PPP1R14BQ96C90 147 aa5.46□□□□□ -1.54
CD44-232ENST00000531118 COMMD3Q9UBI1 195 aa5.46□□□□□ -1.54
CD44-232ENST00000531118 TRAV8-2A0A0B4J237 113 aa5.45□□□□□ -1.54
CD44-232ENST00000531118 FAM25AB3EWG3 89 aa5.45□□□□□ -1.54
CD44-232ENST00000531118 FAM25CB3EWG5 89 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms