RNA–Protein interactions for RNA: ENST00000530546.5

USP35-207, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best)

Gene USP35, Length 2,986 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-207ENST00000530546 C7orf71A4D174 169 aa9.25□□□□□ -0.93
USP35-207ENST00000530546 SMIM17P0DL12 118 aa9.25□□□□□ -0.93
USP35-207ENST00000530546 GPR6P46095 362 aaPredicted RBP9.25□□□□□ -0.93
USP35-207ENST00000530546 PRR20EP86478 221 aa9.25□□□□□ -0.93
USP35-207ENST00000530546 PRR20CP86479 221 aa9.25□□□□□ -0.93
USP35-207ENST00000530546 PRR20DP86480 221 aa9.25□□□□□ -0.93
USP35-207ENST00000530546 PRR20BP86481 221 aa9.25□□□□□ -0.93
USP35-207ENST00000530546 PRR20AP86496 221 aa9.25□□□□□ -0.93
USP35-207ENST00000530546 FXYD3Q14802 87 aa9.25□□□□□ -0.93
USP35-207ENST00000530546 HCP5Q6MZN7 132 aa9.25□□□□□ -0.93
USP35-207ENST00000530546 PMCHL2Q9BQD1 86 aa9.25□□□□□ -0.93
USP35-207ENST00000530546 SMPXQ9UHP9 88 aa9.25□□□□□ -0.93
USP35-207ENST00000530546 MC5RP33032 325 aa9.25□□□□□ -0.93
USP35-207ENST00000530546 CEACAM3P40198 252 aa9.25□□□□□ -0.93
USP35-207ENST00000530546 SSBP2P81877 361 aaPredicted RBP9.25□□□□□ -0.93
USP35-207ENST00000530546 CD69Q07108 199 aa9.25□□□□□ -0.93
USP35-207ENST00000530546 PSG3Q16557 428 aa9.25□□□□□ -0.93
USP35-207ENST00000530546 NEGR1Q7Z3B1 354 aa9.25□□□□□ -0.93
USP35-207ENST00000530546 S100A7AQ86SG5 101 aa9.25□□□□□ -0.93
USP35-207ENST00000530546 C8orf31Q8N9H6 132 aa9.25□□□□□ -0.93
USP35-207ENST00000530546 C5orf17Q8NAS9 161 aa9.25□□□□□ -0.93
USP35-207ENST00000530546 C22orf46C9J442 243 aa9.24□□□□□ -0.93
USP35-207ENST00000530546 SYS1-DBNDD2H3BUS1 97 aa9.24□□□□□ -0.93
USP35-207ENST00000530546 TMEM167BQ9NRX6 74 aa9.24□□□□□ -0.93
USP35-207ENST00000530546 IGHV3-21A0A0B4J1V1 117 aa9.24□□□□□ -0.93
USP35-207ENST00000530546 A0A1W2PPI3 338 aa9.24□□□□□ -0.93
USP35-207ENST00000530546 GPR183P32249 361 aa9.24□□□□□ -0.93
USP35-207ENST00000530546 ZNF137PP52743 207 aa9.24□□□□□ -0.93
USP35-207ENST00000530546 PSG5Q15238 335 aa9.24□□□□□ -0.93
USP35-207ENST00000530546 RPEQ96AT9 228 aa9.24□□□□□ -0.93
USP35-207ENST00000530546 CHRDL1Q9BU40 450 aa9.24□□□□□ -0.93
USP35-207ENST00000530546 BUB1B-PAK6H3BSN5 160 aa9.24□□□□□ -0.93
USP35-207ENST00000530546 NPIPB3Q92617 1050 aa9.24□□□□□ -0.93
USP35-207ENST00000530546 AP1S3Q96PC3 154 aa9.24□□□□□ -0.93
USP35-207ENST00000530546 FNDC4Q9H6D8 234 aaPredicted RBP9.24□□□□□ -0.93
USP35-207ENST00000530546 HIVEP3Q5T1R4 2406 aa9.23□□□□□ -0.93
USP35-207ENST00000530546 AKAP6Q13023 2319 aa9.23□□□□□ -0.93
USP35-207ENST00000530546 MED13LQ71F56 2210 aa9.23□□□□□ -0.93
USP35-207ENST00000530546 IGHV1-3A0A0C4DH29 117 aa9.23□□□□□ -0.93
USP35-207ENST00000530546 A0A1B0GV72 72 aa9.23□□□□□ -0.93
USP35-207ENST00000530546 IGLV1-47P01700 117 aa9.23□□□□□ -0.93
USP35-207ENST00000530546 FAM120AOSQ5T036 256 aa9.23□□□□□ -0.93
USP35-207ENST00000530546 OR4A5Q8NH83 315 aa9.23□□□□□ -0.93
USP35-207ENST00000530546 CHCHD1Q96BP2 118 aaKnown RBP9.23□□□□□ -0.93
USP35-207ENST00000530546 TIMD4Q96H15 378 aa9.23□□□□□ -0.93
USP35-207ENST00000530546 CLEC5AQ9NY25 188 aa9.23□□□□□ -0.93
USP35-207ENST00000530546 TP73-AS1Q9UF72 201 aa9.23□□□□□ -0.93
USP35-207ENST00000530546 HRNRQ86YZ3 2850 aaPredicted RBP9.23□□□□□ -0.93
USP35-207ENST00000530546 hDV102S1A0JD36 115 aa9.23□□□□□ -0.93
USP35-207ENST00000530546 K7EP34 96 aa9.23□□□□□ -0.93
USP35-207ENST00000530546 KIR3DL3Q8N743 410 aa9.23□□□□□ -0.93
USP35-207ENST00000530546 SERTAD4Q9NUC0 356 aa9.23□□□□□ -0.93
USP35-207ENST00000530546 MRPL36Q9P0J6 103 aaKnown RBP9.23□□□□□ -0.93
USP35-207ENST00000530546 FAM231BA6NCW3 169 aa9.22□□□□□ -0.93
USP35-207ENST00000530546 C9orf118A6NHY6 69 aa9.22□□□□□ -0.93
USP35-207ENST00000530546 IGLV2-8P01709 118 aa9.22□□□□□ -0.93
USP35-207ENST00000530546 UQCRFS1P47985 274 aa9.22□□□□□ -0.93
USP35-207ENST00000530546 KLRD1Q13241 179 aa9.22□□□□□ -0.93
USP35-207ENST00000530546 IGF2BP2-AS1Q96M15 143 aa9.22□□□□□ -0.93
USP35-207ENST00000530546 FBXL15Q9H469 300 aa9.22□□□□□ -0.93
USP35-207ENST00000530546 HILPDAQ9Y5L2 63 aa9.22□□□□□ -0.93
USP35-207ENST00000530546 TRAV5A0A0B4J249 113 aa9.22□□□□□ -0.93
USP35-207ENST00000530546 FNDC10F2Z333 226 aa9.22□□□□□ -0.93
USP35-207ENST00000530546 H3BRM9 83 aa9.22□□□□□ -0.93
USP35-207ENST00000530546 NDUFS7O75251 213 aa9.22□□□□□ -0.93
USP35-207ENST00000530546 CD24P25063 80 aa9.22□□□□□ -0.93
USP35-207ENST00000530546 ATP5L2Q7Z4Y8 100 aa9.22□□□□□ -0.93
USP35-207ENST00000530546 OR1N2Q8NGR9 330 aa9.22□□□□□ -0.93
USP35-207ENST00000530546 A0A1W2PPR1 153 aa9.21□□□□□ -0.93
USP35-207ENST00000530546 LIPFP07098 398 aa9.21□□□□□ -0.93
USP35-207ENST00000530546 OR5AL1P0C617 328 aa9.21□□□□□ -0.93
USP35-207ENST00000530546 RPL27AP46776 148 aaKnown RBP9.21□□□□□ -0.93
USP35-207ENST00000530546 SUB1P53999 127 aaKnown RBP eCLIP9.21□□□□□ -0.93
USP35-207ENST00000530546 PLGLAQ15195 96 aa9.21□□□□□ -0.93
USP35-207ENST00000530546 MRGPRG-AS1Q2M3A8 158 aa9.21□□□□□ -0.93
USP35-207ENST00000530546 FAM231DQ6ZW35 169 aa9.21□□□□□ -0.93
USP35-207ENST00000530546 OR5A1Q8NGJ0 315 aa9.21□□□□□ -0.93
USP35-207ENST00000530546 A0A087X0K7 114 aa9.21□□□□□ -0.94
USP35-207ENST00000530546 A6NDN8 102 aa9.21□□□□□ -0.94
USP35-207ENST00000530546 MFAP2P55001 183 aa9.21□□□□□ -0.94
USP35-207ENST00000530546 ATP5IP56385 69 aaPredicted RBP9.21□□□□□ -0.94
USP35-207ENST00000530546 ITPR1Q14643 2758 aa9.21□□□□□ -0.94
USP35-207ENST00000530546 ABCA1O95477 2261 aa9.21□□□□□ -0.94
USP35-207ENST00000530546 SPTAN1Q13813 2472 aaKnown RBP9.21□□□□□ -0.94
USP35-207ENST00000530546 LEPROTL1O95214 131 aa9.21□□□□□ -0.94
USP35-207ENST00000530546 MGST1P10620 155 aaKnown RBP9.21□□□□□ -0.94
USP35-207ENST00000530546 HTR1DP28221 377 aa9.21□□□□□ -0.94
USP35-207ENST00000530546 MORN5Q5VZ52 161 aa9.21□□□□□ -0.94
USP35-207ENST00000530546 RUSC1-AS1Q66K80 236 aa9.21□□□□□ -0.94
USP35-207ENST00000530546 MBD6Q96DN6 1003 aa9.21□□□□□ -0.94
USP35-207ENST00000530546 UBTD1Q9HAC8 227 aa9.21□□□□□ -0.94
USP35-207ENST00000530546 MOSP00540 346 aa9.2□□□□□ -0.94
USP35-207ENST00000530546 COX8AP10176 69 aa9.2□□□□□ -0.94
USP35-207ENST00000530546 TMEM97Q5BJF2 176 aa9.2□□□□□ -0.94
USP35-207ENST00000530546 C11orf71Q6IPW1 123 aa9.2□□□□□ -0.94
USP35-207ENST00000530546 BPIFA4PQ86YQ2 179 aa9.2□□□□□ -0.94
USP35-207ENST00000530546 CACNG8Q8WXS5 425 aa9.2□□□□□ -0.94
USP35-207ENST00000530546 GRAMD2BQ96HH9 432 aa9.2□□□□□ -0.94
USP35-207ENST00000530546 SIGLEC9Q9Y336 463 aa9.2□□□□□ -0.94
USP35-207ENST00000530546 PIEZO1Q92508 2521 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms