RNA–Protein interactions for RNA: ENST00000530516.1

NUP98-218, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 391 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-218ENST00000530516 CCL4P13236 92 aa-0.06□□□□□ -2.42
NUP98-218ENST00000530516 RANP62826 216 aaKnown RBP-0.06□□□□□ -2.42
NUP98-218ENST00000530516 HIST1H3AP68431 136 aa-0.06□□□□□ -2.42
NUP98-218ENST00000530516 H3F3AP84243 136 aa-0.06□□□□□ -2.42
NUP98-218ENST00000530516 EDDM3AQ14507 147 aa-0.06□□□□□ -2.42
NUP98-218ENST00000530516 BCL2L15Q5TBC7 163 aa-0.06□□□□□ -2.42
NUP98-218ENST00000530516 SPINK6Q6UWN8 80 aa-0.06□□□□□ -2.42
NUP98-218ENST00000530516 OR5AS1Q8N127 324 aa-0.06□□□□□ -2.42
NUP98-218ENST00000530516 OR10K1Q8NGX5 313 aa-0.06□□□□□ -2.42
NUP98-218ENST00000530516 SLC25A40Q8TBP6 338 aa-0.06□□□□□ -2.42
NUP98-218ENST00000530516 MUCL1Q96DR8 90 aa-0.06□□□□□ -2.42
NUP98-218ENST00000530516 SLC25A21Q9BQT8 299 aaPredicted RBP-0.06□□□□□ -2.42
NUP98-218ENST00000530516 TMEM126AQ9H061 195 aa-0.06□□□□□ -2.42
NUP98-218ENST00000530516 GLTPQ9NZD2 209 aa-0.06□□□□□ -2.42
NUP98-218ENST00000530516 NCAPD3P42695 1498 aa-0.06□□□□□ -2.42
NUP98-218ENST00000530516 KMT2CQ8NEZ4 4911 aaKnown RBP-0.06□□□□□ -2.42
NUP98-218ENST00000530516 HYDINQ4G0P3 5121 aa-0.06□□□□□ -2.42
NUP98-218ENST00000530516 PCLOQ9Y6V0 5065 aa-0.07□□□□□ -2.42
NUP98-218ENST00000530516 A0A087WSZ3 146 aa-0.07□□□□□ -2.42
NUP98-218ENST00000530516 KPNA3O00505 521 aaPredicted RBP-0.07□□□□□ -2.42
NUP98-218ENST00000530516 PDE6DO43924 150 aa-0.07□□□□□ -2.42
NUP98-218ENST00000530516 GGCTO75223 188 aaKnown RBP-0.07□□□□□ -2.42
NUP98-218ENST00000530516 PPYP01298 95 aa-0.07□□□□□ -2.42
NUP98-218ENST00000530516 QRFPP83859 136 aa-0.07□□□□□ -2.42
NUP98-218ENST00000530516 CDK6Q00534 326 aa-0.07□□□□□ -2.42
NUP98-218ENST00000530516 GLIPR1L1Q6UWM5 242 aa-0.07□□□□□ -2.42
NUP98-218ENST00000530516 PDZD9Q8IXQ8 264 aa-0.07□□□□□ -2.42
NUP98-218ENST00000530516 OR51A2Q8NGJ7 313 aa-0.07□□□□□ -2.42
NUP98-218ENST00000530516 OR10AG1Q8NH19 301 aa-0.07□□□□□ -2.42
NUP98-218ENST00000530516 ZC2HC1AQ96GY0 325 aa-0.07□□□□□ -2.42
NUP98-218ENST00000530516 CCDC42Q96M95 316 aa-0.07□□□□□ -2.42
NUP98-218ENST00000530516 WFDC10AQ9H1F0 79 aa-0.07□□□□□ -2.42
NUP98-218ENST00000530516 OR52A1Q9UKL2 312 aa-0.07□□□□□ -2.42
NUP98-218ENST00000530516 BCL9O00512 1426 aa-0.07□□□□□ -2.42
NUP98-218ENST00000530516 NEBP20929 6669 aa-0.07□□□□□ -2.42
NUP98-218ENST00000530516 RFX7Q2KHR2 1363 aa-0.07□□□□□ -2.42
NUP98-218ENST00000530516 TPRP12270 2363 aaKnown RBP-0.08□□□□□ -2.42
NUP98-218ENST00000530516 ZFYVE26Q68DK2 2539 aa-0.08□□□□□ -2.42
NUP98-218ENST00000530516 MUC2Q02817 5179 aa-0.08□□□□□ -2.42
NUP98-218ENST00000530516 COL7A1Q02388 2944 aa-0.08□□□□□ -2.42
NUP98-218ENST00000530516 MYH2Q9UKX2 1941 aa-0.08□□□□□ -2.42
NUP98-218ENST00000530516 A0A087WUJ7 227 aa-0.08□□□□□ -2.42
NUP98-218ENST00000530516 TRAV4A0A0B4J268 109 aa-0.08□□□□□ -2.42
NUP98-218ENST00000530516 NUPR2A6NF83 97 aa-0.08□□□□□ -2.42
NUP98-218ENST00000530516 C5orf67F2Z3F1 127 aa-0.08□□□□□ -2.42
NUP98-218ENST00000530516 OR7C1O76099 320 aaPredicted RBP-0.08□□□□□ -2.42
NUP98-218ENST00000530516 SRIP30626 198 aa-0.08□□□□□ -2.42
NUP98-218ENST00000530516 CEBPGP53567 150 aa-0.08□□□□□ -2.42
NUP98-218ENST00000530516 PIGPP57054 158 aa-0.08□□□□□ -2.42
NUP98-218ENST00000530516 VBP1P61758 197 aa-0.08□□□□□ -2.42
NUP98-218ENST00000530516 UBE2BP63146 152 aa-0.08□□□□□ -2.42
NUP98-218ENST00000530516 RRN3P1Q2M238 152 aa-0.08□□□□□ -2.42
NUP98-218ENST00000530516 TMEM97Q5BJF2 176 aa-0.08□□□□□ -2.42
NUP98-218ENST00000530516 TRAPPC5Q8IUR0 188 aa-0.08□□□□□ -2.42
NUP98-218ENST00000530516 Q8TAT8 98 aa-0.08□□□□□ -2.42
NUP98-218ENST00000530516 DDI1Q8WTU0 396 aa-0.08□□□□□ -2.42
NUP98-218ENST00000530516 CCDC94Q9BW85 323 aaPredicted RBP-0.08□□□□□ -2.42
NUP98-218ENST00000530516 UBR4Q5T4S7 5183 aa-0.08□□□□□ -2.42
NUP98-218ENST00000530516 KIAA1549LQ6ZVL6 1849 aa-0.08□□□□□ -2.42
NUP98-218ENST00000530516 RBBP6Q7Z6E9 1792 aaKnown RBP-0.09□□□□□ -2.42
NUP98-218ENST00000530516 RYR3Q15413 4870 aa-0.09□□□□□ -2.42
NUP98-218ENST00000530516 ANK1P16157 1881 aa-0.09□□□□□ -2.42
NUP98-218ENST00000530516 TRBV19A0A075B6N1 114 aa-0.09□□□□□ -2.42
NUP98-218ENST00000530516 TRAV23DV6A0A075B6W5 121 aa-0.09□□□□□ -2.42
NUP98-218ENST00000530516 M0R233 179 aa-0.09□□□□□ -2.42
NUP98-218ENST00000530516 RPP14O95059 124 aaKnown RBP-0.09□□□□□ -2.42
NUP98-218ENST00000530516 OR10J4P0C629 311 aa-0.09□□□□□ -2.42
NUP98-218ENST00000530516 ERP29P30040 261 aaKnown RBP-0.09□□□□□ -2.42
NUP98-218ENST00000530516 PTRHD1Q6GMV3 140 aaKnown RBP-0.09□□□□□ -2.42
NUP98-218ENST00000530516 Q6ZQY7 126 aa-0.09□□□□□ -2.42
NUP98-218ENST00000530516 GNPDA2Q8TDQ7 276 aa-0.09□□□□□ -2.42
NUP98-218ENST00000530516 IMUPQ9GZP8 106 aa-0.09□□□□□ -2.42
NUP98-218ENST00000530516 TCEAL2Q9H3H9 227 aaPredicted RBP-0.09□□□□□ -2.42
NUP98-218ENST00000530516 UCK1Q9HA47 277 aa-0.09□□□□□ -2.42
NUP98-218ENST00000530516 PARVBQ9HBI1 364 aa-0.09□□□□□ -2.42
NUP98-218ENST00000530516 CTNNBIP1Q9NSA3 81 aaPredicted RBP-0.09□□□□□ -2.42
NUP98-218ENST00000530516 UQCC1Q9NVA1 299 aa-0.09□□□□□ -2.42
NUP98-218ENST00000530516 PRELID3BQ9Y3B1 194 aa-0.09□□□□□ -2.42
NUP98-218ENST00000530516 LRP1Q07954 4544 aaKnown RBP-0.09□□□□□ -2.42
NUP98-218ENST00000530516 NISCHQ9Y2I1 1504 aa-0.09□□□□□ -2.42
NUP98-218ENST00000530516 DMBT1Q9UGM3 2413 aaPredicted RBP-0.09□□□□□ -2.42
NUP98-218ENST00000530516 TRPM7Q96QT4 1865 aa-0.1□□□□□ -2.42
NUP98-218ENST00000530516 ADGBQ8N7X0 1667 aa-0.1□□□□□ -2.43
NUP98-218ENST00000530516 TRAV27A0A087WT01 109 aa-0.1□□□□□ -2.43
NUP98-218ENST00000530516 FAM159BA6NKW6 160 aa-0.1□□□□□ -2.43
NUP98-218ENST00000530516 ZNF727A8MUV8 499 aa-0.1□□□□□ -2.43
NUP98-218ENST00000530516 HAND1O96004 215 aa-0.1□□□□□ -2.43
NUP98-218ENST00000530516 RAB5CP51148 216 aa-0.1□□□□□ -2.43
NUP98-218ENST00000530516 MYL6P60660 151 aa-0.1□□□□□ -2.43
NUP98-218ENST00000530516 EIF5AL1Q6IS14 154 aaKnown RBP-0.1□□□□□ -2.43
NUP98-218ENST00000530516 ARPINQ7Z6K5 226 aa-0.1□□□□□ -2.43
NUP98-218ENST00000530516 OR5D16Q8NGK9 328 aa-0.1□□□□□ -2.43
NUP98-218ENST00000530516 STAG3L4Q8TBR4 150 aa-0.1□□□□□ -2.43
NUP98-218ENST00000530516 POP5Q969H6 163 aaKnown RBP-0.1□□□□□ -2.43
NUP98-218ENST00000530516 RAB37Q96AX2 223 aa-0.1□□□□□ -2.43
NUP98-218ENST00000530516 TEX37Q96LM6 180 aa-0.1□□□□□ -2.43
NUP98-218ENST00000530516 RNASE7Q9H1E1 156 aaKnown RBP-0.1□□□□□ -2.43
NUP98-218ENST00000530516 OTOGQ6ZRI0 2925 aa-0.1□□□□□ -2.43
NUP98-218ENST00000530516 MAP2P11137 1827 aaKnown RBP-0.1□□□□□ -2.43
NUP98-218ENST00000530516 AFDNP55196 1824 aaKnown RBP-0.1□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms