RNA–Protein interactions for RNA: ENST00000530041.5

USP47-209, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 3

Gene USP47, Length 767 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-209ENST00000530041 TMEM256Q8N2U0 113 aa3.03□□□□□ -1.92
USP47-209ENST00000530041 OR5A2Q8NGI9 324 aa3.03□□□□□ -1.92
USP47-209ENST00000530041 OR5P3Q8WZ94 311 aa3.03□□□□□ -1.92
USP47-209ENST00000530041 CLDN23Q96B33 292 aa3.03□□□□□ -1.92
USP47-209ENST00000530041 RPUSD4Q96CM3 377 aaKnown RBP3.03□□□□□ -1.92
USP47-209ENST00000530041 XCL2Q9UBD3 114 aa3.03□□□□□ -1.92
USP47-209ENST00000530041 TRAPPC1Q9Y5R8 145 aa3.03□□□□□ -1.92
USP47-209ENST00000530041 LY96Q9Y6Y9 160 aa3.03□□□□□ -1.92
USP47-209ENST00000530041 TNRC6AQ8NDV7 1962 aaKnown RBP3.03□□□□□ -1.92
USP47-209ENST00000530041 IGHV3-15A0A0B4J1V0 119 aa3.02□□□□□ -1.93
USP47-209ENST00000530041 TRAV39A0A0B4J263 110 aa3.02□□□□□ -1.93
USP47-209ENST00000530041 UBE2L5PA0A1B0GUS4 154 aa3.02□□□□□ -1.93
USP47-209ENST00000530041 GJE1A6NN92 205 aa3.02□□□□□ -1.93
USP47-209ENST00000530041 ZNF705FA8MVS1 300 aaPredicted RBP3.02□□□□□ -1.93
USP47-209ENST00000530041 TRAPPC2LH3BP13 241 aa3.02□□□□□ -1.93
USP47-209ENST00000530041 KRASP01116 189 aa3.02□□□□□ -1.93
USP47-209ENST00000530041 REG1AP05451 166 aa3.02□□□□□ -1.93
USP47-209ENST00000530041 ZNF705DP0CH99 300 aaPredicted RBP3.02□□□□□ -1.93
USP47-209ENST00000530041 ZNF705BP0CI00 300 aaPredicted RBP3.02□□□□□ -1.93
USP47-209ENST00000530041 TDGF1P13385 188 aa3.02□□□□□ -1.93
USP47-209ENST00000530041 CTRLP40313 264 aa3.02□□□□□ -1.93
USP47-209ENST00000530041 TPPP2P59282 170 aa3.02□□□□□ -1.93
USP47-209ENST00000530041 KRTAP10-1P60331 282 aa3.02□□□□□ -1.93
USP47-209ENST00000530041 RPL18AQ02543 176 aaKnown RBP3.02□□□□□ -1.93
USP47-209ENST00000530041 PRR4Q16378 134 aa3.02□□□□□ -1.93
USP47-209ENST00000530041 CEACAM16Q2WEN9 425 aa3.02□□□□□ -1.93
USP47-209ENST00000530041 CEACAM21Q3KPI0 293 aa3.02□□□□□ -1.93
USP47-209ENST00000530041 SPANXN5Q5MJ07 72 aa3.02□□□□□ -1.93
USP47-209ENST00000530041 LCE1CQ5T751 118 aa3.02□□□□□ -1.93
USP47-209ENST00000530041 LCE1BQ5T7P3 118 aa3.02□□□□□ -1.93
USP47-209ENST00000530041 FAM78BQ5VT40 261 aa3.02□□□□□ -1.93
USP47-209ENST00000530041 FBXW9Q5XUX1 488 aa3.02□□□□□ -1.93
USP47-209ENST00000530041 LCN12Q6JVE5 192 aa3.02□□□□□ -1.93
USP47-209ENST00000530041 IGFL3Q6UXB1 125 aa3.02□□□□□ -1.93
USP47-209ENST00000530041 ZNF705AQ6ZN79 300 aaPredicted RBP3.02□□□□□ -1.93
USP47-209ENST00000530041 AAED1Q7RTV5 226 aa3.02□□□□□ -1.93
USP47-209ENST00000530041 TCTEX1D1Q8N7M0 179 aa3.02□□□□□ -1.93
USP47-209ENST00000530041 Q8N976 141 aa3.02□□□□□ -1.93
USP47-209ENST00000530041 OR10G9Q8NGN4 311 aa3.02□□□□□ -1.93
USP47-209ENST00000530041 OR51H1Q8NH63 302 aa3.02□□□□□ -1.93
USP47-209ENST00000530041 CMTM2Q8TAZ6 248 aa3.02□□□□□ -1.93
USP47-209ENST00000530041 RDH5Q92781 318 aa3.02□□□□□ -1.93
USP47-209ENST00000530041 APOBEC3DQ96AK3 386 aaPredicted RBP3.02□□□□□ -1.93
USP47-209ENST00000530041 IMMP1LQ96LU5 166 aa3.02□□□□□ -1.93
USP47-209ENST00000530041 KIR2DL4Q99706 377 aa3.02□□□□□ -1.93
USP47-209ENST00000530041 LINC00470Q9BZP3 86 aa3.02□□□□□ -1.93
USP47-209ENST00000530041 OR2J1Q9GZK6 312 aa3.02□□□□□ -1.93
USP47-209ENST00000530041 SLC25A22Q9H936 323 aa3.02□□□□□ -1.93
USP47-209ENST00000530041 KCNIP2Q9NS61 270 aa3.02□□□□□ -1.93
USP47-209ENST00000530041 CLCF1Q9UBD9 225 aa3.02□□□□□ -1.93
USP47-209ENST00000530041 KLF12Q9Y4X4 402 aa3.02□□□□□ -1.93
USP47-209ENST00000530041 OR51B2Q9Y5P1 312 aa3.02□□□□□ -1.93
USP47-209ENST00000530041 SLC25A15Q9Y619 301 aa3.02□□□□□ -1.93
USP47-209ENST00000530041 KIAA2026Q5HYC2 2103 aa3.02□□□□□ -1.93
USP47-209ENST00000530041 PCNTO95613 3336 aa3.02□□□□□ -1.93
USP47-209ENST00000530041 RTTNQ86VV8 2226 aa3.01□□□□□ -1.93
USP47-209ENST00000530041 TNRC6BQ9UPQ9 1833 aaKnown RBP3.01□□□□□ -1.93
USP47-209ENST00000530041 IGHV1-45A0A0A0MS14 117 aa3.01□□□□□ -1.93
USP47-209ENST00000530041 C11orf94C9JXX5 98 aa3.01□□□□□ -1.93
USP47-209ENST00000530041 C17orf112F2Z3M2 114 aa3.01□□□□□ -1.93
USP47-209ENST00000530041 H7C1H1 209 aa3.01□□□□□ -1.93
USP47-209ENST00000530041 J3QT63 122 aa3.01□□□□□ -1.93
USP47-209ENST00000530041 RBFOX2O43251 390 aaKnown RBP eCLIP3.01□□□□□ -1.93
USP47-209ENST00000530041 SYNGR1O43759 233 aa3.01□□□□□ -1.93
USP47-209ENST00000530041 OR10J4P0C629 311 aa3.01□□□□□ -1.93
USP47-209ENST00000530041 CCL3P10147 92 aa3.01□□□□□ -1.93
USP47-209ENST00000530041 UBE2E1P51965 193 aa3.01□□□□□ -1.93
USP47-209ENST00000530041 RIPPLY3P57055 190 aa3.01□□□□□ -1.93
USP47-209ENST00000530041 TFF3Q07654 80 aa3.01□□□□□ -1.93
USP47-209ENST00000530041 RAB31Q13636 194 aa3.01□□□□□ -1.93
USP47-209ENST00000530041 GUSBP1Q15486 140 aa3.01□□□□□ -1.93
USP47-209ENST00000530041 POU2AF1Q16633 256 aa3.01□□□□□ -1.93
USP47-209ENST00000530041 TMEM183BQ1AE95 376 aa3.01□□□□□ -1.93
USP47-209ENST00000530041 CLEC12BQ2HXU8 276 aa3.01□□□□□ -1.93
USP47-209ENST00000530041 COX19Q49B96 90 aa3.01□□□□□ -1.93
USP47-209ENST00000530041 SAPCD1Q5SSQ6 148 aa3.01□□□□□ -1.93
USP47-209ENST00000530041 COL5A1-AS1Q5SY13 56 aa3.01□□□□□ -1.93
USP47-209ENST00000530041 CYB5R2Q6BCY4 276 aa3.01□□□□□ -1.93
USP47-209ENST00000530041 Q6ZS52 159 aa3.01□□□□□ -1.93
USP47-209ENST00000530041 FAM19A1Q7Z5A9 133 aa3.01□□□□□ -1.93
USP47-209ENST00000530041 RPS19BP1Q86WX3 136 aaKnown RBP3.01□□□□□ -1.93
USP47-209ENST00000530041 C1orf174Q8IYL3 243 aa3.01□□□□□ -1.93
USP47-209ENST00000530041 CEND1Q8N111 149 aa3.01□□□□□ -1.93
USP47-209ENST00000530041 SLC25A45Q8N413 288 aa3.01□□□□□ -1.93
USP47-209ENST00000530041 PNKDQ8N490 385 aa3.01□□□□□ -1.93
USP47-209ENST00000530041 DRAM1Q8N682 238 aa3.01□□□□□ -1.93
USP47-209ENST00000530041 TSTD1Q8NFU3 115 aa3.01□□□□□ -1.93
USP47-209ENST00000530041 OR10P1Q8NGE3 313 aa3.01□□□□□ -1.93
USP47-209ENST00000530041 OR4B1Q8NGF8 309 aa3.01□□□□□ -1.93
USP47-209ENST00000530041 ORAOV1Q8WV07 137 aa3.01□□□□□ -1.93
USP47-209ENST00000530041 PSMF1Q92530 271 aa3.01□□□□□ -1.93
USP47-209ENST00000530041 FLYWCH2Q96CP2 140 aaKnown RBP3.01□□□□□ -1.93
USP47-209ENST00000530041 SFRP2Q96HF1 295 aa3.01□□□□□ -1.93
USP47-209ENST00000530041 UBE2E2Q96LR5 201 aa3.01□□□□□ -1.93
USP47-209ENST00000530041 WFIKKN1Q96NZ8 548 aa3.01□□□□□ -1.93
USP47-209ENST00000530041 CIB3Q96Q77 187 aaPredicted RBP3.01□□□□□ -1.93
USP47-209ENST00000530041 NPCDR1Q9BY65 106 aa3.01□□□□□ -1.93
USP47-209ENST00000530041 Q9H3A6 140 aa3.01□□□□□ -1.93
USP47-209ENST00000530041 ASCL3Q9NQ33 180 aa3.01□□□□□ -1.93
USP47-209ENST00000530041 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms